RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 SYT9Q86SS6 491 aa12.4□□□□□ -0.42
HDDC2-206ENST00000608461 SPATA24Q86W54 205 aa12.4□□□□□ -0.42
HDDC2-206ENST00000608461 MUC15Q8N387 334 aa12.4□□□□□ -0.42
HDDC2-206ENST00000608461 CLDN22Q8N7P3 220 aa12.4□□□□□ -0.42
HDDC2-206ENST00000608461 PAPD5Q8NDF8 572 aaKnown RBP12.4□□□□□ -0.42
HDDC2-206ENST00000608461 FANK1Q8TC84 345 aa12.4□□□□□ -0.42
HDDC2-206ENST00000608461 Q96M85 177 aa12.4□□□□□ -0.42
HDDC2-206ENST00000608461 TRAF4Q9BUZ4 470 aaPredicted RBP12.4□□□□□ -0.42
HDDC2-206ENST00000608461 DGCR6LQ9BY27 220 aa12.4□□□□□ -0.42
HDDC2-206ENST00000608461 LRMDAQ9H2I8 198 aa12.4□□□□□ -0.42
HDDC2-206ENST00000608461 ZNF442Q9H7R0 627 aa12.4□□□□□ -0.42
HDDC2-206ENST00000608461 IL20Q9NYY1 176 aa12.4□□□□□ -0.42
HDDC2-206ENST00000608461 VSX1Q9NZR4 365 aaPredicted RBP12.4□□□□□ -0.42
HDDC2-206ENST00000608461 SLC7A8Q9UHI5 535 aa12.4□□□□□ -0.42
HDDC2-206ENST00000608461 UGT2A1Q9Y4X1 527 aa12.4□□□□□ -0.42
HDDC2-206ENST00000608461 CELSR1Q9NYQ6 3014 aa12.4□□□□□ -0.43
HDDC2-206ENST00000608461 IGHV2OR16-5A0A0B4J2B6 119 aa12.39□□□□□ -0.43
HDDC2-206ENST00000608461 ATP6V1G2-DDX39BF2Z307 99 aa12.39□□□□□ -0.43
HDDC2-206ENST00000608461 SLC2A10O95528 541 aa12.39□□□□□ -0.43
HDDC2-206ENST00000608461 CST2P09228 141 aa12.39□□□□□ -0.43
HDDC2-206ENST00000608461 PTH2RP49190 550 aa12.39□□□□□ -0.43
HDDC2-206ENST00000608461 PCBD1P61457 104 aa12.39□□□□□ -0.43
HDDC2-206ENST00000608461 PLP2Q04941 152 aa12.39□□□□□ -0.43
HDDC2-206ENST00000608461 PIGFQ07326 219 aa12.39□□□□□ -0.43
HDDC2-206ENST00000608461 NPRL3Q12980 569 aa12.39□□□□□ -0.43
HDDC2-206ENST00000608461 KRR1Q13601 381 aaKnown RBP12.39□□□□□ -0.43
HDDC2-206ENST00000608461 MESTQ5EB52 335 aa12.39□□□□□ -0.43
HDDC2-206ENST00000608461 CD300LDQ6UXZ3 194 aa12.39□□□□□ -0.43
HDDC2-206ENST00000608461 THSD4Q6ZMP0 1018 aa12.39□□□□□ -0.43
HDDC2-206ENST00000608461 ZNF620Q6ZNG0 422 aa12.39□□□□□ -0.43
HDDC2-206ENST00000608461 RASSF6Q6ZTQ3 369 aa12.39□□□□□ -0.43
HDDC2-206ENST00000608461 TGIF2LYQ8IUE0 185 aa12.39□□□□□ -0.43
HDDC2-206ENST00000608461 OR52L1Q8NGH7 329 aa12.39□□□□□ -0.43
HDDC2-206ENST00000608461 OR1J2Q8NGS2 313 aa12.39□□□□□ -0.43
HDDC2-206ENST00000608461 NABP1Q96AH0 204 aa12.39□□□□□ -0.43
HDDC2-206ENST00000608461 SH3GL3Q99963 347 aa12.39□□□□□ -0.43
HDDC2-206ENST00000608461 RNF121Q9H920 327 aa12.39□□□□□ -0.43
HDDC2-206ENST00000608461 CA10Q9NS85 328 aa12.39□□□□□ -0.43
HDDC2-206ENST00000608461 IER3IP1Q9Y5U9 82 aa12.39□□□□□ -0.43
HDDC2-206ENST00000608461 PRRC2AP48634 2157 aaKnown RBP12.39□□□□□ -0.43
HDDC2-206ENST00000608461 TEX13CA0A0J9YWL9 993 aa12.38□□□□□ -0.43
HDDC2-206ENST00000608461 IQCMA0A1B0GVH7 501 aa12.38□□□□□ -0.43
HDDC2-206ENST00000608461 GNGT2O14610 69 aa12.38□□□□□ -0.43
HDDC2-206ENST00000608461 GASTP01350 101 aa12.38□□□□□ -0.43
HDDC2-206ENST00000608461 CD8AP01732 235 aa12.38□□□□□ -0.43
HDDC2-206ENST00000608461 MMP7P09237 267 aaPredicted RBP12.38□□□□□ -0.43
HDDC2-206ENST00000608461 ZNF35P13682 527 aa12.38□□□□□ -0.43
HDDC2-206ENST00000608461 NOS3P29474 1203 aa12.38□□□□□ -0.43
HDDC2-206ENST00000608461 CRABP1P29762 137 aa12.38□□□□□ -0.43
HDDC2-206ENST00000608461 ADAM8P78325 824 aa12.38□□□□□ -0.43
HDDC2-206ENST00000608461 FMODQ06828 376 aa12.38□□□□□ -0.43
HDDC2-206ENST00000608461 DNM1P34Q6PK57 102 aa12.38□□□□□ -0.43
HDDC2-206ENST00000608461 B3GLCTQ6Y288 498 aa12.38□□□□□ -0.43
HDDC2-206ENST00000608461 ALDH16A1Q8IZ83 802 aa12.38□□□□□ -0.43
HDDC2-206ENST00000608461 AQP11Q8NBQ7 271 aa12.38□□□□□ -0.43
HDDC2-206ENST00000608461 NSMAFQ92636 917 aa12.38□□□□□ -0.43
HDDC2-206ENST00000608461 ERMAPQ96PL5 475 aaPredicted RBP12.38□□□□□ -0.43
HDDC2-206ENST00000608461 IFT27Q9BW83 186 aa12.38□□□□□ -0.43
HDDC2-206ENST00000608461 CCNB1IP1Q9NPC3 277 aa12.38□□□□□ -0.43
HDDC2-206ENST00000608461 BAIAP2Q9UQB8 552 aa12.38□□□□□ -0.43
HDDC2-206ENST00000608461 CDH10Q9Y6N8 788 aa12.38□□□□□ -0.43
HDDC2-206ENST00000608461 PMF1-BGLAPU3KQ54 211 aa12.38□□□□□ -0.43
HDDC2-206ENST00000608461 ITPR3Q14573 2671 aa12.38□□□□□ -0.43
HDDC2-206ENST00000608461 PLCE1Q9P212 2302 aa12.38□□□□□ -0.43
HDDC2-206ENST00000608461 IGKV1D-43A0A0B4J1Z2 117 aa12.37□□□□□ -0.43
HDDC2-206ENST00000608461 C12orf71A8MTZ7 269 aa12.37□□□□□ -0.43
HDDC2-206ENST00000608461 B9A039 149 aa12.37□□□□□ -0.43
HDDC2-206ENST00000608461 KHDRBS3O75525 346 aaKnown RBP12.37□□□□□ -0.43
HDDC2-206ENST00000608461 SNAP29O95721 258 aa12.37□□□□□ -0.43
HDDC2-206ENST00000608461 CELA3BP08861 270 aa12.37□□□□□ -0.43
HDDC2-206ENST00000608461 MSR1P21757 451 aa12.37□□□□□ -0.43
HDDC2-206ENST00000608461 NR4A1P22736 598 aa12.37□□□□□ -0.43
HDDC2-206ENST00000608461 CALCRP30988 508 aa12.37□□□□□ -0.43
HDDC2-206ENST00000608461 SERPINF1P36955 418 aa12.37□□□□□ -0.43
HDDC2-206ENST00000608461 ARHGDIAP52565 204 aa12.37□□□□□ -0.43
HDDC2-206ENST00000608461 RPS23P62266 143 aaKnown RBP12.37□□□□□ -0.43
HDDC2-206ENST00000608461 GALK2Q01415 458 aa12.37□□□□□ -0.43
HDDC2-206ENST00000608461 DAG1Q14118 895 aa12.37□□□□□ -0.43
HDDC2-206ENST00000608461 EFNB3Q15768 340 aa12.37□□□□□ -0.43
HDDC2-206ENST00000608461 SGCAQ16586 387 aa12.37□□□□□ -0.43
HDDC2-206ENST00000608461 C11orf71Q6IPW1 123 aa12.37□□□□□ -0.43
HDDC2-206ENST00000608461 C1orf174Q8IYL3 243 aa12.37□□□□□ -0.43
HDDC2-206ENST00000608461 LRRC18Q8N456 261 aa12.37□□□□□ -0.43
HDDC2-206ENST00000608461 OR9Q2Q8NGE9 314 aa12.37□□□□□ -0.43
HDDC2-206ENST00000608461 GIPC3Q8TF64 312 aa12.37□□□□□ -0.43
HDDC2-206ENST00000608461 RASD2Q96D21 266 aa12.37□□□□□ -0.43
HDDC2-206ENST00000608461 SAMD8Q96LT4 415 aa12.37□□□□□ -0.43
HDDC2-206ENST00000608461 SEC61A2Q9H9S3 476 aa12.37□□□□□ -0.43
HDDC2-206ENST00000608461 BARX1Q9HBU1 254 aaPredicted RBP12.37□□□□□ -0.43
HDDC2-206ENST00000608461 NOX3Q9HBY0 568 aa12.37□□□□□ -0.43
HDDC2-206ENST00000608461 DNAJB9Q9UBS3 223 aa12.37□□□□□ -0.43
HDDC2-206ENST00000608461 IL20RAQ9UHF4 553 aa12.37□□□□□ -0.43
HDDC2-206ENST00000608461 TIMM10BQ9Y5J6 103 aa12.37□□□□□ -0.43
HDDC2-206ENST00000608461 U3KQV3 271 aa12.37□□□□□ -0.43
HDDC2-206ENST00000608461 H7C417 338 aa12.36□□□□□ -0.43
HDDC2-206ENST00000608461 EBAG9O00559 213 aa12.36□□□□□ -0.43
HDDC2-206ENST00000608461 SOCS2O14508 198 aa12.36□□□□□ -0.43
HDDC2-206ENST00000608461 FKBP6O75344 327 aa12.36□□□□□ -0.43
HDDC2-206ENST00000608461 PPP1R3DO95685 299 aa12.36□□□□□ -0.43
HDDC2-206ENST00000608461 RENP00797 406 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms