RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 CBLN3Q6UW01 205 aa8.11□□□□□ -1.11
PDLIM5-222ENST00000615540 OVCH1Q7RTY7 1134 aa8.11□□□□□ -1.11
PDLIM5-222ENST00000615540 MFSD4AQ8N468 514 aa8.11□□□□□ -1.11
PDLIM5-222ENST00000615540 BPIFB2Q8N4F0 458 aa8.11□□□□□ -1.11
PDLIM5-222ENST00000615540 ACKR4Q9NPB9 350 aa8.11□□□□□ -1.11
PDLIM5-222ENST00000615540 TMEM74BQ9NUR3 256 aa8.11□□□□□ -1.11
PDLIM5-222ENST00000615540 UBL3O95164 117 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 IGKV1D-16P01601 117 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 HLA-AP01891 365 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 ENPP1P22413 925 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 AKR1D1P51857 326 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 ARHGDIBP52566 201 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 FMODQ06828 376 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 TMEM71Q6P5X7 295 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 MRPL21Q7Z2W9 205 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 C17orf47Q8NEP4 570 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 TAS2R3Q9NYW6 316 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 CES1P1Q9UKY3 287 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 EXOGQ9Y2C4 368 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 SPEF1Q9Y4P9 236 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 LOC100289279A0A1B0GTE1 492 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 LOC107986453A0A1B0GWG9 222 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 LMO7DNF2Z398 122 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 NKX2-2O95096 273 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 QDPRP09417 244 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 APOBEC1P41238 236 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 RAD52P43351 418 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 HMGA2P52926 109 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 MVDP53602 400 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 RRAS2P62070 204 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 NPSR1Q6W5P4 371 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 SLC16A14Q7RTX9 510 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 CNEP1R1Q8N9A8 125 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 ZNF845Q96IR2 970 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 TXNDC15Q96J42 360 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 KCND3Q9UK17 655 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 NOSIPQ9Y314 301 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 VWA8A3KMH1 1905 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 A0A087WUJ7 227 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 hCG_1807616A0A1W2PRN6 198 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 PRAMEF27A3QJZ7 478 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 OR6C68A6NDL8 312 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 NAP1L6A6NFF2 107 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 A6NLC8 198 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 CYR61O00622 381 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 GPRIN2O60269 458 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 MT-ATP6P00846 226 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 TBXA2RP21731 343 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 PTGS2P35354 604 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 CXADRP78310 365 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 CD226Q15762 336 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 ANKRD37Q7Z713 158 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 SRRQ9GZT4 340 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 ENKD1Q9H0I2 346 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 SLC22A11Q9NSA0 550 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 ASF1BQ9NVP2 202 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 IL20Q9NYY1 176 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 LILRA5A6NI73 299 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 PCP4L1A6NKN8 68 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 RAB40ALP0C0E4 278 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 CDK5R1Q15078 307 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 RAB40AQ8WXH6 277 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 SMIM19Q96E16 107 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 MOGAT1Q96PD6 335 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 PIGQQ9BRB3 760 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 SMIM3Q9BZL3 60 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 ERVMER34-1Q9H9K5 563 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 SH3BGRL2Q9UJC5 107 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 IGHV1OR21-1A0A087WYE8 117 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 C4orf47A7E2U8 309 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 MPZL1O95297 269 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 GNB3P16520 340 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 IL32P24001 234 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 TAS2R19P59542 299 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 UBE2NP61088 152 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 C6orf15Q6UXA7 325 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 STAC2Q6ZMT1 411 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 MEX3BQ6ZN04 569 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 CCDC190Q86UF4 302 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 COMTD1Q86VU5 262 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 RFLNBQ8N5W9 214 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 OR1N1Q8NGS0 311 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 OR4K15Q8NH41 348 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 SLAMF6Q96DU3 332 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 SEC22AQ96IW7 307 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 PAPOLGQ9BWT3 736 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 EHFQ9NZC4 300 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 PLXNA3P51805 1871 aa8.1□□□□□ -1.11
PDLIM5-222ENST00000615540 CENPBD1B2RD01 187 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 CCSO14618 274 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 RAB2AP61019 212 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 GUCA2AQ02747 115 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 C3orf33Q6P1S2 294 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 KANSL1Q7Z3B3 1105 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 FJX1Q86VR8 437 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 MFSD8Q8NHS3 518 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 C3orf49Q96BT1 292 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 SELENOIQ9C0D9 397 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 NIPAL2Q9H841 368 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 TET1Q8NFU7 2136 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms