RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 ARL9Q6T311 187 aa10.2□□□□□ -0.78
UPF3B-204ENST00000619445 LRP11Q86VZ4 500 aa10.2□□□□□ -0.78
UPF3B-204ENST00000619445 CALHM3Q86XJ0 350 aa10.2□□□□□ -0.78
UPF3B-204ENST00000619445 WDFY1Q8IWB7 410 aa10.2□□□□□ -0.78
UPF3B-204ENST00000619445 OR4D11Q8NGI4 311 aa10.2□□□□□ -0.78
UPF3B-204ENST00000619445 CLDND2Q8NHS1 167 aa10.2□□□□□ -0.78
UPF3B-204ENST00000619445 LZICQ8WZA0 190 aa10.2□□□□□ -0.78
UPF3B-204ENST00000619445 RBP7Q96R05 134 aa10.2□□□□□ -0.78
UPF3B-204ENST00000619445 ZNF347Q96SE7 839 aa10.2□□□□□ -0.78
UPF3B-204ENST00000619445 WACQ9BTA9 647 aa10.2□□□□□ -0.78
UPF3B-204ENST00000619445 ALG12Q9BV10 488 aa10.2□□□□□ -0.78
UPF3B-204ENST00000619445 TXNIPQ9H3M7 391 aa10.2□□□□□ -0.78
UPF3B-204ENST00000619445 DECR2Q9NUI1 292 aa10.2□□□□□ -0.78
UPF3B-204ENST00000619445 HIF1ANQ9NWT6 349 aa10.2□□□□□ -0.78
UPF3B-204ENST00000619445 PLSCR5A0PG75 271 aa10.19□□□□□ -0.78
UPF3B-204ENST00000619445 TRMUO75648 421 aaKnown RBP10.19□□□□□ -0.78
UPF3B-204ENST00000619445 RP2O75695 350 aa10.19□□□□□ -0.78
UPF3B-204ENST00000619445 IGHV3-13P01766 116 aa10.19□□□□□ -0.78
UPF3B-204ENST00000619445 F13BP05160 661 aa10.19□□□□□ -0.78
UPF3B-204ENST00000619445 MMP7P09237 267 aaPredicted RBP10.19□□□□□ -0.78
UPF3B-204ENST00000619445 FAM157BP0CG42 384 aa10.19□□□□□ -0.78
UPF3B-204ENST00000619445 GAAP10253 952 aa10.19□□□□□ -0.78
UPF3B-204ENST00000619445 NAT2P11245 290 aa10.19□□□□□ -0.78
UPF3B-204ENST00000619445 COL8A2P25067 703 aa10.19□□□□□ -0.78
UPF3B-204ENST00000619445 STOMP27105 288 aa10.19□□□□□ -0.78
UPF3B-204ENST00000619445 GCH1P30793 250 aa10.19□□□□□ -0.78
UPF3B-204ENST00000619445 HFEQ30201 348 aa10.19□□□□□ -0.78
UPF3B-204ENST00000619445 THEM4Q5T1C6 240 aa10.19□□□□□ -0.78
UPF3B-204ENST00000619445 ARMC4Q5T2S8 1044 aa10.19□□□□□ -0.78
UPF3B-204ENST00000619445 RINLQ6ZS11 566 aa10.19□□□□□ -0.78
UPF3B-204ENST00000619445 ZER1Q7Z7L7 766 aa10.19□□□□□ -0.78
UPF3B-204ENST00000619445 SYT14Q8NB59 555 aa10.19□□□□□ -0.78
UPF3B-204ENST00000619445 FGFBP3Q8TAT2 258 aa10.19□□□□□ -0.78
UPF3B-204ENST00000619445 ZNF418Q8TF45 676 aaPredicted RBP10.19□□□□□ -0.78
UPF3B-204ENST00000619445 ELMOD3Q96FG2 381 aa10.19□□□□□ -0.78
UPF3B-204ENST00000619445 DIRC2Q96SL1 478 aa10.19□□□□□ -0.78
UPF3B-204ENST00000619445 NDEL1Q9GZM8 345 aa10.19□□□□□ -0.78
UPF3B-204ENST00000619445 EGLN1Q9GZT9 426 aa10.19□□□□□ -0.78
UPF3B-204ENST00000619445 MYEF2Q9P2K5 600 aaKnown RBP10.19□□□□□ -0.78
UPF3B-204ENST00000619445 FZR1Q9UM11 496 aa10.19□□□□□ -0.78
UPF3B-204ENST00000619445 HIF3AQ9Y2N7 669 aa10.19□□□□□ -0.78
UPF3B-204ENST00000619445 ANK2Q01484 3957 aa10.19□□□□□ -0.78
UPF3B-204ENST00000619445 IGHV1-69-2A0A0G2JMI3 117 aa10.18□□□□□ -0.78
UPF3B-204ENST00000619445 A6NIZ1 184 aa10.18□□□□□ -0.78
UPF3B-204ENST00000619445 CLDN25C9JDP6 229 aa10.18□□□□□ -0.78
UPF3B-204ENST00000619445 FBP2O00757 339 aa10.18□□□□□ -0.78
UPF3B-204ENST00000619445 MRASO14807 208 aa10.18□□□□□ -0.78
UPF3B-204ENST00000619445 SLC22A2O15244 555 aa10.18□□□□□ -0.78
UPF3B-204ENST00000619445 TPD52L2O43399 206 aaKnown RBP10.18□□□□□ -0.78
UPF3B-204ENST00000619445 NCR1O76036 304 aa10.18□□□□□ -0.78
UPF3B-204ENST00000619445 PNPP00491 289 aa10.18□□□□□ -0.78
UPF3B-204ENST00000619445 TUBG1P23258 451 aa10.18□□□□□ -0.78
UPF3B-204ENST00000619445 GATA3P23771 443 aa10.18□□□□□ -0.78
UPF3B-204ENST00000619445 AQP2P41181 271 aa10.18□□□□□ -0.78
UPF3B-204ENST00000619445 GDI2P50395 445 aaKnown RBP10.18□□□□□ -0.78
UPF3B-204ENST00000619445 CRYBA2P53672 197 aa10.18□□□□□ -0.78
UPF3B-204ENST00000619445 RAP1BP61224 184 aa10.18□□□□□ -0.78
UPF3B-204ENST00000619445 RAP1AP62834 184 aa10.18□□□□□ -0.78
UPF3B-204ENST00000619445 CCL8P80075 99 aa10.18□□□□□ -0.78
UPF3B-204ENST00000619445 CD47Q08722 323 aa10.18□□□□□ -0.78
UPF3B-204ENST00000619445 ALG10Q5BKT4 473 aa10.18□□□□□ -0.78
UPF3B-204ENST00000619445 RABL3Q5HYI8 236 aa10.18□□□□□ -0.78
UPF3B-204ENST00000619445 PABPC1L2AQ5JQF8 200 aa10.18□□□□□ -0.78
UPF3B-204ENST00000619445 FAM27BQ5VT28 67 aa10.18□□□□□ -0.78
UPF3B-204ENST00000619445 ACSM5Q6NUN0 579 aa10.18□□□□□ -0.78
UPF3B-204ENST00000619445 ARPINQ7Z6K5 226 aa10.18□□□□□ -0.78
UPF3B-204ENST00000619445 TSPYL5Q86VY4 417 aaPredicted RBP10.18□□□□□ -0.78
UPF3B-204ENST00000619445 MEX3DQ86XN8 651 aaKnown RBP10.18□□□□□ -0.78
UPF3B-204ENST00000619445 LRRC18Q8N456 261 aa10.18□□□□□ -0.78
UPF3B-204ENST00000619445 OR1J1Q8NGS3 322 aa10.18□□□□□ -0.78
UPF3B-204ENST00000619445 TMEM255BQ8WV15 326 aa10.18□□□□□ -0.78
UPF3B-204ENST00000619445 RAB1CQ92928 201 aa10.18□□□□□ -0.78
UPF3B-204ENST00000619445 YIPF5Q969M3 257 aa10.18□□□□□ -0.78
UPF3B-204ENST00000619445 THOC1Q96FV9 657 aaKnown RBP10.18□□□□□ -0.78
UPF3B-204ENST00000619445 LRRC37BQ96QE4 947 aa10.18□□□□□ -0.78
UPF3B-204ENST00000619445 JMJD8Q96S16 334 aa10.18□□□□□ -0.78
UPF3B-204ENST00000619445 TMEM120AQ9BXJ8 343 aa10.18□□□□□ -0.78
UPF3B-204ENST00000619445 OCEL1Q9H607 264 aa10.18□□□□□ -0.78
UPF3B-204ENST00000619445 SAP30LQ9HAJ7 183 aa10.18□□□□□ -0.78
UPF3B-204ENST00000619445 ELOVL3Q9HB03 270 aa10.18□□□□□ -0.78
UPF3B-204ENST00000619445 TUBG2Q9NRH3 451 aa10.18□□□□□ -0.78
UPF3B-204ENST00000619445 A0A0G2JMP0 313 aa10.17□□□□□ -0.78
UPF3B-204ENST00000619445 A0A0X1KG70 313 aa10.17□□□□□ -0.78
UPF3B-204ENST00000619445 FAM220BPB1ANY3 271 aa10.17□□□□□ -0.78
UPF3B-204ENST00000619445 J3QLI3 93 aa10.17□□□□□ -0.78
UPF3B-204ENST00000619445 FXYD1O00168 92 aa10.17□□□□□ -0.78
UPF3B-204ENST00000619445 ICMTO60725 284 aa10.17□□□□□ -0.78
UPF3B-204ENST00000619445 CLPTM1O96005 669 aa10.17□□□□□ -0.78
UPF3B-204ENST00000619445 IGHMP01871 453 aa10.17□□□□□ -0.78
UPF3B-204ENST00000619445 ADH4P08319 380 aa10.17□□□□□ -0.78
UPF3B-204ENST00000619445 CST2P09228 141 aa10.17□□□□□ -0.78
UPF3B-204ENST00000619445 KDELR2P33947 212 aa10.17□□□□□ -0.78
UPF3B-204ENST00000619445 SLC9A3P48764 834 aa10.17□□□□□ -0.78
UPF3B-204ENST00000619445 ZNF81P51508 661 aa10.17□□□□□ -0.78
UPF3B-204ENST00000619445 ARHGDIAP52565 204 aa10.17□□□□□ -0.78
UPF3B-204ENST00000619445 ARFIP2P53365 341 aa10.17□□□□□ -0.78
UPF3B-204ENST00000619445 RPL27P61353 136 aaKnown RBP10.17□□□□□ -0.78
UPF3B-204ENST00000619445 LMO4P61968 165 aa10.17□□□□□ -0.78
UPF3B-204ENST00000619445 RUNX1T1Q06455 604 aa10.17□□□□□ -0.78
UPF3B-204ENST00000619445 PIN1Q13526 163 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms