RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 INSM1Q01101 510 aaPredicted RBP18.24■□□□□ 0.51
SHKBP1-225ENST00000600733 DHODHQ02127 395 aa18.24■□□□□ 0.51
SHKBP1-225ENST00000600733 EBPQ15125 230 aaKnown RBP18.24■□□□□ 0.51
SHKBP1-225ENST00000600733 AANATQ16613 207 aa18.24■□□□□ 0.51
SHKBP1-225ENST00000600733 C2orf76Q3KRA6 126 aa18.24■□□□□ 0.51
SHKBP1-225ENST00000600733 SLC36A1Q7Z2H8 476 aa18.24■□□□□ 0.51
SHKBP1-225ENST00000600733 FAM3DQ96BQ1 224 aa18.24■□□□□ 0.51
SHKBP1-225ENST00000600733 ASXL3Q9C0F0 2248 aa18.23■□□□□ 0.51
SHKBP1-225ENST00000600733 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.23■□□□□ 0.51
SHKBP1-225ENST00000600733 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.23■□□□□ 0.51
SHKBP1-225ENST00000600733 C2CD4DB7Z1M9 353 aa18.23■□□□□ 0.51
SHKBP1-225ENST00000600733 RRASP10301 218 aa18.23■□□□□ 0.51
SHKBP1-225ENST00000600733 GTF2F2P13984 249 aa18.23■□□□□ 0.51
SHKBP1-225ENST00000600733 NFYAP23511 347 aaPredicted RBP18.23■□□□□ 0.51
SHKBP1-225ENST00000600733 H2BFSP57053 126 aa18.23■□□□□ 0.51
SHKBP1-225ENST00000600733 MFGE8Q08431 387 aaPredicted RBP18.23■□□□□ 0.51
SHKBP1-225ENST00000600733 HYAL4Q2M3T9 481 aa18.23■□□□□ 0.51
SHKBP1-225ENST00000600733 VWA2Q5GFL6 755 aa18.23■□□□□ 0.51
SHKBP1-225ENST00000600733 MAMDC2Q7Z304 686 aaPredicted RBP18.23■□□□□ 0.51
SHKBP1-225ENST00000600733 MDGA2Q7Z553 956 aa18.23■□□□□ 0.51
SHKBP1-225ENST00000600733 DVL3Q92997 716 aaPredicted RBP18.23■□□□□ 0.51
SHKBP1-225ENST00000600733 MSANTD3Q96H12 275 aa18.23■□□□□ 0.51
SHKBP1-225ENST00000600733 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.23■□□□□ 0.51
SHKBP1-225ENST00000600733 TBL1XR1Q9BZK7 514 aa18.23■□□□□ 0.51
SHKBP1-225ENST00000600733 MMACHCQ9Y4U1 282 aa18.23■□□□□ 0.51
SHKBP1-225ENST00000600733 NME1P15531 152 aaKnown RBP18.23■□□□□ 0.51
SHKBP1-225ENST00000600733 CTLA4P16410 223 aa18.23■□□□□ 0.51
SHKBP1-225ENST00000600733 RPL27P61353 136 aaKnown RBP18.23■□□□□ 0.51
SHKBP1-225ENST00000600733 OR7E24Q6IFN5 339 aa18.23■□□□□ 0.51
SHKBP1-225ENST00000600733 GKN2Q86XP6 184 aa18.23■□□□□ 0.51
SHKBP1-225ENST00000600733 ZNF679Q8IYX0 411 aa18.23■□□□□ 0.51
SHKBP1-225ENST00000600733 OR51S1Q8NGJ8 323 aa18.23■□□□□ 0.51
SHKBP1-225ENST00000600733 OR8S1Q8NH09 359 aa18.23■□□□□ 0.51
SHKBP1-225ENST00000600733 CSF1P09603 554 aa18.22■□□□□ 0.51
SHKBP1-225ENST00000600733 PLCXD2Q0VAA5 305 aa18.22■□□□□ 0.51
SHKBP1-225ENST00000600733 RAB11BQ15907 218 aa18.22■□□□□ 0.51
SHKBP1-225ENST00000600733 FDX2Q6P4F2 183 aa18.22■□□□□ 0.51
SHKBP1-225ENST00000600733 SLC38A6Q8IZM9 456 aa18.22■□□□□ 0.51
SHKBP1-225ENST00000600733 ZNF519Q8TB69 540 aa18.22■□□□□ 0.51
SHKBP1-225ENST00000600733 HSPB2A8KAH6 182 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 MCRIP1C9JLW8 97 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 H3BMH7 237 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 SUSD5O60279 629 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 CDC40O60508 579 aaKnown RBP eCLIP18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 TSPAN2O60636 221 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 SDC3O75056 442 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 TPPPO94811 219 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 OR6A2O95222 327 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 CD3DP04234 171 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 GP1BBP13224 206 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 ADAM8P78325 824 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 ELAVL1Q15717 326 aaKnown RBP18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 HSPB2Q16082 182 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 SGCBQ16585 318 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 SFRP5Q5T4F7 317 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 HLA-DQA1Q5Y7H0 255 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 SLC18B1Q6NT16 456 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 C3P1Q6ZMU1 363 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 NDUFAF7Q7L592 441 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 SMRP1Q8NCR6 262 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 RNF128Q8TEB7 428 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 GAL3ST1Q99999 423 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 OR11A1Q9GZK7 315 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 UCK1Q9HA47 277 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 ZNF224Q9NZL3 707 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 IGLV1-36A0A0B4J1U3 117 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 TMEM272A0A1B0GTI8 110 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 ALG1L2C9J202 215 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 SLC17A2O00624 439 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 DOK2O60496 412 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 MELKQ14680 651 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 NSDHLQ15738 373 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 TEX30Q5JUR7 227 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 FAM198BQ6UWH4 519 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 KRT77Q7Z794 578 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 ATG5Q9H1Y0 275 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 TAS2R8Q9NYW2 309 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 OPN4Q9UHM6 478 aa18.21■□□□□ 0.51
SHKBP1-225ENST00000600733 TMED7-TICAM2A0A0A6YYA0 188 aa18.2■□□□□ 0.5
SHKBP1-225ENST00000600733 LOC100289279A0A1B0GTE1 492 aa18.2■□□□□ 0.5
SHKBP1-225ENST00000600733 UBE2QL1A1L167 161 aa18.2■□□□□ 0.5
SHKBP1-225ENST00000600733 MPZL1O95297 269 aa18.2■□□□□ 0.5
SHKBP1-225ENST00000600733 PGCP20142 388 aa18.2■□□□□ 0.5
SHKBP1-225ENST00000600733 POU3F2P20265 443 aaPredicted RBP18.2■□□□□ 0.5
SHKBP1-225ENST00000600733 CFPP27918 469 aa18.2■□□□□ 0.5
SHKBP1-225ENST00000600733 CSF2RBP32927 897 aa18.2■□□□□ 0.5
SHKBP1-225ENST00000600733 RAB30Q15771 203 aa18.2■□□□□ 0.5
SHKBP1-225ENST00000600733 NHLRC3Q5JS37 347 aa18.2■□□□□ 0.5
SHKBP1-225ENST00000600733 IDO2Q6ZQW0 420 aa18.2■□□□□ 0.5
SHKBP1-225ENST00000600733 MUC20Q8N307 709 aaPredicted RBP18.2■□□□□ 0.5
SHKBP1-225ENST00000600733 OR1J4Q8NGS1 313 aa18.2■□□□□ 0.5
SHKBP1-225ENST00000600733 OR6N1Q8NGY5 312 aa18.2■□□□□ 0.5
SHKBP1-225ENST00000600733 C8orf44Q96CB5 159 aa18.2■□□□□ 0.5
SHKBP1-225ENST00000600733 OMA1Q96E52 524 aa18.2■□□□□ 0.5
SHKBP1-225ENST00000600733 TMED7Q9Y3B3 224 aa18.2■□□□□ 0.5
SHKBP1-225ENST00000600733 KIF26BQ2KJY2 2108 aa18.2■□□□□ 0.5
SHKBP1-225ENST00000600733 ARPC5O15511 151 aa18.2■□□□□ 0.5
SHKBP1-225ENST00000600733 AKAIN1P0CW23 69 aa18.2■□□□□ 0.5
SHKBP1-225ENST00000600733 ABCD3P28288 659 aa18.2■□□□□ 0.5
SHKBP1-225ENST00000600733 PRSS3P35030 304 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms