RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	RAP1B	P61224	184 aa		13.35	□□□□□ -0.27
PLD3-223	ENST00000600948	RAP1A	P62834	184 aa		13.35	□□□□□ -0.27
PLD3-223	ENST00000600948	ERVK-25	P63136	954 aa		13.35	□□□□□ -0.27
PLD3-223	ENST00000600948	SLC36A2	Q495M3	483 aa		13.35	□□□□□ -0.27
PLD3-223	ENST00000600948	THEM4	Q5T1C6	240 aa		13.35	□□□□□ -0.27
PLD3-223	ENST00000600948	FAM122B	Q7Z309	247 aa		13.35	□□□□□ -0.27
PLD3-223	ENST00000600948	SVOPL	Q8N434	492 aa		13.35	□□□□□ -0.27
PLD3-223	ENST00000600948	LRRC18	Q8N456	261 aa		13.35	□□□□□ -0.27
PLD3-223	ENST00000600948	CCDC197	Q8NCU1	140 aa		13.35	□□□□□ -0.27
PLD3-223	ENST00000600948	OR52J3	Q8NH60	311 aa		13.35	□□□□□ -0.27
PLD3-223	ENST00000600948	FNDC8	Q8TC99	324 aa		13.35	□□□□□ -0.27
PLD3-223	ENST00000600948	C10orf105	Q8TEF2	133 aa		13.35	□□□□□ -0.27
PLD3-223	ENST00000600948	NSMAF	Q92636	917 aa		13.35	□□□□□ -0.27
PLD3-223	ENST00000600948	MRPL24	Q96A35	216 aa	Known RBP	13.35	□□□□□ -0.27
PLD3-223	ENST00000600948	NSL1	Q96IY1	281 aa		13.35	□□□□□ -0.27
PLD3-223	ENST00000600948	RBP7	Q96R05	134 aa		13.35	□□□□□ -0.27
PLD3-223	ENST00000600948	VRK1	Q99986	396 aa	Predicted RBP	13.35	□□□□□ -0.27
PLD3-223	ENST00000600948	RNF121	Q9H920	327 aa		13.35	□□□□□ -0.27
PLD3-223	ENST00000600948	FAM53C	Q9NYF3	392 aa		13.35	□□□□□ -0.27
PLD3-223	ENST00000600948	CMAHP	Q9Y471	501 aa		13.35	□□□□□ -0.27
PLD3-223	ENST00000600948	SPEF1	Q9Y4P9	236 aa		13.35	□□□□□ -0.27
PLD3-223	ENST00000600948	FKBP7	Q9Y680	259 aa		13.35	□□□□□ -0.27
PLD3-223	ENST00000600948	SON	P18583	2426 aa	Known RBP	13.35	□□□□□ -0.27
PLD3-223	ENST00000600948	SH3PXD2B	A1X283	911 aa		13.34	□□□□□ -0.27
PLD3-223	ENST00000600948		B2RBV5	119 aa		13.34	□□□□□ -0.27
PLD3-223	ENST00000600948	PTP4A3	O75365	173 aa		13.34	□□□□□ -0.27
PLD3-223	ENST00000600948	IGFBP1	P08833	259 aa	Predicted RBP	13.34	□□□□□ -0.27
PLD3-223	ENST00000600948	CSF3	P09919	207 aa		13.34	□□□□□ -0.27
PLD3-223	ENST00000600948	GLRX	P35754	106 aa		13.34	□□□□□ -0.27
PLD3-223	ENST00000600948	RPL4	P36578	427 aa	Known RBP	13.34	□□□□□ -0.27
PLD3-223	ENST00000600948	FXYD6P3	P58550	94 aa		13.34	□□□□□ -0.27
PLD3-223	ENST00000600948	THSD4	Q6ZMP0	1018 aa		13.34	□□□□□ -0.27
PLD3-223	ENST00000600948	FOXL2NB	Q6ZUU3	175 aa		13.34	□□□□□ -0.27
PLD3-223	ENST00000600948	PAQR4	Q8N4S7	273 aa	Predicted RBP	13.34	□□□□□ -0.27
PLD3-223	ENST00000600948	SLC30A7	Q8NEW0	376 aa		13.34	□□□□□ -0.27
PLD3-223	ENST00000600948	FAM168A	Q92567	244 aa		13.34	□□□□□ -0.27
PLD3-223	ENST00000600948	RSRC1	Q96IZ7	334 aa	Known RBP	13.34	□□□□□ -0.27
PLD3-223	ENST00000600948		Q96M85	177 aa		13.34	□□□□□ -0.27
PLD3-223	ENST00000600948	GPX7	Q96SL4	187 aa	Predicted RBP	13.34	□□□□□ -0.27
PLD3-223	ENST00000600948	GPA33	Q99795	319 aa		13.34	□□□□□ -0.27
PLD3-223	ENST00000600948	MRPL37	Q9BZE1	423 aa	Known RBP	13.34	□□□□□ -0.27
PLD3-223	ENST00000600948	C1orf198	Q9H425	327 aa		13.34	□□□□□ -0.27
PLD3-223	ENST00000600948	SLC7A8	Q9UHI5	535 aa		13.34	□□□□□ -0.27
PLD3-223	ENST00000600948	FBXO9	Q9UK97	447 aa	Predicted RBP	13.34	□□□□□ -0.27
PLD3-223	ENST00000600948		H7C1C5	153 aa		13.33	□□□□□ -0.28
PLD3-223	ENST00000600948	NDUFB2	O95178	105 aa		13.33	□□□□□ -0.28
PLD3-223	ENST00000600948	GADD45G	O95257	159 aa		13.33	□□□□□ -0.28
PLD3-223	ENST00000600948	T-ENOL	P0DO92	83 aa		13.33	□□□□□ -0.28
PLD3-223	ENST00000600948	CCL2	P13500	99 aa		13.33	□□□□□ -0.28
PLD3-223	ENST00000600948	SLC25A16	P16260	332 aa		13.33	□□□□□ -0.28
PLD3-223	ENST00000600948	ATP6V1B2	P21281	511 aa		13.33	□□□□□ -0.28
PLD3-223	ENST00000600948	EVX1	P49640	407 aa		13.33	□□□□□ -0.28
PLD3-223	ENST00000600948	SMIM11A	P58511	58 aa		13.33	□□□□□ -0.28
PLD3-223	ENST00000600948	LCN6	P62502	163 aa		13.33	□□□□□ -0.28
PLD3-223	ENST00000600948	GALK2	Q01415	458 aa		13.33	□□□□□ -0.28
PLD3-223	ENST00000600948	SPIB	Q01892	262 aa		13.33	□□□□□ -0.28
PLD3-223	ENST00000600948	SGCA	Q16586	387 aa		13.33	□□□□□ -0.28
PLD3-223	ENST00000600948	MEST	Q5EB52	335 aa		13.33	□□□□□ -0.28
PLD3-223	ENST00000600948	FAM27B	Q5VT28	67 aa		13.33	□□□□□ -0.28
PLD3-223	ENST00000600948	MCUR1	Q96AQ8	359 aa		13.33	□□□□□ -0.28
PLD3-223	ENST00000600948	ZNF570	Q96NI8	536 aa		13.33	□□□□□ -0.28
PLD3-223	ENST00000600948	NDEL1	Q9GZM8	345 aa		13.33	□□□□□ -0.28
PLD3-223	ENST00000600948	CDH20	Q9HBT6	801 aa		13.33	□□□□□ -0.28
PLD3-223	ENST00000600948	IL1RAP	Q9NPH3	570 aa		13.33	□□□□□ -0.28
PLD3-223	ENST00000600948	NRIP3	Q9NQ35	241 aa		13.33	□□□□□ -0.28
PLD3-223	ENST00000600948	ACTR3B	Q9P1U1	418 aa		13.33	□□□□□ -0.28
PLD3-223	ENST00000600948	GRHPR	Q9UBQ7	328 aa		13.33	□□□□□ -0.28
PLD3-223	ENST00000600948	AURKC	Q9UQB9	309 aa		13.33	□□□□□ -0.28
PLD3-223	ENST00000600948	IQCM	A0A1B0GVH7	501 aa		13.32	□□□□□ -0.28
PLD3-223	ENST00000600948	SLC22A23	A1A5C7	686 aa		13.32	□□□□□ -0.28
PLD3-223	ENST00000600948	UNC119B	A6NIH7	251 aa		13.32	□□□□□ -0.28
PLD3-223	ENST00000600948	SNAP29	O95721	258 aa		13.32	□□□□□ -0.28
PLD3-223	ENST00000600948	PTH	P01270	115 aa		13.32	□□□□□ -0.28
PLD3-223	ENST00000600948	FABP3	P05413	133 aa		13.32	□□□□□ -0.28
PLD3-223	ENST00000600948	ZNF32	P17041	273 aa		13.32	□□□□□ -0.28
PLD3-223	ENST00000600948	CALB2	P22676	271 aa		13.32	□□□□□ -0.28
PLD3-223	ENST00000600948	PDLIM4	P50479	330 aa		13.32	□□□□□ -0.28
PLD3-223	ENST00000600948	RPS23	P62266	143 aa	Known RBP	13.32	□□□□□ -0.28
PLD3-223	ENST00000600948	PLP2	Q04941	152 aa		13.32	□□□□□ -0.28
PLD3-223	ENST00000600948	TBC1D28	Q2M2D7	210 aa		13.32	□□□□□ -0.28
PLD3-223	ENST00000600948	PABPC1L2A	Q5JQF8	200 aa		13.32	□□□□□ -0.28
PLD3-223	ENST00000600948	CYP2R1	Q6VVX0	501 aa		13.32	□□□□□ -0.28
PLD3-223	ENST00000600948	RINL	Q6ZS11	566 aa		13.32	□□□□□ -0.28
PLD3-223	ENST00000600948	ZER1	Q7Z7L7	766 aa		13.32	□□□□□ -0.28
PLD3-223	ENST00000600948	LRP11	Q86VZ4	500 aa		13.32	□□□□□ -0.28
PLD3-223	ENST00000600948	ZDHHC21	Q8IVQ6	265 aa		13.32	□□□□□ -0.28
PLD3-223	ENST00000600948	ARHGAP24	Q8N264	748 aa		13.32	□□□□□ -0.28
PLD3-223	ENST00000600948	ZCCHC24	Q8N2G6	241 aa	Known RBP	13.32	□□□□□ -0.28
PLD3-223	ENST00000600948	CPEB3	Q8NE35	698 aa	Known RBP	13.32	□□□□□ -0.28
PLD3-223	ENST00000600948	OR1J2	Q8NGS2	313 aa		13.32	□□□□□ -0.28
PLD3-223	ENST00000600948	RASD2	Q96D21	266 aa		13.32	□□□□□ -0.28
PLD3-223	ENST00000600948	RAB1B	Q9H0U4	201 aa		13.32	□□□□□ -0.28
PLD3-223	ENST00000600948	KCNN2	Q9H2S1	579 aa		13.32	□□□□□ -0.28
PLD3-223	ENST00000600948	CCNB1IP1	Q9NPC3	277 aa		13.32	□□□□□ -0.28
PLD3-223	ENST00000600948	KRCC1	Q9NPI7	259 aa	Predicted RBP	13.32	□□□□□ -0.28
PLD3-223	ENST00000600948	TEX13C	A0A0J9YWL9	993 aa		13.31	□□□□□ -0.28
PLD3-223	ENST00000600948		A0A1W2PPL8	197 aa		13.31	□□□□□ -0.28
PLD3-223	ENST00000600948	PRSS37	A4D1T9	235 aa		13.31	□□□□□ -0.28
PLD3-223	ENST00000600948	VWC2L	B2RUY7	222 aa		13.31	□□□□□ -0.28
PLD3-223	ENST00000600948	XKRY	O14609	159 aa		13.31	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms