RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 Q499Y3 187 aa11.14□□□□□ -0.63
CIITA-212ENST00000618207 CARD17Q5XLA6 110 aa11.14□□□□□ -0.63
CIITA-212ENST00000618207 NUP54Q7Z3B4 507 aa11.14□□□□□ -0.63
CIITA-212ENST00000618207 BMPERQ8N8U9 685 aa11.14□□□□□ -0.63
CIITA-212ENST00000618207 ZNF519Q8TB69 540 aa11.14□□□□□ -0.63
CIITA-212ENST00000618207 HGDQ93099 445 aa11.14□□□□□ -0.63
CIITA-212ENST00000618207 DACT3Q96B18 629 aaPredicted RBP11.14□□□□□ -0.63
CIITA-212ENST00000618207 ST6GAL2Q96JF0 529 aa11.14□□□□□ -0.63
CIITA-212ENST00000618207 COMMD4Q9H0A8 199 aa11.14□□□□□ -0.63
CIITA-212ENST00000618207 FBXL3Q9UKT7 428 aa11.14□□□□□ -0.63
CIITA-212ENST00000618207 V9GY05 133 aa11.14□□□□□ -0.63
CIITA-212ENST00000618207 KLK2P20151 261 aa11.14□□□□□ -0.63
CIITA-212ENST00000618207 CAPZA2P47755 286 aa11.14□□□□□ -0.63
CIITA-212ENST00000618207 CCR6P51684 374 aa11.14□□□□□ -0.63
CIITA-212ENST00000618207 RPS18P62269 152 aaKnown RBP11.14□□□□□ -0.63
CIITA-212ENST00000618207 ZXDAP98168 799 aa11.14□□□□□ -0.63
CIITA-212ENST00000618207 PLA2G7Q13093 441 aa11.14□□□□□ -0.63
CIITA-212ENST00000618207 LRFN4Q6PJG9 635 aa11.14□□□□□ -0.63
CIITA-212ENST00000618207 TOMM5Q8N4H5 51 aa11.14□□□□□ -0.63
CIITA-212ENST00000618207 TEX19Q8NA77 164 aa11.14□□□□□ -0.63
CIITA-212ENST00000618207 TRIM63Q969Q1 353 aa11.14□□□□□ -0.63
CIITA-212ENST00000618207 OR5B2Q96R09 309 aa11.14□□□□□ -0.63
CIITA-212ENST00000618207 KCNJ15Q99712 375 aa11.14□□□□□ -0.63
CIITA-212ENST00000618207 NKIRAS2Q9NYR9 191 aa11.14□□□□□ -0.63
CIITA-212ENST00000618207 FKBP7Q9Y680 259 aa11.14□□□□□ -0.63
CIITA-212ENST00000618207 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 A0A1W2PPC1 479 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 C19orf67A6NJJ6 358 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 ANXA2P2A6NMY6 339 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 OR4C45A6NMZ5 311 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 FTCDNL1E5RQL4 147 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 SEC14L5O43304 696 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 TRIM3O75382 744 aaPredicted RBP11.13□□□□□ -0.63
CIITA-212ENST00000618207 MT-ND4P03905 459 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 ANXA2P07355 339 aaKnown RBP11.13□□□□□ -0.63
CIITA-212ENST00000618207 TMIGD3P0DMS9 266 aaPredicted RBP11.13□□□□□ -0.63
CIITA-212ENST00000618207 KIR3DL2P43630 455 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 BIDP55957 195 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 MFGE8Q08431 387 aaPredicted RBP11.13□□□□□ -0.63
CIITA-212ENST00000618207 CAMK2DQ13557 499 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 ZFP69Q49AA0 526 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 PYHIN1Q6K0P9 492 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 UNQ9370/PRO34162Q6UXP9 181 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 OIT3Q8WWZ8 545 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 UBL7Q96S82 380 aaPredicted RBP11.13□□□□□ -0.63
CIITA-212ENST00000618207 ABHD6Q9BV23 337 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 NUDT15Q9NV35 164 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 MYEF2Q9P2K5 600 aaKnown RBP11.13□□□□□ -0.63
CIITA-212ENST00000618207 SPATA2Q9UM82 520 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 EP300Q09472 2414 aaPredicted RBP11.13□□□□□ -0.63
CIITA-212ENST00000618207 CCDC163A0A0D9SF12 145 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 PMS2P1A4D2B8 440 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 INMT-MINDY4F8WBC2 141 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 SMLR1H3BR10 107 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 HLA-DQB1P01920 261 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 GLO1Q04760 184 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 MYBPHQ13203 477 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 NTRK2Q16620 822 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 C4orf46Q504U0 113 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 BCL2L15Q5TBC7 163 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 H1FNTQ75WM6 255 aaPredicted RBP11.13□□□□□ -0.63
CIITA-212ENST00000618207 SIAH3Q8IW03 269 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 AGBL5Q8NDL9 886 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 ANGPTL6Q8NI99 470 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 SLC39A7Q92504 469 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 SLC7A6Q92536 515 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 SPEF1Q9Y4P9 236 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 WIF1Q9Y5W5 379 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 TMEM14AQ9Y6G1 99 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 IGLV1-36A0A0B4J1U3 117 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 TDGF1P13385 188 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 GIFP27352 417 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 SLC18B1Q6NT16 456 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 MRPL14Q6P1L8 145 aaKnown RBP11.13□□□□□ -0.63
CIITA-212ENST00000618207 DCXRQ7Z4W1 244 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 KCTD20Q7Z5Y7 419 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 SYNPRQ8TBG9 265 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 STK35Q8TDR2 534 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 SLITRK2Q9H156 845 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 ABRACLQ9P1F3 81 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 C19orf25Q9UFG5 118 aaPredicted RBP11.13□□□□□ -0.63
CIITA-212ENST00000618207 CACNG2Q9Y698 323 aa11.13□□□□□ -0.63
CIITA-212ENST00000618207 TNRC6BQ9UPQ9 1833 aaKnown RBP11.12□□□□□ -0.63
CIITA-212ENST00000618207 RAMP1O60894 148 aa11.12□□□□□ -0.63
CIITA-212ENST00000618207 F10P00742 488 aa11.12□□□□□ -0.63
CIITA-212ENST00000618207 ZNF823P16415 610 aa11.12□□□□□ -0.63
CIITA-212ENST00000618207 HSF1Q00613 529 aa11.12□□□□□ -0.63
CIITA-212ENST00000618207 TOMM20Q15388 145 aa11.12□□□□□ -0.63
CIITA-212ENST00000618207 FAAP20Q6NZ36 180 aa11.12□□□□□ -0.63
CIITA-212ENST00000618207 MISPQ8IVT2 679 aa11.12□□□□□ -0.63
CIITA-212ENST00000618207 BEST4Q8NFU0 473 aa11.12□□□□□ -0.63
CIITA-212ENST00000618207 OR4K17Q8NGC6 315 aa11.12□□□□□ -0.63
CIITA-212ENST00000618207 ST8SIA1Q92185 356 aa11.12□□□□□ -0.63
CIITA-212ENST00000618207 YIPF5Q969M3 257 aa11.12□□□□□ -0.63
CIITA-212ENST00000618207 DDIT4LQ96D03 193 aa11.12□□□□□ -0.63
CIITA-212ENST00000618207 SPACA9Q96E40 222 aaPredicted RBP11.12□□□□□ -0.63
CIITA-212ENST00000618207 GNRHR2Q96P88 292 aa11.12□□□□□ -0.63
CIITA-212ENST00000618207 OR8B4Q96RC9 309 aa11.12□□□□□ -0.63
CIITA-212ENST00000618207 TP63Q9H3D4 680 aaPredicted RBP11.12□□□□□ -0.63
CIITA-212ENST00000618207 SEC61A2Q9H9S3 476 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms