RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 GZMMP51124 257 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 SNU13P55769 128 aaKnown RBP12.62□□□□□ -0.39
CIITA-213ENST00000618327 KCNJ8Q15842 424 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 METTL11BQ5VVY1 283 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 VASH1Q7L8A9 365 aaPredicted RBP12.62□□□□□ -0.39
CIITA-213ENST00000618327 NAXDQ8IW45 347 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 SYNPRQ8TBG9 265 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 CPT1CQ8TCG5 803 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 FOXRED1Q96CU9 486 aaPredicted RBP12.62□□□□□ -0.39
CIITA-213ENST00000618327 NRIP3Q9NQ35 241 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 B3GNT3Q9Y2A9 372 aa12.62□□□□□ -0.39
CIITA-213ENST00000618327 A0A087WZY1 265 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 CBR3O75828 277 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 AMY2AP04746 511 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 PNLIPP16233 465 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 MAP2K6P52564 334 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 LRRC28Q86X40 367 aaPredicted RBP12.61□□□□□ -0.39
CIITA-213ENST00000618327 OR14A2Q96R54 314 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 ZNF442Q9H7R0 627 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 A0A1W2PR77 199 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 RRP8O43159 456 aaKnown RBP12.61□□□□□ -0.39
CIITA-213ENST00000618327 SLC22A5O76082 557 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 HTR3BO95264 441 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 AMY2BP19961 511 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 MTNR1BP49286 362 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 C16orf47Q6ZP98 133 aaPredicted RBP12.61□□□□□ -0.39
CIITA-213ENST00000618327 COMTD1Q86VU5 262 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 MAML2Q8IZL2 1156 aaPredicted RBP12.61□□□□□ -0.39
CIITA-213ENST00000618327 OR10G3Q8NGC4 313 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 KCTD12Q96CX2 325 aaKnown RBP12.61□□□□□ -0.39
CIITA-213ENST00000618327 TSSK2Q96PF2 358 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 PHB2Q99623 299 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 TXNIPQ9H3M7 391 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.61□□□□□ -0.39
CIITA-213ENST00000618327 A6NIN4 97 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 SSX4O60224 188 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 CAMLGP49069 296 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 ARL6IP1Q15041 203 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 ZNF813Q6ZN06 617 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 GLB1L2Q8IW92 636 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 LILRB4Q8NHJ6 448 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 TMEM43Q9BTV4 400 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 GON7Q9BXV9 100 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 APMAPQ9HDC9 416 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 EXO1Q9UQ84 846 aaKnown RBP12.61□□□□□ -0.39
CIITA-213ENST00000618327 PRAMEF27A3QJZ7 478 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 HRKO00198 91 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 HRO43593 1189 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 CD34P28906 385 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 GALNSP34059 522 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 SF3A2Q15428 464 aaKnown RBP12.61□□□□□ -0.39
CIITA-213ENST00000618327 ZNF74Q16587 644 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 HES3Q5TGS1 186 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 C12orf73Q69YU5 71 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 PARP16Q8N5Y8 322 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 ZBTB8AQ96BR9 441 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 HCAR1Q9BXC0 346 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 OR51B6Q9H340 312 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 LHX9Q9NQ69 397 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 C20orf141Q9NUB4 165 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 MED29Q9NX70 200 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 SIGLEC7Q9Y286 467 aa12.61□□□□□ -0.39
CIITA-213ENST00000618327 hCG_1807616A0A1W2PRN6 198 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 PRICKLE3O43900 615 aaPredicted RBP12.6□□□□□ -0.39
CIITA-213ENST00000618327 TSPAN15O95858 294 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 IFNA1P01562 189 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 ZNF35P13682 527 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 AKR1C4P17516 323 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 HCCSP53701 268 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 FUT7Q11130 342 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 YIF1BQ5BJH7 314 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 LIPNQ5VXI9 398 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 KTI12Q96EK9 354 aaPredicted RBP12.6□□□□□ -0.39
CIITA-213ENST00000618327 MFFQ9GZY8 342 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 SH3BGRL2Q9UJC5 107 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 WASF3Q9UPY6 502 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 PCDHGA5Q9Y5G8 931 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 B3GALT1Q9Y5Z6 326 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 A0A1B0GV50 99 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 IFNA10P01566 189 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 ZMAT1Q5H9K5 638 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 OR51T1Q8NGJ9 327 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 SLC35B4Q969S0 331 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 OR51J1Q9H342 316 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 ASF1BQ9NVP2 202 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 FBXL4Q9UKA2 621 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 ABCA7Q8IZY2 2146 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 FAM230AA0A1W2PPH8 454 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 PRSS37A4D1T9 235 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 ZNF587BE7ETH6 402 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 PCSK6P29122 969 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 AVPR2P30518 371 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 DMWDQ09019 674 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 MFAP5Q13361 173 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 GPR157Q5UAW9 335 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 HEPHL1Q6MZM0 1159 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 CFAP77Q6ZQR2 320 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 ESPNLQ6ZVH7 1005 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 PDCD1LG2Q9BQ51 273 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 NOX4Q9NPH5 578 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms