RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 EMC7Q9NPA0 242 aa12.51□□□□□ -0.41
HDDC2-204ENST00000608295 MYEF2Q9P2K5 600 aaKnown RBP12.51□□□□□ -0.41
HDDC2-204ENST00000608295 ADAM21Q9UKJ8 722 aa12.51□□□□□ -0.41
HDDC2-204ENST00000608295 TLN2Q9Y4G6 2542 aa12.51□□□□□ -0.41
HDDC2-204ENST00000608295 CHD3Q12873 2000 aaKnown RBP12.5□□□□□ -0.41
HDDC2-204ENST00000608295 HEXAP06865 529 aa12.5□□□□□ -0.41
HDDC2-204ENST00000608295 BMP4P12644 408 aa12.5□□□□□ -0.41
HDDC2-204ENST00000608295 ZNF32P17041 273 aa12.5□□□□□ -0.41
HDDC2-204ENST00000608295 ITGA2P17301 1181 aa12.5□□□□□ -0.41
HDDC2-204ENST00000608295 ERFP50548 548 aa12.5□□□□□ -0.41
HDDC2-204ENST00000608295 FXNQ16595 210 aa12.5□□□□□ -0.41
HDDC2-204ENST00000608295 IQCCQ4KMZ1 466 aa12.5□□□□□ -0.41
HDDC2-204ENST00000608295 PABPC1L2AQ5JQF8 200 aa12.5□□□□□ -0.41
HDDC2-204ENST00000608295 C10orf128Q5T292 105 aa12.5□□□□□ -0.41
HDDC2-204ENST00000608295 C1QTNF12Q5T7M4 302 aa12.5□□□□□ -0.41
HDDC2-204ENST00000608295 SLC25A47Q6Q0C1 308 aa12.5□□□□□ -0.41
HDDC2-204ENST00000608295 TMPRSS11FQ6ZWK6 438 aa12.5□□□□□ -0.41
HDDC2-204ENST00000608295 LRP11Q86VZ4 500 aa12.5□□□□□ -0.41
HDDC2-204ENST00000608295 OR9Q2Q8NGE9 314 aa12.5□□□□□ -0.41
HDDC2-204ENST00000608295 BCAS4Q8TDM0 211 aa12.5□□□□□ -0.41
HDDC2-204ENST00000608295 NABP1Q96AH0 204 aa12.5□□□□□ -0.41
HDDC2-204ENST00000608295 RBP7Q96R05 134 aa12.5□□□□□ -0.41
HDDC2-204ENST00000608295 RHNO1Q9BSD3 238 aa12.5□□□□□ -0.41
HDDC2-204ENST00000608295 ALG12Q9BV10 488 aa12.5□□□□□ -0.41
HDDC2-204ENST00000608295 GRIP2Q9C0E4 1043 aa12.5□□□□□ -0.41
HDDC2-204ENST00000608295 NDEL1Q9GZM8 345 aa12.5□□□□□ -0.41
HDDC2-204ENST00000608295 STX18Q9P2W9 335 aaKnown RBP12.5□□□□□ -0.41
HDDC2-204ENST00000608295 SIGLEC7Q9Y286 467 aa12.5□□□□□ -0.41
HDDC2-204ENST00000608295 IER3IP1Q9Y5U9 82 aa12.5□□□□□ -0.41
HDDC2-204ENST00000608295 FKBP7Q9Y680 259 aa12.5□□□□□ -0.41
HDDC2-204ENST00000608295 CSPG4Q6UVK1 2322 aa12.49□□□□□ -0.41
HDDC2-204ENST00000608295 A6NIZ1 184 aa12.49□□□□□ -0.41
HDDC2-204ENST00000608295 NPIPB13A6NJU9 1138 aa12.49□□□□□ -0.41
HDDC2-204ENST00000608295 B9A039 149 aa12.49□□□□□ -0.41
HDDC2-204ENST00000608295 NPIPB4C9JG80 1138 aa12.49□□□□□ -0.41
HDDC2-204ENST00000608295 XKRYO14609 159 aa12.49□□□□□ -0.41
HDDC2-204ENST00000608295 NDUFB2O95178 105 aa12.49□□□□□ -0.41
HDDC2-204ENST00000608295 SERPINA5P05154 406 aa12.49□□□□□ -0.41
HDDC2-204ENST00000608295 SCG5P05408 212 aa12.49□□□□□ -0.41
HDDC2-204ENST00000608295 CD14P08571 375 aa12.49□□□□□ -0.41
HDDC2-204ENST00000608295 T-ENOLP0DO92 83 aa12.49□□□□□ -0.41
HDDC2-204ENST00000608295 CALB2P22676 271 aa12.49□□□□□ -0.41
HDDC2-204ENST00000608295 NR4A1P22736 598 aa12.49□□□□□ -0.41
HDDC2-204ENST00000608295 LAP3P28838 519 aa12.49□□□□□ -0.41
HDDC2-204ENST00000608295 ALDH3B1P43353 468 aa12.49□□□□□ -0.41
HDDC2-204ENST00000608295 MNAT1P51948 309 aa12.49□□□□□ -0.41
HDDC2-204ENST00000608295 EFNA4P52798 201 aa12.49□□□□□ -0.41
HDDC2-204ENST00000608295 FXYD6P3P58550 94 aa12.49□□□□□ -0.41
HDDC2-204ENST00000608295 RAP1BP61224 184 aa12.49□□□□□ -0.41
HDDC2-204ENST00000608295 RAP1AP62834 184 aa12.49□□□□□ -0.41
HDDC2-204ENST00000608295 MRPS34P82930 218 aaKnown RBP12.49□□□□□ -0.41
HDDC2-204ENST00000608295 TAF11Q15544 211 aa12.49□□□□□ -0.41
HDDC2-204ENST00000608295 SPATA46Q5T0L3 261 aa12.49□□□□□ -0.41
HDDC2-204ENST00000608295 ARIH2OSQ8N7S6 290 aa12.49□□□□□ -0.41
HDDC2-204ENST00000608295 FAM168AQ92567 244 aa12.49□□□□□ -0.41
HDDC2-204ENST00000608295 DHRS1Q96LJ7 313 aa12.49□□□□□ -0.41
HDDC2-204ENST00000608295 KCNN2Q9H2S1 579 aa12.49□□□□□ -0.41
HDDC2-204ENST00000608295 ZNF442Q9H7R0 627 aa12.49□□□□□ -0.41
HDDC2-204ENST00000608295 KRCC1Q9NPI7 259 aaPredicted RBP12.49□□□□□ -0.41
HDDC2-204ENST00000608295 DUSP13Q9UII6 198 aa12.49□□□□□ -0.41
HDDC2-204ENST00000608295 CMAHPQ9Y471 501 aa12.49□□□□□ -0.41
HDDC2-204ENST00000608295 RTTNQ86VV8 2226 aa12.49□□□□□ -0.41
HDDC2-204ENST00000608295 IQCMA0A1B0GVH7 501 aa12.48□□□□□ -0.41
HDDC2-204ENST00000608295 A0A1W2PPW3 197 aa12.48□□□□□ -0.41
HDDC2-204ENST00000608295 TCRBV5S2A0A599 114 aa12.48□□□□□ -0.41
HDDC2-204ENST00000608295 INAFM1C9JVW0 142 aa12.48□□□□□ -0.41
HDDC2-204ENST00000608295 ENTPD5O75356 428 aa12.48□□□□□ -0.41
HDDC2-204ENST00000608295 UBOX5O94941 541 aa12.48□□□□□ -0.41
HDDC2-204ENST00000608295 GPANK1O95872 356 aa12.48□□□□□ -0.41
HDDC2-204ENST00000608295 LCKP06239 509 aa12.48□□□□□ -0.41
HDDC2-204ENST00000608295 ADRA2AP08913 450 aa12.48□□□□□ -0.41
HDDC2-204ENST00000608295 MMP7P09237 267 aaPredicted RBP12.48□□□□□ -0.41
HDDC2-204ENST00000608295 NR2C1P13056 603 aa12.48□□□□□ -0.41
HDDC2-204ENST00000608295 ZNF35P13682 527 aa12.48□□□□□ -0.41
HDDC2-204ENST00000608295 CTLA4P16410 223 aa12.48□□□□□ -0.41
HDDC2-204ENST00000608295 PAX7P23759 505 aa12.48□□□□□ -0.41
HDDC2-204ENST00000608295 APLNRP35414 380 aa12.48□□□□□ -0.41
HDDC2-204ENST00000608295 CENPAP49450 140 aa12.48□□□□□ -0.41
HDDC2-204ENST00000608295 MS4A2Q01362 244 aa12.48□□□□□ -0.41
HDDC2-204ENST00000608295 PLP2Q04941 152 aa12.48□□□□□ -0.41
HDDC2-204ENST00000608295 TBC1D28Q2M2D7 210 aa12.48□□□□□ -0.41
HDDC2-204ENST00000608295 FAM205BPQ63HN1 556 aa12.48□□□□□ -0.41
HDDC2-204ENST00000608295 UGT2A3Q6UWM9 527 aa12.48□□□□□ -0.41
HDDC2-204ENST00000608295 PTCHD4Q6ZW05 846 aa12.48□□□□□ -0.41
HDDC2-204ENST00000608295 FAM122BQ7Z309 247 aa12.48□□□□□ -0.41
HDDC2-204ENST00000608295 ZER1Q7Z7L7 766 aa12.48□□□□□ -0.41
HDDC2-204ENST00000608295 DHFR2Q86XF0 187 aa12.48□□□□□ -0.41
HDDC2-204ENST00000608295 CPEB3Q8NE35 698 aaKnown RBP12.48□□□□□ -0.41
HDDC2-204ENST00000608295 ERMAPQ96PL5 475 aaPredicted RBP12.48□□□□□ -0.41
HDDC2-204ENST00000608295 FUZQ9BT04 418 aa12.48□□□□□ -0.41
HDDC2-204ENST00000608295 THTPAQ9BU02 230 aa12.48□□□□□ -0.41
HDDC2-204ENST00000608295 SYT4Q9H2B2 425 aa12.48□□□□□ -0.41
HDDC2-204ENST00000608295 FN3KQ9H479 309 aa12.48□□□□□ -0.41
HDDC2-204ENST00000608295 VNN3Q9NY84 501 aa12.48□□□□□ -0.41
HDDC2-204ENST00000608295 ACTR3BQ9P1U1 418 aa12.48□□□□□ -0.41
HDDC2-204ENST00000608295 SLC7A8Q9UHI5 535 aa12.48□□□□□ -0.41
HDDC2-204ENST00000608295 TMCC3Q9ULS5 477 aa12.48□□□□□ -0.41
HDDC2-204ENST00000608295 SPEF1Q9Y4P9 236 aa12.48□□□□□ -0.41
HDDC2-204ENST00000608295 ZANQ9Y493 2812 aa12.48□□□□□ -0.41
HDDC2-204ENST00000608295 FN1P02751 2386 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms