RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 SLC7A8Q9UHI5 535 aa13.63□□□□□ -0.23
RPS28-203ENST00000600659 GDF2Q9UK05 429 aaPredicted RBP13.63□□□□□ -0.23
RPS28-203ENST00000600659 POMPQ9Y244 141 aa13.63□□□□□ -0.23
RPS28-203ENST00000600659 TCRBV3S1A0A5B6 114 aa13.62□□□□□ -0.23
RPS28-203ENST00000600659 PRSS37A4D1T9 235 aa13.62□□□□□ -0.23
RPS28-203ENST00000600659 TNFRSF11BO00300 401 aa13.62□□□□□ -0.23
RPS28-203ENST00000600659 DNAJC8O75937 253 aaPredicted RBP13.62□□□□□ -0.23
RPS28-203ENST00000600659 IGHV4-39P01824 125 aa13.62□□□□□ -0.23
RPS28-203ENST00000600659 RAP2AP10114 183 aa13.62□□□□□ -0.23
RPS28-203ENST00000600659 APEHP13798 732 aaKnown RBP13.62□□□□□ -0.23
RPS28-203ENST00000600659 CTLA4P16410 223 aa13.62□□□□□ -0.23
RPS28-203ENST00000600659 APOBEC3AP31941 199 aaPredicted RBP13.62□□□□□ -0.23
RPS28-203ENST00000600659 FABP6P51161 128 aa13.62□□□□□ -0.23
RPS28-203ENST00000600659 ATP5J2P56134 94 aa13.62□□□□□ -0.23
RPS28-203ENST00000600659 CHRNB3Q05901 458 aa13.62□□□□□ -0.23
RPS28-203ENST00000600659 TSPAN31Q12999 210 aa13.62□□□□□ -0.23
RPS28-203ENST00000600659 FAM98BQ52LJ0 330 aaKnown RBP13.62□□□□□ -0.23
RPS28-203ENST00000600659 AGAP6Q5VW22 663 aa13.62□□□□□ -0.23
RPS28-203ENST00000600659 OR2T5Q6IEZ7 315 aa13.62□□□□□ -0.23
RPS28-203ENST00000600659 DPY19L2P2Q6ZN68 376 aa13.62□□□□□ -0.23
RPS28-203ENST00000600659 DNM1P46Q6ZS02 220 aa13.62□□□□□ -0.23
RPS28-203ENST00000600659 PAQR4Q8N4S7 273 aaPredicted RBP13.62□□□□□ -0.23
RPS28-203ENST00000600659 OR2T29Q8NH02 315 aa13.62□□□□□ -0.23
RPS28-203ENST00000600659 FANK1Q8TC84 345 aa13.62□□□□□ -0.23
RPS28-203ENST00000600659 FBXO17Q96EF6 278 aa13.62□□□□□ -0.23
RPS28-203ENST00000600659 CACNG6Q9BXT2 260 aa13.62□□□□□ -0.23
RPS28-203ENST00000600659 ZNF442Q9H7R0 627 aa13.62□□□□□ -0.23
RPS28-203ENST00000600659 SIAEQ9HAT2 523 aa13.62□□□□□ -0.23
RPS28-203ENST00000600659 KRCC1Q9NPI7 259 aaPredicted RBP13.62□□□□□ -0.23
RPS28-203ENST00000600659 VSX1Q9NZR4 365 aaPredicted RBP13.62□□□□□ -0.23
RPS28-203ENST00000600659 GRHPRQ9UBQ7 328 aa13.62□□□□□ -0.23
RPS28-203ENST00000600659 IER3IP1Q9Y5U9 82 aa13.62□□□□□ -0.23
RPS28-203ENST00000600659 ANK3Q12955 4377 aaKnown RBP13.61□□□□□ -0.23
RPS28-203ENST00000600659 GPRIN2O60269 458 aa13.61□□□□□ -0.23
RPS28-203ENST00000600659 FARS2O95363 451 aaKnown RBP13.61□□□□□ -0.23
RPS28-203ENST00000600659 PPP1R3DO95685 299 aa13.61□□□□□ -0.23
RPS28-203ENST00000600659 TP53P04637 393 aaPredicted RBP13.61□□□□□ -0.23
RPS28-203ENST00000600659 SERPINA5P05154 406 aa13.61□□□□□ -0.23
RPS28-203ENST00000600659 IGFBP1P08833 259 aaPredicted RBP13.61□□□□□ -0.23
RPS28-203ENST00000600659 CDKN2AP42771 156 aaKnown RBP13.61□□□□□ -0.23
RPS28-203ENST00000600659 DBPQ10586 325 aaPredicted RBP13.61□□□□□ -0.23
RPS28-203ENST00000600659 ENDOGQ14249 297 aaKnown RBP13.61□□□□□ -0.23
RPS28-203ENST00000600659 RFX4Q33E94 735 aa13.61□□□□□ -0.23
RPS28-203ENST00000600659 FAM27BQ5VT28 67 aa13.61□□□□□ -0.23
RPS28-203ENST00000600659 GPR139Q6DWJ6 353 aa13.61□□□□□ -0.23
RPS28-203ENST00000600659 SLC16A14Q7RTX9 510 aa13.61□□□□□ -0.23
RPS28-203ENST00000600659 FBXL14Q8N1E6 418 aa13.61□□□□□ -0.23
RPS28-203ENST00000600659 CIARTQ8N365 385 aaPredicted RBP13.61□□□□□ -0.23
RPS28-203ENST00000600659 LRRC18Q8N456 261 aa13.61□□□□□ -0.23
RPS28-203ENST00000600659 OR4F15Q8NGB8 312 aa13.61□□□□□ -0.23
RPS28-203ENST00000600659 FNDC8Q8TC99 324 aa13.61□□□□□ -0.23
RPS28-203ENST00000600659 GNPDA2Q8TDQ7 276 aa13.61□□□□□ -0.23
RPS28-203ENST00000600659 Q96MF0 132 aa13.61□□□□□ -0.23
RPS28-203ENST00000600659 RBP7Q96R05 134 aa13.61□□□□□ -0.23
RPS28-203ENST00000600659 CHID1Q9BWS9 393 aa13.61□□□□□ -0.23
RPS28-203ENST00000600659 PLA2G12AQ9BZM1 189 aa13.61□□□□□ -0.23
RPS28-203ENST00000600659 TMCC3Q9ULS5 477 aa13.61□□□□□ -0.23
RPS28-203ENST00000600659 ZFHX3Q15911 3703 aa13.61□□□□□ -0.23
RPS28-203ENST00000600659 ZANQ9Y493 2812 aa13.6□□□□□ -0.23
RPS28-203ENST00000600659 TMEM129A0AVI4 362 aa13.6□□□□□ -0.23
RPS28-203ENST00000600659 DHRS12A0PJE2 317 aa13.6□□□□□ -0.23
RPS28-203ENST00000600659 H7C417 338 aa13.6□□□□□ -0.23
RPS28-203ENST00000600659 DCTN6O00399 190 aa13.6□□□□□ -0.23
RPS28-203ENST00000600659 ARPC3O15145 178 aa13.6□□□□□ -0.23
RPS28-203ENST00000600659 AHCYL1O43865 530 aa13.6□□□□□ -0.23
RPS28-203ENST00000600659 RAB36O95755 333 aa13.6□□□□□ -0.23
RPS28-203ENST00000600659 GASTP01350 101 aa13.6□□□□□ -0.23
RPS28-203ENST00000600659 NR2C1P13056 603 aa13.6□□□□□ -0.23
RPS28-203ENST00000600659 CD99P14209 185 aa13.6□□□□□ -0.23
RPS28-203ENST00000600659 ZNF32P17041 273 aa13.6□□□□□ -0.23
RPS28-203ENST00000600659 NPR2P20594 1047 aa13.6□□□□□ -0.23
RPS28-203ENST00000600659 NR4A1P22736 598 aa13.6□□□□□ -0.23
RPS28-203ENST00000600659 THBS4P35443 961 aa13.6□□□□□ -0.23
RPS28-203ENST00000600659 FLOT2Q14254 428 aa13.6□□□□□ -0.23
RPS28-203ENST00000600659 EFNB3Q15768 340 aa13.6□□□□□ -0.23
RPS28-203ENST00000600659 KRT80Q6KB66 452 aa13.6□□□□□ -0.23
RPS28-203ENST00000600659 UGT2A3Q6UWM9 527 aa13.6□□□□□ -0.23
RPS28-203ENST00000600659 DPPA2Q7Z7J5 298 aa13.6□□□□□ -0.23
RPS28-203ENST00000600659 TMEM179BQ7Z7N9 219 aa13.6□□□□□ -0.23
RPS28-203ENST00000600659 CPEB3Q8NE35 698 aaKnown RBP13.6□□□□□ -0.23
RPS28-203ENST00000600659 IL17RDQ8NFM7 739 aa13.6□□□□□ -0.23
RPS28-203ENST00000600659 OR8D4Q8NGM9 314 aa13.6□□□□□ -0.23
RPS28-203ENST00000600659 POP5Q969H6 163 aaKnown RBP13.6□□□□□ -0.23
RPS28-203ENST00000600659 SLCO4A1Q96BD0 722 aa13.6□□□□□ -0.23
RPS28-203ENST00000600659 SAMD8Q96LT4 415 aa13.6□□□□□ -0.23
RPS28-203ENST00000600659 LRGUKQ96M69 825 aa13.6□□□□□ -0.23
RPS28-203ENST00000600659 KCNS3Q9BQ31 491 aa13.6□□□□□ -0.23
RPS28-203ENST00000600659 SYT4Q9H2B2 425 aa13.6□□□□□ -0.23
RPS28-203ENST00000600659 EGLN3Q9H6Z9 239 aa13.6□□□□□ -0.23
RPS28-203ENST00000600659 POLE4Q9NR33 117 aa13.6□□□□□ -0.23
RPS28-203ENST00000600659 SAMHD1Q9Y3Z3 626 aaKnown RBP13.6□□□□□ -0.23
RPS28-203ENST00000600659 U3KQV3 271 aa13.6□□□□□ -0.23
RPS28-203ENST00000600659 TRIM64A6NGJ6 449 aa13.59□□□□□ -0.23
RPS28-203ENST00000600659 TRIM64BA6NI03 449 aa13.59□□□□□ -0.23
RPS28-203ENST00000600659 SOCS2O14508 198 aa13.59□□□□□ -0.23
RPS28-203ENST00000600659 CCNB2O95067 398 aa13.59□□□□□ -0.23
RPS28-203ENST00000600659 OR4A8P0C604 315 aa13.59□□□□□ -0.23
RPS28-203ENST00000600659 LAP3P28838 519 aa13.59□□□□□ -0.23
RPS28-203ENST00000600659 SLC6A6P31641 620 aa13.59□□□□□ -0.23
RPS28-203ENST00000600659 SNTB2Q13425 540 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms