RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 RIMS3Q9UJD0 308 aa11.22□□□□□ -0.61
RPS28-204ENST00000602140 A0A0G2JND7 137 aa11.21□□□□□ -0.61
RPS28-204ENST00000602140 CENPBD1B2RD01 187 aa11.21□□□□□ -0.61
RPS28-204ENST00000602140 FBP2O00757 339 aa11.21□□□□□ -0.61
RPS28-204ENST00000602140 MGRN1O60291 552 aa11.21□□□□□ -0.61
RPS28-204ENST00000602140 MPZL1O95297 269 aa11.21□□□□□ -0.61
RPS28-204ENST00000602140 SLC2A10O95528 541 aa11.21□□□□□ -0.61
RPS28-204ENST00000602140 PNPP00491 289 aa11.21□□□□□ -0.61
RPS28-204ENST00000602140 IGHV3-13P01766 116 aa11.21□□□□□ -0.61
RPS28-204ENST00000602140 STOMP27105 288 aa11.21□□□□□ -0.61
RPS28-204ENST00000602140 RBM34P42696 430 aaKnown RBP11.21□□□□□ -0.61
RPS28-204ENST00000602140 ZNF133P52736 654 aaPredicted RBP11.21□□□□□ -0.61
RPS28-204ENST00000602140 SCGB2A2Q13296 93 aa11.21□□□□□ -0.61
RPS28-204ENST00000602140 PIN1Q13526 163 aaPredicted RBP11.21□□□□□ -0.61
RPS28-204ENST00000602140 CYLC2Q14093 348 aaPredicted RBP11.21□□□□□ -0.61
RPS28-204ENST00000602140 MOGQ16653 247 aa11.21□□□□□ -0.61
RPS28-204ENST00000602140 TSTQ16762 297 aaKnown RBP11.21□□□□□ -0.61
RPS28-204ENST00000602140 RABL3Q5HYI8 236 aa11.21□□□□□ -0.61
RPS28-204ENST00000602140 C10orf128Q5T292 105 aa11.21□□□□□ -0.61
RPS28-204ENST00000602140 ACSM5Q6NUN0 579 aa11.21□□□□□ -0.61
RPS28-204ENST00000602140 C1orf229Q6ZS94 237 aaPredicted RBP11.21□□□□□ -0.61
RPS28-204ENST00000602140 USP51Q70EK9 711 aa11.21□□□□□ -0.61
RPS28-204ENST00000602140 ZNF418Q8TF45 676 aaPredicted RBP11.21□□□□□ -0.61
RPS28-204ENST00000602140 TMEM239Q8WW34 195 aa11.21□□□□□ -0.61
RPS28-204ENST00000602140 HDAC2Q92769 488 aaKnown RBP11.21□□□□□ -0.61
RPS28-204ENST00000602140 SIAEQ9HAT2 523 aa11.21□□□□□ -0.61
RPS28-204ENST00000602140 CCNB1IP1Q9NPC3 277 aa11.21□□□□□ -0.61
RPS28-204ENST00000602140 G6PC2Q9NQR9 355 aa11.21□□□□□ -0.61
RPS28-204ENST00000602140 BAG5Q9UL15 447 aa11.21□□□□□ -0.61
RPS28-204ENST00000602140 CACNG2Q9Y698 323 aa11.21□□□□□ -0.61
RPS28-204ENST00000602140 TENM1Q9UKZ4 2725 aa11.21□□□□□ -0.62
RPS28-204ENST00000602140 LOC105371242A0A075B767 164 aa11.2□□□□□ -0.62
RPS28-204ENST00000602140 IGKV1D-43A0A0B4J1Z2 117 aa11.2□□□□□ -0.62
RPS28-204ENST00000602140 CLDN25C9JDP6 229 aa11.2□□□□□ -0.62
RPS28-204ENST00000602140 PLPP2O43688 288 aa11.2□□□□□ -0.62
RPS28-204ENST00000602140 EDF1O60869 148 aaKnown RBP11.2□□□□□ -0.62
RPS28-204ENST00000602140 OR5F1O95221 314 aa11.2□□□□□ -0.62
RPS28-204ENST00000602140 AVPP01185 164 aa11.2□□□□□ -0.62
RPS28-204ENST00000602140 IGF2P01344 180 aa11.2□□□□□ -0.62
RPS28-204ENST00000602140 MT-ND5P03915 603 aa11.2□□□□□ -0.62
RPS28-204ENST00000602140 ZNF32P17041 273 aa11.2□□□□□ -0.62
RPS28-204ENST00000602140 CFPP27918 469 aa11.2□□□□□ -0.62
RPS28-204ENST00000602140 OR1E2P47887 323 aa11.2□□□□□ -0.62
RPS28-204ENST00000602140 ZNF81P51508 661 aa11.2□□□□□ -0.62
RPS28-204ENST00000602140 MRPS34P82930 218 aaKnown RBP11.2□□□□□ -0.62
RPS28-204ENST00000602140 FMODQ06828 376 aa11.2□□□□□ -0.62
RPS28-204ENST00000602140 CD47Q08722 323 aa11.2□□□□□ -0.62
RPS28-204ENST00000602140 LAPTM4AQ15012 233 aa11.2□□□□□ -0.62
RPS28-204ENST00000602140 SGCAQ16586 387 aa11.2□□□□□ -0.62
RPS28-204ENST00000602140 HFEQ30201 348 aa11.2□□□□□ -0.62
RPS28-204ENST00000602140 SPATA46Q5T0L3 261 aa11.2□□□□□ -0.62
RPS28-204ENST00000602140 THEM4Q5T1C6 240 aa11.2□□□□□ -0.62
RPS28-204ENST00000602140 ARMC4Q5T2S8 1044 aa11.2□□□□□ -0.62
RPS28-204ENST00000602140 METTL21CQ5VZV1 264 aa11.2□□□□□ -0.62
RPS28-204ENST00000602140 CALHM3Q86XJ0 350 aa11.2□□□□□ -0.62
RPS28-204ENST00000602140 AKR7LQ8NHP1 331 aa11.2□□□□□ -0.62
RPS28-204ENST00000602140 ZFAND2BQ8WV99 257 aa11.2□□□□□ -0.62
RPS28-204ENST00000602140 LIPHQ8WWY8 451 aa11.2□□□□□ -0.62
RPS28-204ENST00000602140 NSMAFQ92636 917 aa11.2□□□□□ -0.62
RPS28-204ENST00000602140 NABP1Q96AH0 204 aa11.2□□□□□ -0.62
RPS28-204ENST00000602140 RAB39BQ96DA2 213 aa11.2□□□□□ -0.62
RPS28-204ENST00000602140 ECSITQ9BQ95 431 aa11.2□□□□□ -0.62
RPS28-204ENST00000602140 SAP30LQ9HAJ7 183 aa11.2□□□□□ -0.62
RPS28-204ENST00000602140 STX18Q9P2W9 335 aaKnown RBP11.2□□□□□ -0.62
RPS28-204ENST00000602140 MED31Q9Y3C7 131 aa11.2□□□□□ -0.62
RPS28-204ENST00000602140 WIPI2Q9Y4P8 454 aa11.2□□□□□ -0.62
RPS28-204ENST00000602140 UGT2A1Q9Y4X1 527 aa11.2□□□□□ -0.62
RPS28-204ENST00000602140 LOC100509620A0A075B734 347 aa11.19□□□□□ -0.62
RPS28-204ENST00000602140 C5orf49A4QMS7 147 aa11.19□□□□□ -0.62
RPS28-204ENST00000602140 HMGB1P1B2RPK0 211 aaPredicted RBP11.19□□□□□ -0.62
RPS28-204ENST00000602140 SPRY3O43610 288 aa11.19□□□□□ -0.62
RPS28-204ENST00000602140 DEAF1O75398 565 aaPredicted RBP11.19□□□□□ -0.62
RPS28-204ENST00000602140 TSPAN19P0C672 248 aa11.19□□□□□ -0.62
RPS28-204ENST00000602140 MAKP20794 623 aa11.19□□□□□ -0.62
RPS28-204ENST00000602140 EPHA1P21709 976 aa11.19□□□□□ -0.62
RPS28-204ENST00000602140 GCH1P30793 250 aa11.19□□□□□ -0.62
RPS28-204ENST00000602140 MPV17P39210 176 aa11.19□□□□□ -0.62
RPS28-204ENST00000602140 WNT5AP41221 380 aa11.19□□□□□ -0.62
RPS28-204ENST00000602140 ERVK-25P63136 954 aa11.19□□□□□ -0.62
RPS28-204ENST00000602140 ACTG1P63261 375 aa11.19□□□□□ -0.62
RPS28-204ENST00000602140 PSG4Q00888 419 aa11.19□□□□□ -0.62
RPS28-204ENST00000602140 ZNF718Q3SXZ3 478 aa11.19□□□□□ -0.62
RPS28-204ENST00000602140 TMEM255AQ5JRV8 349 aa11.19□□□□□ -0.62
RPS28-204ENST00000602140 ZNF101Q8IZC7 436 aa11.19□□□□□ -0.62
RPS28-204ENST00000602140 TEX29Q8N6K0 151 aa11.19□□□□□ -0.62
RPS28-204ENST00000602140 OR8J3Q8NGG0 315 aa11.19□□□□□ -0.62
RPS28-204ENST00000602140 LRRC58Q96CX6 371 aa11.19□□□□□ -0.62
RPS28-204ENST00000602140 NMD3Q96D46 503 aaKnown RBP11.19□□□□□ -0.62
RPS28-204ENST00000602140 ELMOD3Q96FG2 381 aa11.19□□□□□ -0.62
RPS28-204ENST00000602140 MARS2Q96GW9 593 aaKnown RBP11.19□□□□□ -0.62
RPS28-204ENST00000602140 POM121L2Q96KW2 1035 aa11.19□□□□□ -0.62
RPS28-204ENST00000602140 SH3GL1Q99961 368 aa11.19□□□□□ -0.62
RPS28-204ENST00000602140 POLR2J2Q9GZM3 115 aaKnown RBP11.19□□□□□ -0.62
RPS28-204ENST00000602140 POLR2J3Q9H1A7 115 aaKnown RBP11.19□□□□□ -0.62
RPS28-204ENST00000602140 SMURF2Q9HAU4 748 aa11.19□□□□□ -0.62
RPS28-204ENST00000602140 EIF3KQ9UBQ5 218 aaKnown RBP11.19□□□□□ -0.62
RPS28-204ENST00000602140 PCDHB10Q9UN67 800 aa11.19□□□□□ -0.62
RPS28-204ENST00000602140 A0A0G2JMP0 313 aa11.18□□□□□ -0.62
RPS28-204ENST00000602140 A0A0X1KG70 313 aa11.18□□□□□ -0.62
RPS28-204ENST00000602140 PLSCR5A0PG75 271 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms