RNA–Protein interactions for RNA: ENST00000613177.1

TARDBP-214, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-214ENST00000613177 NRGNQ92686 78 aa1.9□□□□□ -2.11
TARDBP-214ENST00000613177 SLC38A4Q969I6 547 aa1.9□□□□□ -2.11
TARDBP-214ENST00000613177 TMEM54Q969K7 222 aa1.9□□□□□ -2.11
TARDBP-214ENST00000613177 RNF185Q96GF1 192 aa1.9□□□□□ -2.11
TARDBP-214ENST00000613177 PKNOX2Q96KN3 472 aa1.9□□□□□ -2.11
TARDBP-214ENST00000613177 OR5B12Q96R08 314 aa1.9□□□□□ -2.11
TARDBP-214ENST00000613177 OR2M2Q96R28 347 aa1.9□□□□□ -2.11
TARDBP-214ENST00000613177 GABARAPL3Q9BY60 117 aa1.9□□□□□ -2.11
TARDBP-214ENST00000613177 PLGRKTQ9HBL7 147 aa1.9□□□□□ -2.11
TARDBP-214ENST00000613177 MRPL47Q9HD33 250 aaKnown RBP1.9□□□□□ -2.11
TARDBP-214ENST00000613177 GLRX2Q9NS18 164 aa1.9□□□□□ -2.11
TARDBP-214ENST00000613177 NECAP2Q9NVZ3 263 aa1.9□□□□□ -2.11
TARDBP-214ENST00000613177 SLC25A37Q9NYZ2 338 aa1.9□□□□□ -2.11
TARDBP-214ENST00000613177 DEC1Q9P2X7 70 aa1.9□□□□□ -2.11
TARDBP-214ENST00000613177 GNPTGQ9UJJ9 305 aa1.9□□□□□ -2.11
TARDBP-214ENST00000613177 ZNF223Q9UK11 482 aaPredicted RBP1.9□□□□□ -2.11
TARDBP-214ENST00000613177 PACSIN2Q9UNF0 486 aaPredicted RBP1.9□□□□□ -2.11
TARDBP-214ENST00000613177 N6AMT1Q9Y5N5 214 aa1.9□□□□□ -2.11
TARDBP-214ENST00000613177 IGLV4-60A0A075B6I1 120 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 TRBV11-1A0A0K0K1C0 115 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 ZNF816-ZNF321PA0A0X1KG74 233 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 NCF1BA6NI72 391 aaPredicted RBP1.89□□□□□ -2.11
TARDBP-214ENST00000613177 HIDE1A8MVS5 230 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 NCF1CA8MVU1 366 aaPredicted RBP1.89□□□□□ -2.11
TARDBP-214ENST00000613177 SPECC1L-ADORA2AF8WAN1 911 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 WRBO00258 174 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 CLPXO76031 633 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 OR2F2O95006 317 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 SERPINA5P05154 406 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 CSF3P09919 207 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 CRISP2P16562 243 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 MAGP20916 626 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 CMA1P23946 247 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 DCKP27707 260 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 RPS5P46782 204 aaKnown RBP1.89□□□□□ -2.11
TARDBP-214ENST00000613177 UQCRFS1P47985 274 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 CCR6P51684 374 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 NCBP2P52298 156 aaKnown RBP eCLIP1.89□□□□□ -2.11
TARDBP-214ENST00000613177 CRISP3P54108 245 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 SH3BGRP55822 239 aaPredicted RBP1.89□□□□□ -2.11
TARDBP-214ENST00000613177 NUTF2P61970 127 aaKnown RBP1.89□□□□□ -2.11
TARDBP-214ENST00000613177 IRF8Q02556 426 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 LIPEQ05469 1076 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 ARHGAP19Q14CB8 494 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 SGCAQ16586 387 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 LRRC10Q5BKY1 277 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 VAX1Q5SQQ9 334 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 SPECC1LQ69YQ0 1117 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 FRMPD2BQ6IN97 320 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 DNAJC24Q6P3W2 148 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 BZW1Q7L1Q6 419 aaKnown RBP1.89□□□□□ -2.11
TARDBP-214ENST00000613177 SLC16A14Q7RTX9 510 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 PRELID2Q8N945 189 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 BPIFCQ8NFQ6 507 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 OR4A4PQ8NGN8 299 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 OR2G3Q8NGZ4 309 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 OR6X1Q8NH79 312 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 RHEBL1Q8TAI7 183 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 GEMIN6Q8WXD5 167 aaKnown RBP1.89□□□□□ -2.11
TARDBP-214ENST00000613177 MCUR1Q96AQ8 359 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 DNAJC19Q96DA6 116 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 HDHD3Q9BSH5 251 aaPredicted RBP1.89□□□□□ -2.11
TARDBP-214ENST00000613177 TEKT3Q9BXF9 490 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 ILKAPQ9H0C8 392 aaPredicted RBP1.89□□□□□ -2.11
TARDBP-214ENST00000613177 DNTTIP1Q9H147 329 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 RPF2Q9H7B2 306 aaKnown RBP1.89□□□□□ -2.11
TARDBP-214ENST00000613177 RETNQ9HD89 108 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 KCNJ16Q9NPI9 418 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 EXD2Q9NVH0 621 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 PDP1Q9P0J1 537 aaPredicted RBP1.89□□□□□ -2.11
TARDBP-214ENST00000613177 ZNF282Q9UDV7 671 aaPredicted RBP1.89□□□□□ -2.11
TARDBP-214ENST00000613177 NUFIP1Q9UHK0 495 aaKnown RBP1.89□□□□□ -2.11
TARDBP-214ENST00000613177 ING4Q9UNL4 249 aa1.89□□□□□ -2.11
TARDBP-214ENST00000613177 MRPS18BQ9Y676 258 aaKnown RBP1.89□□□□□ -2.11
TARDBP-214ENST00000613177 LRRIQ4A6NIV6 560 aa1.88□□□□□ -2.11
TARDBP-214ENST00000613177 KMOO15229 486 aa1.88□□□□□ -2.11
TARDBP-214ENST00000613177 AKR7A2O43488 359 aa1.88□□□□□ -2.11
TARDBP-214ENST00000613177 SOX15O60248 233 aa1.88□□□□□ -2.11
TARDBP-214ENST00000613177 EEDO75530 441 aaKnown RBP1.88□□□□□ -2.11
TARDBP-214ENST00000613177 UTS2O95399 124 aa1.88□□□□□ -2.11
TARDBP-214ENST00000613177 KRT14P02533 472 aa1.88□□□□□ -2.11
TARDBP-214ENST00000613177 GNAO1P09471 354 aa1.88□□□□□ -2.11
TARDBP-214ENST00000613177 ACSM4P0C7M7 580 aa1.88□□□□□ -2.11
TARDBP-214ENST00000613177 TDGF1P13385 188 aa1.88□□□□□ -2.11
TARDBP-214ENST00000613177 HPGDP15428 266 aa1.88□□□□□ -2.11
TARDBP-214ENST00000613177 GSTM3P21266 225 aa1.88□□□□□ -2.11
TARDBP-214ENST00000613177 BCKDHBP21953 392 aa1.88□□□□□ -2.11
TARDBP-214ENST00000613177 TUBG1P23258 451 aa1.88□□□□□ -2.11
TARDBP-214ENST00000613177 SLC1A2P43004 574 aa1.88□□□□□ -2.11
TARDBP-214ENST00000613177 NAMPTP43490 491 aa1.88□□□□□ -2.11
TARDBP-214ENST00000613177 CCR8P51685 355 aa1.88□□□□□ -2.11
TARDBP-214ENST00000613177 TDGF1P3P51864 188 aa1.88□□□□□ -2.11
TARDBP-214ENST00000613177 CRISP1P54107 249 aa1.88□□□□□ -2.11
TARDBP-214ENST00000613177 SLC25A11Q02978 314 aaKnown RBP1.88□□□□□ -2.11
TARDBP-214ENST00000613177 RFX4Q33E94 735 aa1.88□□□□□ -2.11
TARDBP-214ENST00000613177 ZBED5Q49AG3 693 aa1.88□□□□□ -2.11
TARDBP-214ENST00000613177 C9orf135Q5VTT2 229 aa1.88□□□□□ -2.11
TARDBP-214ENST00000613177 C22orf42Q6IC83 251 aa1.88□□□□□ -2.11
TARDBP-214ENST00000613177 TMEM53Q6P2H8 277 aa1.88□□□□□ -2.11
TARDBP-214ENST00000613177 ZFP2Q6ZN57 461 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms