RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 TLX2O43763 284 aaPredicted RBP17.53■□□□□ 0.4
SHKBP1-222ENST00000600320 SPI1P17947 270 aa17.53■□□□□ 0.4
SHKBP1-222ENST00000600320 CRABP1P29762 137 aa17.53■□□□□ 0.4
SHKBP1-222ENST00000600320 ADARB1P78563 741 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-222ENST00000600320 SORDQ00796 357 aa17.53■□□□□ 0.4
SHKBP1-222ENST00000600320 TGFBR3Q03167 851 aa17.53■□□□□ 0.4
SHKBP1-222ENST00000600320 ANKRD16Q6P6B7 361 aa17.53■□□□□ 0.4
SHKBP1-222ENST00000600320 DNM1P34Q6PK57 102 aa17.53■□□□□ 0.4
SHKBP1-222ENST00000600320 BCDIN3DQ7Z5W3 292 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-222ENST00000600320 BBS1Q8NFJ9 593 aa17.53■□□□□ 0.4
SHKBP1-222ENST00000600320 STEAP2Q8NFT2 490 aa17.53■□□□□ 0.4
SHKBP1-222ENST00000600320 OR51L1Q8NGJ5 315 aa17.53■□□□□ 0.4
SHKBP1-222ENST00000600320 OTULINQ96BN8 352 aa17.53■□□□□ 0.4
SHKBP1-222ENST00000600320 PRRG3Q9BZD7 231 aa17.53■□□□□ 0.4
SHKBP1-222ENST00000600320 RACGAP1Q9H0H5 632 aa17.53■□□□□ 0.4
SHKBP1-222ENST00000600320 VCXQ9H320 206 aa17.53■□□□□ 0.4
SHKBP1-222ENST00000600320 SLC17A5Q9NRA2 495 aa17.53■□□□□ 0.4
SHKBP1-222ENST00000600320 ZNF226Q9NYT6 803 aa17.53■□□□□ 0.4
SHKBP1-222ENST00000600320 PRR23D1E9PI22 279 aaPredicted RBP17.52■□□□□ 0.4
SHKBP1-222ENST00000600320 MPZL1O95297 269 aa17.52■□□□□ 0.4
SHKBP1-222ENST00000600320 CLIC3O95833 236 aa17.52■□□□□ 0.4
SHKBP1-222ENST00000600320 PRR23D2P0DMB1 279 aaPredicted RBP17.52■□□□□ 0.4
SHKBP1-222ENST00000600320 GAAP10253 952 aa17.52■□□□□ 0.4
SHKBP1-222ENST00000600320 IGFBP2P18065 325 aa17.52■□□□□ 0.4
SHKBP1-222ENST00000600320 TUBA1BP68363 451 aa17.52■□□□□ 0.4
SHKBP1-222ENST00000600320 TUBA4AP68366 448 aa17.52■□□□□ 0.4
SHKBP1-222ENST00000600320 MRPS34P82930 218 aaKnown RBP17.52■□□□□ 0.4
SHKBP1-222ENST00000600320 LYPD4Q6UWN0 246 aa17.52■□□□□ 0.4
SHKBP1-222ENST00000600320 TUBA1AQ71U36 451 aa17.52■□□□□ 0.4
SHKBP1-222ENST00000600320 CXXC5Q7LFL8 322 aaKnown RBP17.52■□□□□ 0.4
SHKBP1-222ENST00000600320 DHRSXQ8N5I4 330 aa17.52■□□□□ 0.4
SHKBP1-222ENST00000600320 ZNF555Q8NEP9 628 aa17.52■□□□□ 0.4
SHKBP1-222ENST00000600320 OR2T4Q8NH00 348 aa17.52■□□□□ 0.4
SHKBP1-222ENST00000600320 LINC01560Q8TB33 94 aa17.52■□□□□ 0.4
SHKBP1-222ENST00000600320 TMEM163Q8TC26 289 aa17.52■□□□□ 0.4
SHKBP1-222ENST00000600320 CYGBQ8WWM9 190 aa17.52■□□□□ 0.4
SHKBP1-222ENST00000600320 BOD1Q96IK1 185 aa17.52■□□□□ 0.4
SHKBP1-222ENST00000600320 WFIKKN1Q96NZ8 548 aa17.52■□□□□ 0.4
SHKBP1-222ENST00000600320 ADI1Q9BV57 179 aa17.52■□□□□ 0.4
SHKBP1-222ENST00000600320 OR10A4Q9H209 315 aa17.52■□□□□ 0.4
SHKBP1-222ENST00000600320 OR51V1Q9H2C8 321 aa17.52■□□□□ 0.4
SHKBP1-222ENST00000600320 SEC61A2Q9H9S3 476 aa17.52■□□□□ 0.4
SHKBP1-222ENST00000600320 POLE4Q9NR33 117 aa17.52■□□□□ 0.4
SHKBP1-222ENST00000600320 AASSQ9UDR5 926 aa17.52■□□□□ 0.4
SHKBP1-222ENST00000600320 ZNF503-AS2A6NEH8 195 aa17.51■□□□□ 0.39
SHKBP1-222ENST00000600320 OR5H1A6NKK0 313 aa17.51■□□□□ 0.39
SHKBP1-222ENST00000600320 THBDP07204 575 aa17.51■□□□□ 0.39
SHKBP1-222ENST00000600320 LAP3P28838 519 aa17.51■□□□□ 0.39
SHKBP1-222ENST00000600320 CENPAP49450 140 aa17.51■□□□□ 0.39
SHKBP1-222ENST00000600320 KEAP1Q14145 624 aa17.51■□□□□ 0.39
SHKBP1-222ENST00000600320 SGCAQ16586 387 aa17.51■□□□□ 0.39
SHKBP1-222ENST00000600320 LINC01590Q5TEZ4 76 aa17.51■□□□□ 0.39
SHKBP1-222ENST00000600320 OR7E24Q6IFN5 339 aa17.51■□□□□ 0.39
SHKBP1-222ENST00000600320 UGT2A3Q6UWM9 527 aa17.51■□□□□ 0.39
SHKBP1-222ENST00000600320 IZUMO2Q6UXV1 221 aa17.51■□□□□ 0.39
SHKBP1-222ENST00000600320 SKA3Q8IX90 412 aa17.51■□□□□ 0.39
SHKBP1-222ENST00000600320 SLC22A24Q8N4F4 322 aa17.51■□□□□ 0.39
SHKBP1-222ENST00000600320 OR52N5Q8NH56 324 aa17.51■□□□□ 0.39
SHKBP1-222ENST00000600320 FGFBP3Q8TAT2 258 aa17.51■□□□□ 0.39
SHKBP1-222ENST00000600320 C11orf40Q8WZ69 217 aa17.51■□□□□ 0.39
SHKBP1-222ENST00000600320 SH3GL3Q99963 347 aa17.51■□□□□ 0.39
SHKBP1-222ENST00000600320 VCX3BQ9H321 246 aa17.51■□□□□ 0.39
SHKBP1-222ENST00000600320 EMC7Q9NPA0 242 aa17.51■□□□□ 0.39
SHKBP1-222ENST00000600320 ZNF224Q9NZL3 707 aa17.51■□□□□ 0.39
SHKBP1-222ENST00000600320 CCDC182A6NF36 153 aa17.5■□□□□ 0.39
SHKBP1-222ENST00000600320 H0YJX3 145 aa17.5■□□□□ 0.39
SHKBP1-222ENST00000600320 PAICSP22234 425 aaKnown RBP17.5■□□□□ 0.39
SHKBP1-222ENST00000600320 SLC2A5P22732 501 aa17.5■□□□□ 0.39
SHKBP1-222ENST00000600320 VHLP40337 213 aa17.5■□□□□ 0.39
SHKBP1-222ENST00000600320 CDC42P60953 191 aa17.5■□□□□ 0.39
SHKBP1-222ENST00000600320 TAB1Q15750 504 aa17.5■□□□□ 0.39
SHKBP1-222ENST00000600320 MEP1BQ16820 701 aa17.5■□□□□ 0.39
SHKBP1-222ENST00000600320 TIMM23BQ5SRD1 257 aa17.5■□□□□ 0.39
SHKBP1-222ENST00000600320 AADACL4Q5VUY2 407 aa17.5■□□□□ 0.39
SHKBP1-222ENST00000600320 GLB1L2Q8IW92 636 aa17.5■□□□□ 0.39
SHKBP1-222ENST00000600320 C17orf78Q8N4C9 275 aa17.5■□□□□ 0.39
SHKBP1-222ENST00000600320 ACBD4Q8NC06 268 aa17.5■□□□□ 0.39
SHKBP1-222ENST00000600320 PROKR2Q8NFJ6 384 aa17.5■□□□□ 0.39
SHKBP1-222ENST00000600320 SLC26A10Q8NG04 563 aa17.5■□□□□ 0.39
SHKBP1-222ENST00000600320 ZC3HAV1LQ96H79 300 aaKnown RBP17.5■□□□□ 0.39
SHKBP1-222ENST00000600320 NOX3Q9HBY0 568 aa17.5■□□□□ 0.39
SHKBP1-222ENST00000600320 MRPL22Q9NWU5 206 aaKnown RBP17.5■□□□□ 0.39
SHKBP1-222ENST00000600320 IMPAD1Q9NX62 359 aa17.5■□□□□ 0.39
SHKBP1-222ENST00000600320 SLC25A15Q9Y619 301 aa17.5■□□□□ 0.39
SHKBP1-222ENST00000600320 FLNCQ14315 2725 aa17.49■□□□□ 0.39
SHKBP1-222ENST00000600320 PRR14LQ5THK1 2151 aa17.49■□□□□ 0.39
SHKBP1-222ENST00000600320 SH3D21A4FU49 640 aa17.49■□□□□ 0.39
SHKBP1-222ENST00000600320 TVP23AA6NH52 213 aa17.49■□□□□ 0.39
SHKBP1-222ENST00000600320 TFP02787 698 aa17.49■□□□□ 0.39
SHKBP1-222ENST00000600320 PATE4P0C8F1 98 aa17.49■□□□□ 0.39
SHKBP1-222ENST00000600320 OR8G3PP0DMU2 310 aa17.49■□□□□ 0.39
SHKBP1-222ENST00000600320 GABRB1P18505 474 aa17.49■□□□□ 0.39
SHKBP1-222ENST00000600320 NPR2P20594 1047 aa17.49■□□□□ 0.39
SHKBP1-222ENST00000600320 MSR1P21757 451 aa17.49■□□□□ 0.39
SHKBP1-222ENST00000600320 CAPGP40121 348 aa17.49■□□□□ 0.39
SHKBP1-222ENST00000600320 ENDOGQ14249 297 aaKnown RBP17.49■□□□□ 0.39
SHKBP1-222ENST00000600320 NRN1LQ496H8 165 aa17.49■□□□□ 0.39
SHKBP1-222ENST00000600320 KLHL12Q53G59 568 aa17.49■□□□□ 0.39
SHKBP1-222ENST00000600320 TTC23Q5W5X9 447 aa17.49■□□□□ 0.39
SHKBP1-222ENST00000600320 SEZ6L2Q6UXD5 910 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms