RNA–Protein interactions for RNA: ENST00000601333.1

ECH1-215, Transcript of enoyl-CoA hydratase 1, human

TSL 2

Gene ECH1, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECH1-215	ENST00000601333	LAP3	P28838	519 aa		12.81	□□□□□ -0.36
ECH1-215	ENST00000601333	EPHA2	P29317	976 aa		12.81	□□□□□ -0.36
ECH1-215	ENST00000601333	NOS3	P29474	1203 aa		12.81	□□□□□ -0.36
ECH1-215	ENST00000601333	HOXC12	P31275	282 aa		12.81	□□□□□ -0.36
ECH1-215	ENST00000601333	PTDSS1	P48651	473 aa	Known RBP	12.81	□□□□□ -0.36
ECH1-215	ENST00000601333	RAP1B	P61224	184 aa		12.81	□□□□□ -0.36
ECH1-215	ENST00000601333	RAP1A	P62834	184 aa		12.81	□□□□□ -0.36
ECH1-215	ENST00000601333	ENDOG	Q14249	297 aa	Known RBP	12.81	□□□□□ -0.36
ECH1-215	ENST00000601333	RAB39A	Q14964	217 aa		12.81	□□□□□ -0.36
ECH1-215	ENST00000601333	MSMP	Q1L6U9	139 aa		12.81	□□□□□ -0.36
ECH1-215	ENST00000601333	GPR139	Q6DWJ6	353 aa		12.81	□□□□□ -0.36
ECH1-215	ENST00000601333	ACSM5	Q6NUN0	579 aa		12.81	□□□□□ -0.36
ECH1-215	ENST00000601333	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	12.81	□□□□□ -0.36
ECH1-215	ENST00000601333	CDH24	Q86UP0	819 aa		12.81	□□□□□ -0.36
ECH1-215	ENST00000601333	OR6V1	Q8N148	313 aa		12.81	□□□□□ -0.36
ECH1-215	ENST00000601333	PAQR4	Q8N4S7	273 aa	Predicted RBP	12.81	□□□□□ -0.36
ECH1-215	ENST00000601333	NPEPL1	Q8NDH3	523 aa		12.81	□□□□□ -0.36
ECH1-215	ENST00000601333	POP5	Q969H6	163 aa	Known RBP	12.81	□□□□□ -0.36
ECH1-215	ENST00000601333	SLC38A2	Q96QD8	506 aa		12.81	□□□□□ -0.36
ECH1-215	ENST00000601333	HCAR1	Q9BXC0	346 aa		12.81	□□□□□ -0.36
ECH1-215	ENST00000601333	ESRP2	Q9H6T0	727 aa	Known RBP	12.81	□□□□□ -0.36
ECH1-215	ENST00000601333	MED20	Q9H944	212 aa		12.81	□□□□□ -0.36
ECH1-215	ENST00000601333	VSX1	Q9NZR4	365 aa	Predicted RBP	12.81	□□□□□ -0.36
ECH1-215	ENST00000601333	USF3	Q68DE3	2245 aa		12.81	□□□□□ -0.36
ECH1-215	ENST00000601333	MYO9A	B2RTY4	2548 aa		12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	IGLV1-36	A0A0B4J1U3	117 aa		12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	CENPBD1	B2RD01	187 aa		12.8	□□□□□ -0.36
ECH1-215	ENST00000601333		M0R129	80 aa		12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	XKRY	O14609	159 aa		12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	ARPC3	O15145	178 aa		12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	DEAF1	O75398	565 aa	Predicted RBP	12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	ATE1	O95260	518 aa		12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	IGKV3-15	P01624	115 aa		12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	SOD3	P08294	240 aa		12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	MMP7	P09237	267 aa	Predicted RBP	12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	ZNF14	P17017	642 aa	Predicted RBP	12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	CD53	P19397	219 aa		12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	FAS	P25445	335 aa		12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	POU1F1	P28069	291 aa		12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	PYCR1	P32322	319 aa		12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	RPS6KA3	P51812	740 aa		12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	RAB1A	P62820	205 aa		12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	NAAA	Q02083	359 aa		12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	HGFAC	Q04756	655 aa		12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	PGGHG	Q32M88	737 aa		12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	THEM4	Q5T1C6	240 aa		12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	FAM205BP	Q63HN1	556 aa		12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	FAHD1	Q6P587	224 aa		12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	PAMR1	Q6UXH9	720 aa		12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	CD300LD	Q6UXZ3	194 aa		12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	FOXL2NB	Q6ZUU3	175 aa		12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	LINC00471	Q8N535	108 aa		12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	OR51L1	Q8NGJ5	315 aa		12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	OR9Q1	Q8NGQ5	310 aa		12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	OR5K1	Q8NHB7	308 aa		12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	AKR7L	Q8NHP1	331 aa		12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	RADIL	Q96JH8	1075 aa		12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	RBP7	Q96R05	134 aa		12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	USB1	Q9BQ65	265 aa	Known RBP	12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	SRA1	Q9HD15	236 aa	Known RBP	12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	RPRD1B	Q9NQG5	326 aa	Known RBP	12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	ST6GALNAC2	Q9UJ37	374 aa		12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	ITGB1BP2	Q9UKP3	347 aa		12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	PRRC2A	P48634	2157 aa	Known RBP	12.8	□□□□□ -0.36
ECH1-215	ENST00000601333	ARRDC5	A6NEK1	342 aa		12.79	□□□□□ -0.36
ECH1-215	ENST00000601333	ERICH4	A6NGS2	130 aa		12.79	□□□□□ -0.36
ECH1-215	ENST00000601333	HS3ST1	O14792	307 aa		12.79	□□□□□ -0.36
ECH1-215	ENST00000601333	WNT11	O96014	354 aa		12.79	□□□□□ -0.36
ECH1-215	ENST00000601333	GYPB	P06028	91 aa		12.79	□□□□□ -0.36
ECH1-215	ENST00000601333	OR8G3P	P0DMU2	310 aa		12.79	□□□□□ -0.36
ECH1-215	ENST00000601333	APEH	P13798	732 aa	Known RBP	12.79	□□□□□ -0.36
ECH1-215	ENST00000601333	ZNF32	P17041	273 aa		12.79	□□□□□ -0.36
ECH1-215	ENST00000601333	POLR2I	P36954	125 aa	Known RBP	12.79	□□□□□ -0.36
ECH1-215	ENST00000601333	ZNF84	P51523	738 aa		12.79	□□□□□ -0.36
ECH1-215	ENST00000601333	NR1H2	P55055	460 aa		12.79	□□□□□ -0.36
ECH1-215	ENST00000601333	CDH11	P55287	796 aa		12.79	□□□□□ -0.36
ECH1-215	ENST00000601333	MRPS34	P82930	218 aa	Known RBP	12.79	□□□□□ -0.36
ECH1-215	ENST00000601333	CRMP1	Q14194	572 aa		12.79	□□□□□ -0.36
ECH1-215	ENST00000601333	ZSCAN26	Q16670	478 aa		12.79	□□□□□ -0.36
ECH1-215	ENST00000601333	GSG1	Q2KHT4	349 aa		12.79	□□□□□ -0.36
ECH1-215	ENST00000601333	ZNF672	Q499Z4	452 aa	Predicted RBP	12.79	□□□□□ -0.36
ECH1-215	ENST00000601333	SLC22A25	Q6T423	547 aa		12.79	□□□□□ -0.36
ECH1-215	ENST00000601333	TMEM108	Q6UXF1	575 aa		12.79	□□□□□ -0.36
ECH1-215	ENST00000601333	HDDC2	Q7Z4H3	204 aa		12.79	□□□□□ -0.36
ECH1-215	ENST00000601333	YTHDF3	Q7Z739	585 aa	Known RBP	12.79	□□□□□ -0.36
ECH1-215	ENST00000601333	ATG16L2	Q8NAA4	619 aa		12.79	□□□□□ -0.36
ECH1-215	ENST00000601333	SLC37A3	Q8NCC5	494 aa		12.79	□□□□□ -0.36
ECH1-215	ENST00000601333	ICA1L	Q8NDH6	482 aa		12.79	□□□□□ -0.36
ECH1-215	ENST00000601333	CPEB3	Q8NE35	698 aa	Known RBP	12.79	□□□□□ -0.36
ECH1-215	ENST00000601333	IGFBPL1	Q8WX77	278 aa		12.79	□□□□□ -0.36
ECH1-215	ENST00000601333	ZNF416	Q9BWM5	594 aa		12.79	□□□□□ -0.36
ECH1-215	ENST00000601333	YY1AP1	Q9H869	796 aa		12.79	□□□□□ -0.36
ECH1-215	ENST00000601333	OBP2B	Q9NPH6	170 aa		12.79	□□□□□ -0.36
ECH1-215	ENST00000601333	POLE4	Q9NR33	117 aa		12.79	□□□□□ -0.36
ECH1-215	ENST00000601333	TMEFF2	Q9UIK5	374 aa	Predicted RBP	12.79	□□□□□ -0.36
ECH1-215	ENST00000601333	OAZ3	Q9UMX2	235 aa		12.79	□□□□□ -0.36
ECH1-215	ENST00000601333	B9D1	Q9UPM9	204 aa		12.79	□□□□□ -0.36
ECH1-215	ENST00000601333	IGHV2OR16-5	A0A0B4J2B6	119 aa		12.78	□□□□□ -0.36
ECH1-215	ENST00000601333	FAM183A	A6NL82	134 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms