RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 MAGEB1P43366 347 aa17.02■□□□□ 0.32
PSPC1-206ENST00000619300 SCN1BQ07699 218 aa17.02■□□□□ 0.32
PSPC1-206ENST00000619300 RASGEF1BQ0VAM2 473 aa17.02■□□□□ 0.32
PSPC1-206ENST00000619300 EIF2B1Q14232 305 aaKnown RBP17.02■□□□□ 0.32
PSPC1-206ENST00000619300 TRIP6Q15654 476 aaKnown RBP17.02■□□□□ 0.32
PSPC1-206ENST00000619300 Q499Y3 187 aa17.02■□□□□ 0.32
PSPC1-206ENST00000619300 AGAP7PQ5VUJ5 663 aa17.02■□□□□ 0.32
PSPC1-206ENST00000619300 RAET1LQ5VY80 246 aa17.02■□□□□ 0.32
PSPC1-206ENST00000619300 GPAT4Q86UL3 456 aa17.02■□□□□ 0.32
PSPC1-206ENST00000619300 LRRC28Q86X40 367 aaPredicted RBP17.02■□□□□ 0.32
PSPC1-206ENST00000619300 PRSS35Q8N3Z0 413 aa17.02■□□□□ 0.32
PSPC1-206ENST00000619300 B3GAT2Q9NPZ5 323 aa17.02■□□□□ 0.32
PSPC1-206ENST00000619300 CYSLTR2Q9NS75 346 aa17.02■□□□□ 0.32
PSPC1-206ENST00000619300 KLHL9Q9P2J3 617 aa17.02■□□□□ 0.32
PSPC1-206ENST00000619300 AK6Q9Y3D8 172 aaKnown RBP17.02■□□□□ 0.32
PSPC1-206ENST00000619300 A0A1W2PQ09 198 aa17.01■□□□□ 0.31
PSPC1-206ENST00000619300 OR2M5A3KFT3 312 aa17.01■□□□□ 0.31
PSPC1-206ENST00000619300 AQP7P3A6NL99 342 aa17.01■□□□□ 0.31
PSPC1-206ENST00000619300 TMEM212A6NML5 194 aa17.01■□□□□ 0.31
PSPC1-206ENST00000619300 ZNF432O94892 652 aa17.01■□□□□ 0.31
PSPC1-206ENST00000619300 PMS2P2O95744 297 aa17.01■□□□□ 0.31
PSPC1-206ENST00000619300 SPNP16150 400 aa17.01■□□□□ 0.31
PSPC1-206ENST00000619300 MADCAM1Q13477 382 aa17.01■□□□□ 0.31
PSPC1-206ENST00000619300 PCK2Q16822 640 aa17.01■□□□□ 0.31
PSPC1-206ENST00000619300 TEX30Q5JUR7 227 aa17.01■□□□□ 0.31
PSPC1-206ENST00000619300 THEM4Q5T1C6 240 aa17.01■□□□□ 0.31
PSPC1-206ENST00000619300 ZNF554Q86TJ5 538 aa17.01■□□□□ 0.31
PSPC1-206ENST00000619300 RNF128Q8TEB7 428 aa17.01■□□□□ 0.31
PSPC1-206ENST00000619300 SMAD5Q99717 465 aaKnown RBP17.01■□□□□ 0.31
PSPC1-206ENST00000619300 COMMD4Q9H0A8 199 aa17.01■□□□□ 0.31
PSPC1-206ENST00000619300 MALT1Q9UDY8 824 aa17.01■□□□□ 0.31
PSPC1-206ENST00000619300 KMT2EQ8IZD2 1858 aa17.01■□□□□ 0.31
PSPC1-206ENST00000619300 EML6Q6ZMW3 1958 aa17.01■□□□□ 0.31
PSPC1-206ENST00000619300 TRBV5-5A0A0J9YX44 114 aa17.01■□□□□ 0.31
PSPC1-206ENST00000619300 TRAF3IP2O43734 574 aaPredicted RBP17.01■□□□□ 0.31
PSPC1-206ENST00000619300 PAHP00439 452 aa17.01■□□□□ 0.31
PSPC1-206ENST00000619300 MAPK3P27361 379 aaPredicted RBP17.01■□□□□ 0.31
PSPC1-206ENST00000619300 RIN1Q13671 783 aa17.01■□□□□ 0.31
PSPC1-206ENST00000619300 IL18Q14116 193 aa17.01■□□□□ 0.31
PSPC1-206ENST00000619300 P2RY14Q15391 338 aa17.01■□□□□ 0.31
PSPC1-206ENST00000619300 KRT77Q7Z794 578 aa17.01■□□□□ 0.31
PSPC1-206ENST00000619300 ZNF676Q8N7Q3 588 aa17.01■□□□□ 0.31
PSPC1-206ENST00000619300 SAMD12Q8N8I0 201 aa17.01■□□□□ 0.31
PSPC1-206ENST00000619300 TRMT10AQ8TBZ6 339 aaKnown RBP17.01■□□□□ 0.31
PSPC1-206ENST00000619300 PSMF1Q92530 271 aa17.01■□□□□ 0.31
PSPC1-206ENST00000619300 SLC25A44Q96H78 314 aaPredicted RBP17.01■□□□□ 0.31
PSPC1-206ENST00000619300 C4orf45Q96LM5 186 aa17.01■□□□□ 0.31
PSPC1-206ENST00000619300 SDK2Q58EX2 2172 aa17■□□□□ 0.31
PSPC1-206ENST00000619300 PDCD5O14737 125 aa17■□□□□ 0.31
PSPC1-206ENST00000619300 TNFSF15O95150 251 aa17■□□□□ 0.31
PSPC1-206ENST00000619300 HRGP04196 525 aa17■□□□□ 0.31
PSPC1-206ENST00000619300 ZNF17P17021 662 aa17■□□□□ 0.31
PSPC1-206ENST00000619300 ATF1P18846 271 aa17■□□□□ 0.31
PSPC1-206ENST00000619300 DNASE1L1P49184 302 aa17■□□□□ 0.31
PSPC1-206ENST00000619300 CCR9P51686 369 aa17■□□□□ 0.31
PSPC1-206ENST00000619300 NUBP1P53384 320 aa17■□□□□ 0.31
PSPC1-206ENST00000619300 CCBE1Q6UXH8 406 aaPredicted RBP17■□□□□ 0.31
PSPC1-206ENST00000619300 HDDC2Q7Z4H3 204 aa17■□□□□ 0.31
PSPC1-206ENST00000619300 GLB1L2Q8IW92 636 aa17■□□□□ 0.31
PSPC1-206ENST00000619300 OR52N5Q8NH56 324 aa17■□□□□ 0.31
PSPC1-206ENST00000619300 OR6X1Q8NH79 312 aa17■□□□□ 0.31
PSPC1-206ENST00000619300 ORAI1Q96D31 301 aa17■□□□□ 0.31
PSPC1-206ENST00000619300 ABRACLQ9P1F3 81 aa17■□□□□ 0.31
PSPC1-206ENST00000619300 EXTL2Q9UBQ6 330 aa17■□□□□ 0.31
PSPC1-206ENST00000619300 TRABD2BA6NFA1 517 aa16.99■□□□□ 0.31
PSPC1-206ENST00000619300 RAD1O60671 282 aa16.99■□□□□ 0.31
PSPC1-206ENST00000619300 RAMP1O60894 148 aa16.99■□□□□ 0.31
PSPC1-206ENST00000619300 AQP8O94778 261 aa16.99■□□□□ 0.31
PSPC1-206ENST00000619300 IGHG1P01857 330 aa16.99■□□□□ 0.31
PSPC1-206ENST00000619300 ZNF43P17038 809 aa16.99■□□□□ 0.31
PSPC1-206ENST00000619300 NPR2P20594 1047 aa16.99■□□□□ 0.31
PSPC1-206ENST00000619300 KIR3DL2P43630 455 aa16.99■□□□□ 0.31
PSPC1-206ENST00000619300 CLRN1P58418 232 aa16.99■□□□□ 0.31
PSPC1-206ENST00000619300 H3F3AP84243 136 aa16.99■□□□□ 0.31
PSPC1-206ENST00000619300 CAMK2DQ13557 499 aa16.99■□□□□ 0.31
PSPC1-206ENST00000619300 CSRP2Q16527 193 aa16.99■□□□□ 0.31
PSPC1-206ENST00000619300 WDR38Q5JTN6 314 aa16.99■□□□□ 0.31
PSPC1-206ENST00000619300 SPATC1Q76KD6 591 aa16.99■□□□□ 0.31
PSPC1-206ENST00000619300 BEST3Q8N1M1 668 aa16.99■□□□□ 0.31
PSPC1-206ENST00000619300 Q8N402 240 aa16.99■□□□□ 0.31
PSPC1-206ENST00000619300 THOC3Q96J01 351 aaKnown RBP16.99■□□□□ 0.31
PSPC1-206ENST00000619300 PIGQQ9BRB3 760 aa16.99■□□□□ 0.31
PSPC1-206ENST00000619300 FAM117AQ9C073 453 aa16.99■□□□□ 0.31
PSPC1-206ENST00000619300 STMN3Q9NZ72 180 aa16.99■□□□□ 0.31
PSPC1-206ENST00000619300 LOC101059948A0A1B0GTJ6 334 aa16.99■□□□□ 0.31
PSPC1-206ENST00000619300 EIF4EP06730 217 aaKnown RBP16.99■□□□□ 0.31
PSPC1-206ENST00000619300 PGA4P0DJD7 388 aa16.99■□□□□ 0.31
PSPC1-206ENST00000619300 PGA3P0DJD8 388 aa16.99■□□□□ 0.31
PSPC1-206ENST00000619300 TALDO1P37837 337 aa16.99■□□□□ 0.31
PSPC1-206ENST00000619300 CYB561P49447 251 aa16.99■□□□□ 0.31
PSPC1-206ENST00000619300 RIDAP52758 137 aaKnown RBP16.99■□□□□ 0.31
PSPC1-206ENST00000619300 PIP4P1Q86T03 277 aa16.99■□□□□ 0.31
PSPC1-206ENST00000619300 RAB43Q86YS6 212 aa16.99■□□□□ 0.31
PSPC1-206ENST00000619300 RDH10Q8IZV5 341 aa16.99■□□□□ 0.31
PSPC1-206ENST00000619300 CADM3Q8N126 398 aa16.99■□□□□ 0.31
PSPC1-206ENST00000619300 GPR148Q8TDV2 347 aa16.99■□□□□ 0.31
PSPC1-206ENST00000619300 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.99■□□□□ 0.31
PSPC1-206ENST00000619300 TEKT2Q9UIF3 430 aa16.99■□□□□ 0.31
PSPC1-206ENST00000619300 A0A0G2JMM0 328 aa16.98■□□□□ 0.31
PSPC1-206ENST00000619300 A0A1W2PPB8 328 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms