RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 HOXC5Q00444 222 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 CNN3Q15417 329 aaKnown RBP7.97□□□□□ -1.13
PDE6A-204ENST00000613228 TP53I3Q53FA7 332 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 TEX30Q5JUR7 227 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 KCTD9Q7L273 389 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 SUMF2Q8NBJ7 301 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 CNRIP1Q96F85 164 aaPredicted RBP7.97□□□□□ -1.13
PDE6A-204ENST00000613228 SARGQ9BW04 601 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 OR10A2Q9H208 303 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 CHRDQ9H2X0 955 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 UBQLN3Q9H347 655 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 NOX3Q9HBY0 568 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 FGF20Q9NP95 211 aaPredicted RBP7.97□□□□□ -1.13
PDE6A-204ENST00000613228 KCNG2Q9UJ96 466 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 RBM7Q9Y580 266 aaKnown RBP7.97□□□□□ -1.13
PDE6A-204ENST00000613228 ETV7Q9Y603 341 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 SYT7O43581 403 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 PTNP21246 168 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 SEC61A1P61619 476 aaKnown RBP7.97□□□□□ -1.13
PDE6A-204ENST00000613228 RAB1AP62820 205 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 MZT1Q08AG7 82 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 CARD17Q5XLA6 110 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 HBMQ6B0K9 141 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 ZNF546Q86UE3 836 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 C15orf54Q8N8G6 183 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 UCN3Q969E3 161 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 TNFRSF13CQ96RJ3 184 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 SLIRPQ9GZT3 109 aaKnown RBP7.97□□□□□ -1.13
PDE6A-204ENST00000613228 PARPBPQ9NWS1 579 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 CTSFQ9UBX1 484 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 WASF3Q9UPY6 502 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 ARHGAP33O14559 1287 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 LIPAP38571 399 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 RANP62826 216 aaKnown RBP7.97□□□□□ -1.13
PDE6A-204ENST00000613228 SMAD2Q15796 467 aaKnown RBP7.97□□□□□ -1.13
PDE6A-204ENST00000613228 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.97□□□□□ -1.13
PDE6A-204ENST00000613228 SCGB2B2Q4G0G5 96 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 OR2B11Q5JQS5 317 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 C12orf73Q69YU5 71 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 LIX1LQ8IVB5 337 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 FAM160A2Q8N612 972 aaPredicted RBP7.97□□□□□ -1.13
PDE6A-204ENST00000613228 DNAAF1Q8NEP3 725 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 MAFAQ8NHW3 353 aaPredicted RBP7.97□□□□□ -1.13
PDE6A-204ENST00000613228 EXOSC3Q9NQT5 275 aaKnown RBP7.97□□□□□ -1.13
PDE6A-204ENST00000613228 ALKBH4Q9NXW9 302 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 ZNF230Q9UIE0 474 aaPredicted RBP7.97□□□□□ -1.13
PDE6A-204ENST00000613228 HHLA2Q9UM44 414 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 SHROOM3Q8TF72 1996 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 M0R143 59 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 MAGEB4O15481 346 aaPredicted RBP7.97□□□□□ -1.13
PDE6A-204ENST00000613228 NQO2P16083 231 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 CPEP16870 476 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 TBXA2RP21731 343 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 TAS2R60P59551 318 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 ZNF616Q08AN1 781 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 FABP9Q0Z7S8 132 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 IL11RAQ14626 422 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 C1orf140Q5VVS0 124 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 LYPD4Q6UWN0 246 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 PLPP5Q8NEB5 264 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 NKD1Q969G9 470 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 MEGF10Q96KG7 1140 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 NRIP3Q9NQ35 241 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 OR2S2Q9NQN1 319 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 GPATCH2Q9NW75 528 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 DMRT1Q9Y5R6 373 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 SLC35F4A4IF30 521 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 FAM227AF5H4B4 570 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 TMEM11P17152 192 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 IDH3GP51553 393 aaPredicted RBP7.97□□□□□ -1.13
PDE6A-204ENST00000613228 PCBP3P57721 371 aaKnown RBP7.97□□□□□ -1.13
PDE6A-204ENST00000613228 TLE4Q04727 773 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 CAMK2DQ13557 499 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 TMEM88Q6PEY1 159 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 TMEM205Q6UW68 189 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 CPEB2Q7Z5Q1 589 aaKnown RBP7.97□□□□□ -1.13
PDE6A-204ENST00000613228 NAXDQ8IW45 347 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 KDF1Q8NAX2 398 aaPredicted RBP7.97□□□□□ -1.13
PDE6A-204ENST00000613228 SCARF2Q96GP6 870 aaPredicted RBP7.97□□□□□ -1.13
PDE6A-204ENST00000613228 UTP23Q9BRU9 249 aaKnown RBP7.97□□□□□ -1.13
PDE6A-204ENST00000613228 TMEM43Q9BTV4 400 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 ALG12Q9BV10 488 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 EDEM2Q9BV94 578 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 CHST8Q9H2A9 424 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 PADI1Q9ULC6 663 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 NPFFR2Q9Y5X5 522 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 V9GY05 133 aa7.97□□□□□ -1.13
PDE6A-204ENST00000613228 VAMP5O95183 116 aa7.96□□□□□ -1.13
PDE6A-204ENST00000613228 MAKP20794 623 aa7.96□□□□□ -1.13
PDE6A-204ENST00000613228 C21orf33P30042 268 aaPredicted RBP7.96□□□□□ -1.13
PDE6A-204ENST00000613228 POLR2IP36954 125 aaKnown RBP7.96□□□□□ -1.13
PDE6A-204ENST00000613228 SOX2P48431 317 aa7.96□□□□□ -1.13
PDE6A-204ENST00000613228 UBE2IP63279 158 aaKnown RBP7.96□□□□□ -1.13
PDE6A-204ENST00000613228 TCTN3Q6NUS6 607 aa7.96□□□□□ -1.13
PDE6A-204ENST00000613228 LRFN4Q6PJG9 635 aa7.96□□□□□ -1.13
PDE6A-204ENST00000613228 WDR74Q6RFH5 385 aaPredicted RBP7.96□□□□□ -1.13
PDE6A-204ENST00000613228 SYS1Q8N2H4 156 aa7.96□□□□□ -1.13
PDE6A-204ENST00000613228 OR5D14Q8NGL3 314 aa7.96□□□□□ -1.13
PDE6A-204ENST00000613228 KCNE4Q8WWG9 221 aa7.96□□□□□ -1.13
PDE6A-204ENST00000613228 LIN37Q96GY3 246 aaPredicted RBP7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms