RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 HMGA2P52926 109 aa16.64■□□□□ 0.26
SRSF4-206ENST00000605204 GALK2Q01415 458 aa16.64■□□□□ 0.26
SRSF4-206ENST00000605204 SLC25A47Q6Q0C1 308 aa16.64■□□□□ 0.26
SRSF4-206ENST00000605204 SMARCD3Q6STE5 483 aa16.64■□□□□ 0.26
SRSF4-206ENST00000605204 FAM122BQ7Z309 247 aa16.64■□□□□ 0.26
SRSF4-206ENST00000605204 BIVMQ86UB2 503 aa16.64■□□□□ 0.26
SRSF4-206ENST00000605204 MEX3DQ86XN8 651 aaKnown RBP16.64■□□□□ 0.26
SRSF4-206ENST00000605204 OR1J2Q8NGS2 313 aa16.64■□□□□ 0.26
SRSF4-206ENST00000605204 COX4I2Q96KJ9 171 aa16.64■□□□□ 0.26
SRSF4-206ENST00000605204 LRMDAQ9H2I8 198 aa16.64■□□□□ 0.26
SRSF4-206ENST00000605204 SEC61A2Q9H9S3 476 aa16.64■□□□□ 0.26
SRSF4-206ENST00000605204 SLC7A8Q9UHI5 535 aa16.64■□□□□ 0.26
SRSF4-206ENST00000605204 UGT2A1Q9Y4X1 527 aa16.64■□□□□ 0.26
SRSF4-206ENST00000605204 ZANQ9Y493 2812 aa16.64■□□□□ 0.25
SRSF4-206ENST00000605204 SLC2A10O95528 541 aa16.64■□□□□ 0.25
SRSF4-206ENST00000605204 OR4A8P0C604 315 aa16.64■□□□□ 0.25
SRSF4-206ENST00000605204 NR4A1P22736 598 aa16.64■□□□□ 0.25
SRSF4-206ENST00000605204 DSCR9P59020 149 aa16.64■□□□□ 0.25
SRSF4-206ENST00000605204 PCBD1P61457 104 aa16.64■□□□□ 0.25
SRSF4-206ENST00000605204 ERVK-25P63136 954 aa16.64■□□□□ 0.25
SRSF4-206ENST00000605204 MYBPC1Q00872 1141 aa16.64■□□□□ 0.25
SRSF4-206ENST00000605204 HGFACQ04756 655 aa16.64■□□□□ 0.25
SRSF4-206ENST00000605204 DAG1Q14118 895 aa16.64■□□□□ 0.25
SRSF4-206ENST00000605204 RAB35Q15286 201 aa16.64■□□□□ 0.25
SRSF4-206ENST00000605204 ADIPOQQ15848 244 aa16.64■□□□□ 0.25
SRSF4-206ENST00000605204 SWI5Q1ZZU3 235 aa16.64■□□□□ 0.25
SRSF4-206ENST00000605204 FAM27BQ5VT28 67 aa16.64■□□□□ 0.25
SRSF4-206ENST00000605204 RPL13AP3Q6NVV1 102 aa16.64■□□□□ 0.25
SRSF4-206ENST00000605204 FOXL2NBQ6ZUU3 175 aa16.64■□□□□ 0.25
SRSF4-206ENST00000605204 ZER1Q7Z7L7 766 aa16.64■□□□□ 0.25
SRSF4-206ENST00000605204 MYPOPQ86VE0 399 aaPredicted RBP16.64■□□□□ 0.25
SRSF4-206ENST00000605204 FANK1Q8TC84 345 aa16.64■□□□□ 0.25
SRSF4-206ENST00000605204 CCDC124Q96CT7 223 aaKnown RBP16.64■□□□□ 0.25
SRSF4-206ENST00000605204 SH3GL3Q99963 347 aa16.64■□□□□ 0.25
SRSF4-206ENST00000605204 THTPAQ9BU02 230 aa16.64■□□□□ 0.25
SRSF4-206ENST00000605204 RNF121Q9H920 327 aa16.64■□□□□ 0.25
SRSF4-206ENST00000605204 ADAM18Q9Y3Q7 739 aa16.64■□□□□ 0.25
SRSF4-206ENST00000605204 IQCMA0A1B0GVH7 501 aa16.63■□□□□ 0.25
SRSF4-206ENST00000605204 PRSS37A4D1T9 235 aa16.63■□□□□ 0.25
SRSF4-206ENST00000605204 IMPA2O14732 288 aa16.63■□□□□ 0.25
SRSF4-206ENST00000605204 UBOX5O94941 541 aa16.63■□□□□ 0.25
SRSF4-206ENST00000605204 SNAP29O95721 258 aa16.63■□□□□ 0.25
SRSF4-206ENST00000605204 TXNDC12O95881 172 aa16.63■□□□□ 0.25
SRSF4-206ENST00000605204 IGHV4-39P01824 125 aa16.63■□□□□ 0.25
SRSF4-206ENST00000605204 INHBBP09529 407 aa16.63■□□□□ 0.25
SRSF4-206ENST00000605204 CSF3P09919 207 aa16.63■□□□□ 0.25
SRSF4-206ENST00000605204 ZNF35P13682 527 aa16.63■□□□□ 0.25
SRSF4-206ENST00000605204 SLC6A6P31641 620 aa16.63■□□□□ 0.25
SRSF4-206ENST00000605204 FMODQ06828 376 aa16.63■□□□□ 0.25
SRSF4-206ENST00000605204 SNTB2Q13425 540 aaKnown RBP16.63■□□□□ 0.25
SRSF4-206ENST00000605204 KRR1Q13601 381 aaKnown RBP16.63■□□□□ 0.25
SRSF4-206ENST00000605204 CLEC12BQ2HXU8 276 aa16.63■□□□□ 0.25
SRSF4-206ENST00000605204 C1orf94Q6P1W5 598 aa16.63■□□□□ 0.25
SRSF4-206ENST00000605204 MS4A3Q96HJ5 214 aa16.63■□□□□ 0.25
SRSF4-206ENST00000605204 CCNB1IP1Q9NPC3 277 aa16.63■□□□□ 0.25
SRSF4-206ENST00000605204 FKBP7Q9Y680 259 aa16.63■□□□□ 0.25
SRSF4-206ENST00000605204 ANK3Q12955 4377 aaKnown RBP16.62■□□□□ 0.25
SRSF4-206ENST00000605204 AQP12BA6NM10 295 aa16.62■□□□□ 0.25
SRSF4-206ENST00000605204 ERCC1P07992 297 aaPredicted RBP16.62■□□□□ 0.25
SRSF4-206ENST00000605204 RAP2AP10114 183 aa16.62■□□□□ 0.25
SRSF4-206ENST00000605204 ZNF26P17031 533 aaPredicted RBP16.62■□□□□ 0.25
SRSF4-206ENST00000605204 GLRXP35754 106 aa16.62■□□□□ 0.25
SRSF4-206ENST00000605204 EVX1P49640 407 aa16.62■□□□□ 0.25
SRSF4-206ENST00000605204 PPOXP50336 477 aa16.62■□□□□ 0.25
SRSF4-206ENST00000605204 RASSF2P50749 326 aa16.62■□□□□ 0.25
SRSF4-206ENST00000605204 NUDT6P53370 316 aa16.62■□□□□ 0.25
SRSF4-206ENST00000605204 TSPAN31Q12999 210 aa16.62■□□□□ 0.25
SRSF4-206ENST00000605204 RAB39AQ14964 217 aa16.62■□□□□ 0.25
SRSF4-206ENST00000605204 TBC1D28Q2M2D7 210 aa16.62■□□□□ 0.25
SRSF4-206ENST00000605204 DNM1P34Q6PK57 102 aa16.62■□□□□ 0.25
SRSF4-206ENST00000605204 UNQ6126/PRO20091Q6UXV3 157 aa16.62■□□□□ 0.25
SRSF4-206ENST00000605204 SYT9Q86SS6 491 aa16.62■□□□□ 0.25
SRSF4-206ENST00000605204 AQP12AQ8IXF9 295 aa16.62■□□□□ 0.25
SRSF4-206ENST00000605204 SLC30A7Q8NEW0 376 aa16.62■□□□□ 0.25
SRSF4-206ENST00000605204 GNPDA2Q8TDQ7 276 aa16.62■□□□□ 0.25
SRSF4-206ENST00000605204 NSMAFQ92636 917 aa16.62■□□□□ 0.25
SRSF4-206ENST00000605204 NABP1Q96AH0 204 aa16.62■□□□□ 0.25
SRSF4-206ENST00000605204 FBXO17Q96EF6 278 aa16.62■□□□□ 0.25
SRSF4-206ENST00000605204 Q96M85 177 aa16.62■□□□□ 0.25
SRSF4-206ENST00000605204 PLK3Q9H4B4 646 aa16.62■□□□□ 0.25
SRSF4-206ENST00000605204 CMAHPQ9Y471 501 aa16.62■□□□□ 0.25
SRSF4-206ENST00000605204 LYVE1Q9Y5Y7 322 aa16.62■□□□□ 0.25
SRSF4-206ENST00000605204 TLN2Q9Y4G6 2542 aa16.61■□□□□ 0.25
SRSF4-206ENST00000605204 TEX13CA0A0J9YWL9 993 aa16.61■□□□□ 0.25
SRSF4-206ENST00000605204 C12orf71A8MTZ7 269 aa16.61■□□□□ 0.25
SRSF4-206ENST00000605204 TNFRSF11BO00300 401 aa16.61■□□□□ 0.25
SRSF4-206ENST00000605204 ACOT8O14734 319 aa16.61■□□□□ 0.25
SRSF4-206ENST00000605204 ARPC3O15145 178 aa16.61■□□□□ 0.25
SRSF4-206ENST00000605204 CST2P09228 141 aa16.61■□□□□ 0.25
SRSF4-206ENST00000605204 MMP7P09237 267 aaPredicted RBP16.61■□□□□ 0.25
SRSF4-206ENST00000605204 MSR1P21757 451 aa16.61■□□□□ 0.25
SRSF4-206ENST00000605204 GSSP48637 474 aa16.61■□□□□ 0.25
SRSF4-206ENST00000605204 EFNA4P52798 201 aa16.61■□□□□ 0.25
SRSF4-206ENST00000605204 MS4A2Q01362 244 aa16.61■□□□□ 0.25
SRSF4-206ENST00000605204 HSF2Q03933 536 aa16.61■□□□□ 0.25
SRSF4-206ENST00000605204 MST1LQ2TV78 715 aa16.61■□□□□ 0.25
SRSF4-206ENST00000605204 RFX4Q33E94 735 aa16.61■□□□□ 0.25
SRSF4-206ENST00000605204 MESTQ5EB52 335 aa16.61■□□□□ 0.25
SRSF4-206ENST00000605204 VHLLQ6RSH7 139 aa16.61■□□□□ 0.25
SRSF4-206ENST00000605204 ZNF584Q8IVC4 421 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms