RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 ACER2Q5QJU3 275 aa15.5■□□□□ 0.07
PCDHGC3-205ENST00000617641 TRMT10AQ8TBZ6 339 aaKnown RBP15.5■□□□□ 0.07
PCDHGC3-205ENST00000617641 HAVCR2Q8TDQ0 301 aa15.5■□□□□ 0.07
PCDHGC3-205ENST00000617641 SGCZQ96LD1 299 aa15.5■□□□□ 0.07
PCDHGC3-205ENST00000617641 ABHD6Q9BV23 337 aa15.5■□□□□ 0.07
PCDHGC3-205ENST00000617641 H3BSH0 61 aa15.49■□□□□ 0.07
PCDHGC3-205ENST00000617641 TRAF3IP2O43734 574 aaPredicted RBP15.49■□□□□ 0.07
PCDHGC3-205ENST00000617641 EPXP11678 715 aa15.49■□□□□ 0.07
PCDHGC3-205ENST00000617641 SRMP19623 302 aa15.49■□□□□ 0.07
PCDHGC3-205ENST00000617641 KIR3DL2P43630 455 aa15.49■□□□□ 0.07
PCDHGC3-205ENST00000617641 SOX2P48431 317 aa15.49■□□□□ 0.07
PCDHGC3-205ENST00000617641 EIF3IQ13347 325 aaKnown RBP15.49■□□□□ 0.07
PCDHGC3-205ENST00000617641 AGAP7PQ5VUJ5 663 aa15.49■□□□□ 0.07
PCDHGC3-205ENST00000617641 TMEM225Q6GV28 225 aa15.49■□□□□ 0.07
PCDHGC3-205ENST00000617641 H3F3CQ6NXT2 135 aa15.49■□□□□ 0.07
PCDHGC3-205ENST00000617641 METAP1DQ6UB28 335 aaPredicted RBP15.49■□□□□ 0.07
PCDHGC3-205ENST00000617641 ZNF679Q8IYX0 411 aa15.49■□□□□ 0.07
PCDHGC3-205ENST00000617641 RDH10Q8IZV5 341 aa15.49■□□□□ 0.07
PCDHGC3-205ENST00000617641 CADM3Q8N126 398 aa15.49■□□□□ 0.07
PCDHGC3-205ENST00000617641 DTX3Q8N9I9 347 aa15.49■□□□□ 0.07
PCDHGC3-205ENST00000617641 OR10AC1Q8NH08 325 aa15.49■□□□□ 0.07
PCDHGC3-205ENST00000617641 PHYHIPQ92561 330 aa15.49■□□□□ 0.07
PCDHGC3-205ENST00000617641 MIB2Q96AX9 1013 aa15.49■□□□□ 0.07
PCDHGC3-205ENST00000617641 EXTL2Q9UBQ6 330 aa15.49■□□□□ 0.07
PCDHGC3-205ENST00000617641 OR2M5A3KFT3 312 aa15.49■□□□□ 0.07
PCDHGC3-205ENST00000617641 CENPBD1B2RD01 187 aa15.49■□□□□ 0.07
PCDHGC3-205ENST00000617641 KHDRBS3O75525 346 aaKnown RBP15.49■□□□□ 0.07
PCDHGC3-205ENST00000617641 HNRNPCP07910 306 aaKnown RBP eCLIP15.49■□□□□ 0.07
PCDHGC3-205ENST00000617641 CAMK2DQ13557 499 aa15.49■□□□□ 0.07
PCDHGC3-205ENST00000617641 WDR38Q5JTN6 314 aa15.49■□□□□ 0.07
PCDHGC3-205ENST00000617641 CCBE1Q6UXH8 406 aaPredicted RBP15.49■□□□□ 0.07
PCDHGC3-205ENST00000617641 TMPPEQ6ZT21 453 aa15.49■□□□□ 0.07
PCDHGC3-205ENST00000617641 KRT77Q7Z794 578 aa15.49■□□□□ 0.07
PCDHGC3-205ENST00000617641 ZNF676Q8N7Q3 588 aa15.49■□□□□ 0.07
PCDHGC3-205ENST00000617641 TMEM41AQ96HV5 264 aa15.49■□□□□ 0.07
PCDHGC3-205ENST00000617641 C4orf45Q96LM5 186 aa15.49■□□□□ 0.07
PCDHGC3-205ENST00000617641 KLHL13Q9P2N7 655 aa15.49■□□□□ 0.07
PCDHGC3-205ENST00000617641 PCDHGA1Q9Y5H4 931 aa15.49■□□□□ 0.07
PCDHGC3-205ENST00000617641 TRABD2BA6NFA1 517 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 APOA1P02647 267 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 P04436 131 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 SNRPBP14678 240 aaKnown RBP15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 ZNF823P16415 610 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 FKBP2P26885 142 aaKnown RBP15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 ROM1Q03395 351 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 SCN1BQ07699 218 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 Q499Y3 187 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 OR7E24Q6IFN5 339 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 LRRC28Q86X40 367 aaPredicted RBP15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 LINC00346Q8IVM7 164 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 BEST3Q8N1M1 668 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 OR5H6Q8NGV6 325 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 SETD6Q8TBK2 473 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 DCBLD2Q96PD2 775 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 GFI1Q99684 422 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 NEURL2Q9BR09 285 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 MRPL13Q9BYD1 178 aaKnown RBP15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 COMMD4Q9H0A8 199 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 CYSLTR2Q9NS75 346 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 CACNA1HO95180 2353 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 LOC101059948A0A1B0GTJ6 334 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 A0A1B0GVC2 190 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 A6NIN4 97 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 AQP7P3A6NL99 342 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 HSPB2A8KAH6 182 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 TERTO14746 1132 aaKnown RBP15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 TNFSF15O95150 251 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 F10P00742 488 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 SLC35A1P78382 337 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 TOMM20Q15388 145 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 HSPB2Q16082 182 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 CARD17Q5XLA6 110 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 KCTD18Q6PI47 426 aaPredicted RBP15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 Q8N402 240 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 ZNF454Q8N9F8 522 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 OR4M1Q8NGD0 313 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 OR51A4Q8NGJ6 313 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 OR52N5Q8NH56 324 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 RNF128Q8TEB7 428 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 C17orf50Q8WW18 174 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 PSMF1Q92530 271 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 PPP1R14BQ96C90 147 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 THOC3Q96J01 351 aaKnown RBP15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 OXGR1Q96P68 337 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 MFRPQ9BY79 579 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 ZCCHC4Q9H5U6 513 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 SACM1LQ9NTJ5 587 aa15.48■□□□□ 0.07
PCDHGC3-205ENST00000617641 AHCTF1Q8WYP5 2266 aa15.47■□□□□ 0.07
PCDHGC3-205ENST00000617641 TRBV5-5A0A0J9YX44 114 aa15.47■□□□□ 0.07
PCDHGC3-205ENST00000617641 ANKRD61A6NGH8 418 aa15.47■□□□□ 0.07
PCDHGC3-205ENST00000617641 TMEM212A6NML5 194 aa15.47■□□□□ 0.07
PCDHGC3-205ENST00000617641 ATP6V1G1O75348 118 aa15.47■□□□□ 0.07
PCDHGC3-205ENST00000617641 CBR3O75828 277 aa15.47■□□□□ 0.07
PCDHGC3-205ENST00000617641 PNPP00491 289 aa15.47■□□□□ 0.07
PCDHGC3-205ENST00000617641 CLRN1P58418 232 aa15.47■□□□□ 0.07
PCDHGC3-205ENST00000617641 RASGEF1BQ0VAM2 473 aa15.47■□□□□ 0.07
PCDHGC3-205ENST00000617641 TRIP6Q15654 476 aaKnown RBP15.47■□□□□ 0.07
PCDHGC3-205ENST00000617641 DCXRQ7Z4W1 244 aa15.47■□□□□ 0.07
PCDHGC3-205ENST00000617641 NRARPQ7Z6K4 114 aa15.47■□□□□ 0.07
PCDHGC3-205ENST00000617641 ZNF227Q86WZ6 799 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms