RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 C9orf16Q9BUW7 83 aa11.59□□□□□ -0.55
MDC1-209ENST00000613547 C1QTNF6Q9BXI9 259 aa11.59□□□□□ -0.55
MDC1-209ENST00000613547 NUAK2Q9H093 628 aa11.59□□□□□ -0.55
MDC1-209ENST00000613547 RNF121Q9H920 327 aa11.59□□□□□ -0.55
MDC1-209ENST00000613547 CCNB1IP1Q9NPC3 277 aa11.59□□□□□ -0.55
MDC1-209ENST00000613547 RPRD1BQ9NQG5 326 aaKnown RBP11.59□□□□□ -0.55
MDC1-209ENST00000613547 CMC2Q9NRP2 79 aa11.59□□□□□ -0.55
MDC1-209ENST00000613547 FBXL3Q9UKT7 428 aa11.59□□□□□ -0.55
MDC1-209ENST00000613547 UGT2A1Q9Y4X1 527 aa11.59□□□□□ -0.55
MDC1-209ENST00000613547 ADGRG4Q8IZF6 3080 aa11.58□□□□□ -0.55
MDC1-209ENST00000613547 PKDREJQ9NTG1 2253 aa11.58□□□□□ -0.55
MDC1-209ENST00000613547 FREM1Q5H8C1 2179 aa11.58□□□□□ -0.56
MDC1-209ENST00000613547 IGKV1D-43A0A0B4J1Z2 117 aa11.58□□□□□ -0.56
MDC1-209ENST00000613547 FAM221AA4D161 298 aa11.58□□□□□ -0.56
MDC1-209ENST00000613547 HLA-HP01893 362 aa11.58□□□□□ -0.56
MDC1-209ENST00000613547 CBR1P16152 277 aa11.58□□□□□ -0.56
MDC1-209ENST00000613547 CTLA4P16410 223 aa11.58□□□□□ -0.56
MDC1-209ENST00000613547 MSR1P21757 451 aa11.58□□□□□ -0.56
MDC1-209ENST00000613547 LAP3P28838 519 aa11.58□□□□□ -0.56
MDC1-209ENST00000613547 CDAP32320 146 aa11.58□□□□□ -0.56
MDC1-209ENST00000613547 CRISP1P54107 249 aa11.58□□□□□ -0.56
MDC1-209ENST00000613547 PCBD1P61457 104 aa11.58□□□□□ -0.56
MDC1-209ENST00000613547 TUBA1BP68363 451 aa11.58□□□□□ -0.56
MDC1-209ENST00000613547 TUBA4AP68366 448 aa11.58□□□□□ -0.56
MDC1-209ENST00000613547 GLO1Q04760 184 aa11.58□□□□□ -0.56
MDC1-209ENST00000613547 BSPH1Q075Z2 132 aa11.58□□□□□ -0.56
MDC1-209ENST00000613547 RCN1Q15293 331 aa11.58□□□□□ -0.56
MDC1-209ENST00000613547 NCMAPQ5T1S8 102 aa11.58□□□□□ -0.56
MDC1-209ENST00000613547 FAM27BQ5VT28 67 aa11.58□□□□□ -0.56
MDC1-209ENST00000613547 TMEM53Q6P2H8 277 aa11.58□□□□□ -0.56
MDC1-209ENST00000613547 TUBA1AQ71U36 451 aa11.58□□□□□ -0.56
MDC1-209ENST00000613547 SKA3Q8IX90 412 aa11.58□□□□□ -0.56
MDC1-209ENST00000613547 DEPDC4Q8N2C3 294 aa11.58□□□□□ -0.56
MDC1-209ENST00000613547 IQCF1Q8N6M8 205 aa11.58□□□□□ -0.56
MDC1-209ENST00000613547 NPEPL1Q8NDH3 523 aa11.58□□□□□ -0.56
MDC1-209ENST00000613547 OR2T4Q8NH00 348 aa11.58□□□□□ -0.56
MDC1-209ENST00000613547 EME1Q96AY2 570 aa11.58□□□□□ -0.56
MDC1-209ENST00000613547 RADILQ96JH8 1075 aa11.58□□□□□ -0.56
MDC1-209ENST00000613547 SLC38A2Q96QD8 506 aa11.58□□□□□ -0.56
MDC1-209ENST00000613547 SH3GL3Q99963 347 aa11.58□□□□□ -0.56
MDC1-209ENST00000613547 RACGAP1Q9H0H5 632 aa11.58□□□□□ -0.56
MDC1-209ENST00000613547 SLC25A19Q9HC21 320 aa11.58□□□□□ -0.56
MDC1-209ENST00000613547 SRA1Q9HD15 236 aaKnown RBP11.58□□□□□ -0.56
MDC1-209ENST00000613547 NPAP1Q9NZP6 1156 aa11.58□□□□□ -0.56
MDC1-209ENST00000613547 RNF115Q9Y4L5 304 aa11.58□□□□□ -0.56
MDC1-209ENST00000613547 FKBP7Q9Y680 259 aa11.58□□□□□ -0.56
MDC1-209ENST00000613547 C12orf71A8MTZ7 269 aa11.57□□□□□ -0.56
MDC1-209ENST00000613547 H0YHG0 523 aa11.57□□□□□ -0.56
MDC1-209ENST00000613547 CRYAAP02489 173 aa11.57□□□□□ -0.56
MDC1-209ENST00000613547 RAD23AP54725 363 aa11.57□□□□□ -0.56
MDC1-209ENST00000613547 RAB1AP62820 205 aa11.57□□□□□ -0.56
MDC1-209ENST00000613547 PPP2R2BQ00005 443 aa11.57□□□□□ -0.56
MDC1-209ENST00000613547 CDK5Q00535 292 aa11.57□□□□□ -0.56
MDC1-209ENST00000613547 PLP2Q04941 152 aa11.57□□□□□ -0.56
MDC1-209ENST00000613547 NPRL3Q12980 569 aa11.57□□□□□ -0.56
MDC1-209ENST00000613547 DAG1Q14118 895 aa11.57□□□□□ -0.56
MDC1-209ENST00000613547 CRMP1Q14194 572 aa11.57□□□□□ -0.56
MDC1-209ENST00000613547 C3orf36Q3SXR2 165 aa11.57□□□□□ -0.56
MDC1-209ENST00000613547 SEZ6L2Q6UXD5 910 aa11.57□□□□□ -0.56
MDC1-209ENST00000613547 FOXL2NBQ6ZUU3 175 aa11.57□□□□□ -0.56
MDC1-209ENST00000613547 ZNF771Q7L3S4 317 aaPredicted RBP11.57□□□□□ -0.56
MDC1-209ENST00000613547 MDP1Q86V88 176 aa11.57□□□□□ -0.56
MDC1-209ENST00000613547 LRRC18Q8N456 261 aa11.57□□□□□ -0.56
MDC1-209ENST00000613547 CYB561A3Q8NBI2 242 aa11.57□□□□□ -0.56
MDC1-209ENST00000613547 SLC37A3Q8NCC5 494 aa11.57□□□□□ -0.56
MDC1-209ENST00000613547 PROKR2Q8NFJ6 384 aa11.57□□□□□ -0.56
MDC1-209ENST00000613547 WACQ9BTA9 647 aa11.57□□□□□ -0.56
MDC1-209ENST00000613547 C1orf198Q9H425 327 aa11.57□□□□□ -0.56
MDC1-209ENST00000613547 B3GNT2Q9NY97 397 aa11.57□□□□□ -0.56
MDC1-209ENST00000613547 CRNNQ9UBG3 495 aaPredicted RBP11.57□□□□□ -0.56
MDC1-209ENST00000613547 EDARQ9UNE0 448 aa11.57□□□□□ -0.56
MDC1-209ENST00000613547 COA3Q9Y2R0 106 aaPredicted RBP11.57□□□□□ -0.56
MDC1-209ENST00000613547 IGLV1-36A0A0B4J1U3 117 aa11.56□□□□□ -0.56
MDC1-209ENST00000613547 OR6C68A6NDL8 312 aa11.56□□□□□ -0.56
MDC1-209ENST00000613547 ABCD4O14678 606 aa11.56□□□□□ -0.56
MDC1-209ENST00000613547 EI24O14681 340 aa11.56□□□□□ -0.56
MDC1-209ENST00000613547 SIAH2O43255 324 aa11.56□□□□□ -0.56
MDC1-209ENST00000613547 MITFO75030 526 aaPredicted RBP11.56□□□□□ -0.56
MDC1-209ENST00000613547 PTHP01270 115 aa11.56□□□□□ -0.56
MDC1-209ENST00000613547 IGKV3-15P01624 115 aa11.56□□□□□ -0.56
MDC1-209ENST00000613547 HLA-DQA2P01906 255 aa11.56□□□□□ -0.56
MDC1-209ENST00000613547 ALPLP05186 524 aa11.56□□□□□ -0.56
MDC1-209ENST00000613547 CST2P09228 141 aa11.56□□□□□ -0.56
MDC1-209ENST00000613547 PRF1P14222 555 aa11.56□□□□□ -0.56
MDC1-209ENST00000613547 ANPEPP15144 967 aa11.56□□□□□ -0.56
MDC1-209ENST00000613547 CD40P25942 277 aa11.56□□□□□ -0.56
MDC1-209ENST00000613547 PTDSS1P48651 473 aaKnown RBP11.56□□□□□ -0.56
MDC1-209ENST00000613547 IDH3GP51553 393 aaPredicted RBP11.56□□□□□ -0.56
MDC1-209ENST00000613547 ALDH3A2P51648 485 aa11.56□□□□□ -0.56
MDC1-209ENST00000613547 ELF3P78545 371 aaPredicted RBP11.56□□□□□ -0.56
MDC1-209ENST00000613547 HSF2Q03933 536 aa11.56□□□□□ -0.56
MDC1-209ENST00000613547 PIGFQ07326 219 aa11.56□□□□□ -0.56
MDC1-209ENST00000613547 PTGES3Q15185 160 aaKnown RBP11.56□□□□□ -0.56
MDC1-209ENST00000613547 ETFDHQ16134 617 aa11.56□□□□□ -0.56
MDC1-209ENST00000613547 SLC22A25Q6T423 547 aa11.56□□□□□ -0.56
MDC1-209ENST00000613547 ZNF704Q6ZNC4 412 aaPredicted RBP11.56□□□□□ -0.56
MDC1-209ENST00000613547 ZBTB49Q6ZSB9 765 aa11.56□□□□□ -0.56
MDC1-209ENST00000613547 ZBTB46Q86UZ6 589 aa11.56□□□□□ -0.56
MDC1-209ENST00000613547 CDC20BQ86Y33 519 aa11.56□□□□□ -0.56
MDC1-209ENST00000613547 OR6V1Q8N148 313 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms