RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 B4GALNT1Q00973 533 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 FOXF1Q12946 379 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 BCL2A1Q16548 175 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 NTRK2Q16620 822 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 TAMM41Q96BW9 452 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 CCDC120Q96HB5 630 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 NDUFB7P17568 137 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 HOXA1P49639 335 aaPredicted RBP8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 CDC20Q12834 499 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 CAMK2BQ13554 666 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 RHEBQ15382 184 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 NADK2Q4G0N4 442 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 B3GNTL1Q67FW5 361 aaPredicted RBP8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 ASCL5Q7RTU5 278 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 GPR155Q7Z3F1 870 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 CLDN23Q96B33 292 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 HRASLS5Q96KN8 279 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 CRLF2Q9HC73 371 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 NECAP2Q9NVZ3 263 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 OCIAD1Q9NX40 245 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 FOXD3Q9UJU5 478 aaPredicted RBP8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 FXYD6-FXYD2A0A087WZ82 144 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 NRASP01111 189 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 FGF5P12034 268 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 EPHA1P21709 976 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 GABRA5P31644 462 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 NR4A2P43354 598 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 SEC61A1P61619 476 aaKnown RBP8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 ZIC1Q15915 447 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 HFEQ30201 348 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 PNPLA1Q8N8W4 532 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 OR4F15Q8NGB8 312 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 OR51L1Q8NGJ5 315 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 OR6F1Q8NGZ6 308 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 RAB1CQ92928 201 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 RNF170Q96K19 258 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 FXYD6Q9H0Q3 95 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 NUBP2Q9Y5Y2 271 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 CITO14578 2027 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 SLC35F4A4IF30 521 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 IFNL4K9M1U5 179 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 UPK1AO00322 258 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 DHHO43323 396 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 PPP3CBP16298 524 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 GLRA1P23415 457 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 TACR1P25103 407 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 MFGE8Q08431 387 aaPredicted RBP8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 TBCEQ15813 527 aaPredicted RBP8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 SLC36A1Q7Z2H8 476 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 DMBX1Q8NFW5 382 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 OR6M1Q8NGM8 313 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 ANKRD9Q96BM1 317 aaPredicted RBP8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 GLTPQ9NZD2 209 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 MYO5AQ9Y4I1 1855 aaKnown RBP8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 RP2O75695 350 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 RAB3DO95716 219 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 IGHV4-34P06331 123 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 CHRM2P08172 466 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 CT45A6P0DMU7 189 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 CT45A5P0DMU8 189 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 CT45A7P0DMV0 189 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 CT45A8P0DMV1 189 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 CT45A9P0DMV2 189 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 NFYAP23511 347 aaPredicted RBP8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 LTBQ06643 244 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 SNTB2Q13425 540 aaKnown RBP8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 SLC22A6Q4U2R8 563 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 CT45A2Q5DJT8 189 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 CT45A1Q5HYN5 189 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 FOXRED2Q8IWF2 684 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 TMEM185AQ8NFB2 350 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 OR5M1Q8NGP8 315 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 CT45A3Q8NHU0 189 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 SLC26A1Q9H2B4 701 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 COA3Q9Y2R0 106 aaPredicted RBP8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 FBXO7Q9Y3I1 522 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 KIF13BQ9NQT8 1826 aa8.85□□□□□ -0.99
TNFRSF9-204ENST00000615230 GASTP01350 101 aa8.85□□□□□ -0.99
TNFRSF9-204ENST00000615230 RAF1P04049 648 aa8.85□□□□□ -0.99
TNFRSF9-204ENST00000615230 S100A9P06702 114 aaKnown RBP8.85□□□□□ -0.99
TNFRSF9-204ENST00000615230 ACP1P24666 158 aa8.85□□□□□ -0.99
TNFRSF9-204ENST00000615230 ABCD3P28288 659 aa8.85□□□□□ -0.99
TNFRSF9-204ENST00000615230 C21orf33P30042 268 aaPredicted RBP8.85□□□□□ -0.99
TNFRSF9-204ENST00000615230 HOXA6P31267 233 aa8.85□□□□□ -0.99
TNFRSF9-204ENST00000615230 IDH3GP51553 393 aaPredicted RBP8.85□□□□□ -0.99
TNFRSF9-204ENST00000615230 FUT7Q11130 342 aa8.85□□□□□ -0.99
TNFRSF9-204ENST00000615230 HES1Q14469 280 aa8.85□□□□□ -0.99
TNFRSF9-204ENST00000615230 PCGF3Q3KNV8 242 aa8.85□□□□□ -0.99
TNFRSF9-204ENST00000615230 OGFOD3Q6PK18 319 aa8.85□□□□□ -0.99
TNFRSF9-204ENST00000615230 FAM185AQ8N0U4 392 aa8.85□□□□□ -0.99
TNFRSF9-204ENST00000615230 KIRREL1Q96J84 757 aa8.85□□□□□ -0.99
TNFRSF9-204ENST00000615230 PBDC1Q9BVG4 233 aa8.85□□□□□ -0.99
TNFRSF9-204ENST00000615230 PRDM7Q9NQW5 492 aa8.85□□□□□ -0.99
TNFRSF9-204ENST00000615230 ZNF355PQ9NSJ1 428 aa8.85□□□□□ -0.99
TNFRSF9-204ENST00000615230 PLA2G3Q9NZ20 509 aa8.85□□□□□ -0.99
TNFRSF9-204ENST00000615230 C5orf49A4QMS7 147 aa8.85□□□□□ -0.99
TNFRSF9-204ENST00000615230 INMT-MINDY4F8WBC2 141 aa8.85□□□□□ -0.99
TNFRSF9-204ENST00000615230 SOD1P00441 154 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms