RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 CXCR6O00574 342 aa13.55□□□□□ -0.24
VRK3-221ENST00000600284 SRD5A1P18405 259 aa13.55□□□□□ -0.24
VRK3-221ENST00000600284 APLNRP35414 380 aa13.55□□□□□ -0.24
VRK3-221ENST00000600284 SLC9A3P48764 834 aa13.55□□□□□ -0.24
VRK3-221ENST00000600284 SEC24CP53992 1094 aa13.55□□□□□ -0.24
VRK3-221ENST00000600284 TMEM33P57088 247 aa13.55□□□□□ -0.24
VRK3-221ENST00000600284 KLF3P57682 345 aaPredicted RBP13.55□□□□□ -0.24
VRK3-221ENST00000600284 HSF2Q03933 536 aa13.55□□□□□ -0.24
VRK3-221ENST00000600284 PRKCDQ05655 676 aa13.55□□□□□ -0.24
VRK3-221ENST00000600284 CD47Q08722 323 aa13.55□□□□□ -0.24
VRK3-221ENST00000600284 FAM27BQ5VT28 67 aa13.55□□□□□ -0.24
VRK3-221ENST00000600284 C8orf82Q6P1X6 216 aaPredicted RBP13.55□□□□□ -0.24
VRK3-221ENST00000600284 SLC25A47Q6Q0C1 308 aa13.55□□□□□ -0.24
VRK3-221ENST00000600284 UNQ6126/PRO20091Q6UXV3 157 aa13.55□□□□□ -0.24
VRK3-221ENST00000600284 VTCN1Q7Z7D3 282 aa13.55□□□□□ -0.24
VRK3-221ENST00000600284 C1orf174Q8IYL3 243 aa13.55□□□□□ -0.24
VRK3-221ENST00000600284 LRRC18Q8N456 261 aa13.55□□□□□ -0.24
VRK3-221ENST00000600284 PAQR4Q8N4S7 273 aaPredicted RBP13.55□□□□□ -0.24
VRK3-221ENST00000600284 LINC01356Q8N9X3 169 aa13.55□□□□□ -0.24
VRK3-221ENST00000600284 SYNPRQ8TBG9 265 aa13.55□□□□□ -0.24
VRK3-221ENST00000600284 NABP1Q96AH0 204 aa13.55□□□□□ -0.24
VRK3-221ENST00000600284 CCNB1IP1Q9NPC3 277 aa13.55□□□□□ -0.24
VRK3-221ENST00000600284 MAN2C1Q9NTJ4 1040 aa13.55□□□□□ -0.24
VRK3-221ENST00000600284 MYEF2Q9P2K5 600 aaKnown RBP13.55□□□□□ -0.24
VRK3-221ENST00000600284 UGT2A1Q9Y4X1 527 aa13.55□□□□□ -0.24
VRK3-221ENST00000600284 MALRD1Q5VYJ5 2156 aa13.55□□□□□ -0.24
VRK3-221ENST00000600284 A0A1W2PPW3 197 aa13.54□□□□□ -0.24
VRK3-221ENST00000600284 A6NIZ1 184 aa13.54□□□□□ -0.24
VRK3-221ENST00000600284 LYNX1G3V0Z9 82 aa13.54□□□□□ -0.24
VRK3-221ENST00000600284 FFAR1O14842 300 aa13.54□□□□□ -0.24
VRK3-221ENST00000600284 GSTA4O15217 222 aa13.54□□□□□ -0.24
VRK3-221ENST00000600284 PIP5K1CO60331 668 aa13.54□□□□□ -0.24
VRK3-221ENST00000600284 SLC2A10O95528 541 aa13.54□□□□□ -0.24
VRK3-221ENST00000600284 HPXP02790 462 aa13.54□□□□□ -0.24
VRK3-221ENST00000600284 FAM157BP0CG42 384 aa13.54□□□□□ -0.24
VRK3-221ENST00000600284 LYNX1P0DP58 116 aa13.54□□□□□ -0.24
VRK3-221ENST00000600284 SAGP10523 405 aaPredicted RBP13.54□□□□□ -0.24
VRK3-221ENST00000600284 CCL2P13500 99 aa13.54□□□□□ -0.24
VRK3-221ENST00000600284 TCN1P20061 433 aaPredicted RBP13.54□□□□□ -0.24
VRK3-221ENST00000600284 COL8A2P25067 703 aa13.54□□□□□ -0.24
VRK3-221ENST00000600284 APEX1P27695 318 aaKnown RBP13.54□□□□□ -0.24
VRK3-221ENST00000600284 GUCA1AP43080 201 aaPredicted RBP13.54□□□□□ -0.24
VRK3-221ENST00000600284 SLC7A2P52569 658 aa13.54□□□□□ -0.24
VRK3-221ENST00000600284 CTXN1P60606 82 aa13.54□□□□□ -0.24
VRK3-221ENST00000600284 RAP1BP61224 184 aa13.54□□□□□ -0.24
VRK3-221ENST00000600284 RAP1AP62834 184 aa13.54□□□□□ -0.24
VRK3-221ENST00000600284 MAD2L1BPQ15013 274 aaPredicted RBP13.54□□□□□ -0.24
VRK3-221ENST00000600284 NKPD1Q17RQ9 610 aa13.54□□□□□ -0.24
VRK3-221ENST00000600284 IFI44LQ53G44 452 aa13.54□□□□□ -0.24
VRK3-221ENST00000600284 PABPC1L2AQ5JQF8 200 aa13.54□□□□□ -0.24
VRK3-221ENST00000600284 FKBP9P1Q75LS8 142 aa13.54□□□□□ -0.24
VRK3-221ENST00000600284 OAFQ86UD1 273 aa13.54□□□□□ -0.24
VRK3-221ENST00000600284 NRMQ8IXM6 262 aa13.54□□□□□ -0.24
VRK3-221ENST00000600284 LRRC75AQ8NAA5 344 aa13.54□□□□□ -0.24
VRK3-221ENST00000600284 FAM156AQ8NDB6 213 aa13.54□□□□□ -0.24
VRK3-221ENST00000600284 ACOT11Q8WXI4 607 aaPredicted RBP13.54□□□□□ -0.24
VRK3-221ENST00000600284 SNX18Q96RF0 628 aa13.54□□□□□ -0.24
VRK3-221ENST00000600284 SOX7Q9BT81 388 aa13.54□□□□□ -0.24
VRK3-221ENST00000600284 ANKRD19PQ9H560 264 aa13.54□□□□□ -0.24
VRK3-221ENST00000600284 HINT3Q9NQE9 182 aaKnown RBP13.54□□□□□ -0.24
VRK3-221ENST00000600284 NKIRAS2Q9NYR9 191 aa13.54□□□□□ -0.24
VRK3-221ENST00000600284 TAAR3PQ9P1P4 343 aa13.54□□□□□ -0.24
VRK3-221ENST00000600284 FZR1Q9UM11 496 aa13.54□□□□□ -0.24
VRK3-221ENST00000600284 SNX13Q9Y5W8 968 aa13.54□□□□□ -0.24
VRK3-221ENST00000600284 SVEP1Q4LDE5 3571 aa13.53□□□□□ -0.24
VRK3-221ENST00000600284 IGKV1D-43A0A0B4J1Z2 117 aa13.53□□□□□ -0.24
VRK3-221ENST00000600284 C17orf100A8MU93 164 aa13.53□□□□□ -0.24
VRK3-221ENST00000600284 EFCAB9A8MZ26 197 aa13.53□□□□□ -0.24
VRK3-221ENST00000600284 NME4O00746 187 aa13.53□□□□□ -0.24
VRK3-221ENST00000600284 PHF1O43189 567 aaPredicted RBP13.53□□□□□ -0.24
VRK3-221ENST00000600284 ZNF682O95780 498 aa13.53□□□□□ -0.24
VRK3-221ENST00000600284 LCKP06239 509 aa13.53□□□□□ -0.24
VRK3-221ENST00000600284 NAT2P11245 290 aa13.53□□□□□ -0.24
VRK3-221ENST00000600284 MAKP20794 623 aa13.53□□□□□ -0.24
VRK3-221ENST00000600284 STOMP27105 288 aa13.53□□□□□ -0.24
VRK3-221ENST00000600284 CDAP32320 146 aa13.53□□□□□ -0.24
VRK3-221ENST00000600284 GPR6P46095 362 aaPredicted RBP13.53□□□□□ -0.24
VRK3-221ENST00000600284 YAP1P46937 504 aaKnown RBP13.53□□□□□ -0.24
VRK3-221ENST00000600284 CDH15P55291 814 aa13.53□□□□□ -0.24
VRK3-221ENST00000600284 SGCAQ16586 387 aa13.53□□□□□ -0.24
VRK3-221ENST00000600284 PCGF3Q3KNV8 242 aa13.53□□□□□ -0.24
VRK3-221ENST00000600284 TMEM154Q6P9G4 183 aa13.53□□□□□ -0.24
VRK3-221ENST00000600284 MBOAT2Q6ZWT7 520 aa13.53□□□□□ -0.24
VRK3-221ENST00000600284 ALDH16A1Q8IZ83 802 aa13.53□□□□□ -0.24
VRK3-221ENST00000600284 CPEB3Q8NE35 698 aaKnown RBP13.53□□□□□ -0.24
VRK3-221ENST00000600284 SNX33Q8WV41 574 aa13.53□□□□□ -0.24
VRK3-221ENST00000600284 NSMAFQ92636 917 aa13.53□□□□□ -0.24
VRK3-221ENST00000600284 CMTM5Q96DZ9 223 aa13.53□□□□□ -0.24
VRK3-221ENST00000600284 POM121L2Q96KW2 1035 aa13.53□□□□□ -0.24
VRK3-221ENST00000600284 WACQ9BTA9 647 aa13.53□□□□□ -0.24
VRK3-221ENST00000600284 ZNF416Q9BWM5 594 aa13.53□□□□□ -0.24
VRK3-221ENST00000600284 EIF3KQ9UBQ5 218 aaKnown RBP13.53□□□□□ -0.24
VRK3-221ENST00000600284 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.53□□□□□ -0.242e-9■■■■□ 22.3
VRK3-221ENST00000600284 MXRA5Q9NR99 2828 aa13.52□□□□□ -0.24
VRK3-221ENST00000600284 A0A087WUU8 490 aa13.52□□□□□ -0.25
VRK3-221ENST00000600284 J3KTA2 159 aa13.52□□□□□ -0.25
VRK3-221ENST00000600284 AHCYL1O43865 530 aa13.52□□□□□ -0.25
VRK3-221ENST00000600284 PRSS23O95084 383 aa13.52□□□□□ -0.25
VRK3-221ENST00000600284 CLPTM1O96005 669 aa13.52□□□□□ -0.25
VRK3-221ENST00000600284 SERPINA1P01009 418 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms