RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 C1QL3Q5VWW1 255 aa6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 ZNF704Q6ZNC4 412 aaPredicted RBP6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 DCXRQ7Z4W1 244 aa6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 OR2AK2Q8NG84 335 aa6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 ST8SIA4Q92187 359 aa6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 ZNF775Q96BV0 537 aaPredicted RBP6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 TCTN2Q96GX1 697 aa6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 PGAM5Q96HS1 289 aa6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 DCBLD2Q96PD2 775 aa6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 VRK1Q99986 396 aaPredicted RBP6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 MCOLN1Q9GZU1 580 aa6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 GHITMQ9H3K2 345 aa6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 TAS2R5Q9NYW4 299 aa6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 GMEB2Q9UKD1 530 aa6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 FBXO4Q9UKT5 387 aa6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 A0A0B4J2A0 478 aa6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 GGT3PA6NGU5 568 aa6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 TNFRSF10CO14798 259 aa6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 AKR7A3O95154 331 aa6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 HOXB5P09067 269 aa6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 ACSM4P0C7M7 580 aa6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 ZNF806P0C7X5 589 aa6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 PRKACAP17612 351 aa6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 ACHEP22303 614 aa6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 LBX1P52954 281 aa6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 CAMK2DQ13557 499 aa6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 ABCA11PQ4W5N1 156 aa6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 FAM76BQ5HYJ3 339 aa6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 PHF19Q5T6S3 580 aa6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 STOML3Q8TAV4 291 aa6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 ADAMTS18Q8TE60 1221 aa6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 OR5B2Q96R09 309 aa6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 RSPO3Q9BXY4 272 aaPredicted RBP6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 OBP2AQ9NY56 170 aa6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 SHPKQ9UHJ6 478 aa6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 ZMIZ1Q9ULJ6 1067 aa6.24□□□□□ -1.41
SYNPO2-206ENST00000610556 TRAV36DV7A0A075B6V5 113 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 M0R036 132 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 CFDP00746 253 aaPredicted RBP6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 PVALBP20472 110 aaPredicted RBP6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 RBMXP38159 391 aaKnown RBP6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 CSNK2A1P68400 391 aaPredicted RBP6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 CHRFAM7AQ494W8 412 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 SMUG1Q53HV7 270 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 TMEM244Q5VVB8 128 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 B3GNTL1Q67FW5 361 aaPredicted RBP6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 PWWP2BQ6NUJ5 590 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 ZNF585AQ6P3V2 769 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 SHISA5Q8N114 240 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 GABRG1Q8N1C3 465 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 NPEPL1Q8NDH3 523 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 CSNK2A3Q8NEV1 391 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 OR4S1Q8NGB4 309 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 OR51A4Q8NGJ6 313 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 NUDCD2Q8WVJ2 157 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 KCNJ15Q99712 375 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 ZNF304Q9HCX3 659 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 FOXJ3Q9UPW0 622 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 RHBDD3Q9Y3P4 386 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 RBM7Q9Y580 266 aaKnown RBP6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 TOR1AO14656 332 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 LDOC1O95751 146 aaPredicted RBP6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 IFNA21P01568 189 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 ERCC1P07992 297 aaPredicted RBP6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 PI3P19957 117 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 CSNK1EP49674 416 aaKnown RBP6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 NANOS3P60323 173 aaKnown RBP6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 HNRNPKP61978 463 aaKnown RBP eCLIP6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 CD226Q15762 336 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 ZNF74Q16587 644 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 CDONQ4KMG0 1287 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 MANEAQ5SRI9 462 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 GLDNQ6ZMI3 551 aaPredicted RBP6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 ELP5Q8TE02 316 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 SCARB1Q8WTV0 552 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 RADILQ96JH8 1075 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 URM1Q9BTM9 101 aaKnown RBP6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 SMIM3Q9BZL3 60 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 TINAGL1Q9GZM7 467 aaPredicted RBP6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 HRH4Q9H3N8 390 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 MED29Q9NX70 200 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 ST6GALNAC2Q9UJ37 374 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 ZNF223Q9UK11 482 aaPredicted RBP6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 C14orf166Q9Y224 244 aaKnown RBP6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 MEMO1Q9Y316 297 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 HEATR5BQ9P2D3 2071 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 TRAV8-7A0A075B6U6 113 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 KRBOX1C9JBD0 128 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 CYR61O00622 381 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 OGG1O15527 345 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 DUX1O43812 170 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 PMP2P02689 132 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 CTSBP07858 339 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 MYF5P13349 255 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 RAB3AP20336 220 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 HSD17B7P56937 341 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 TAGLNQ01995 201 aaKnown RBP6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 SHHQ15465 462 aa6.23□□□□□ -1.41
SYNPO2-206ENST00000610556 WDR38Q5JTN6 314 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms