RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 KLHL21Q9UJP4 597 aa16.52■□□□□ 0.24
CCDC9-205ENST00000600117 ZNF99A8MXY4 864 aaPredicted RBP16.51■□□□□ 0.23
CCDC9-205ENST00000600117 DCTN6O00399 190 aa16.51■□□□□ 0.23
CCDC9-205ENST00000600117 SURF4O15260 269 aa16.51■□□□□ 0.23
CCDC9-205ENST00000600117 RAD51DO75771 328 aa16.51■□□□□ 0.23
CCDC9-205ENST00000600117 CTLA4P16410 223 aa16.51■□□□□ 0.23
CCDC9-205ENST00000600117 IL32P24001 234 aa16.51■□□□□ 0.23
CCDC9-205ENST00000600117 DBPQ10586 325 aaPredicted RBP16.51■□□□□ 0.23
CCDC9-205ENST00000600117 CRMP1Q14194 572 aa16.51■□□□□ 0.23
CCDC9-205ENST00000600117 C12orf73Q69YU5 71 aa16.51■□□□□ 0.23
CCDC9-205ENST00000600117 C22orf34Q6ZV56 151 aa16.51■□□□□ 0.23
CCDC9-205ENST00000600117 GALNT4Q8N4A0 578 aa16.51■□□□□ 0.23
CCDC9-205ENST00000600117 CYB561A3Q8NBI2 242 aa16.51■□□□□ 0.23
CCDC9-205ENST00000600117 C1orf162Q8NEQ5 155 aaPredicted RBP16.51■□□□□ 0.23
CCDC9-205ENST00000600117 STEAP2Q8NFT2 490 aa16.51■□□□□ 0.23
CCDC9-205ENST00000600117 BCL2L2Q92843 193 aaPredicted RBP16.51■□□□□ 0.23
CCDC9-205ENST00000600117 TSSK2Q96PF2 358 aa16.51■□□□□ 0.23
CCDC9-205ENST00000600117 GRIP2Q9C0E4 1043 aa16.51■□□□□ 0.23
CCDC9-205ENST00000600117 NUAK2Q9H093 628 aa16.51■□□□□ 0.23
CCDC9-205ENST00000600117 TOR3AQ9H497 397 aa16.51■□□□□ 0.23
CCDC9-205ENST00000600117 ORC6Q9Y5N6 252 aa16.51■□□□□ 0.23
CCDC9-205ENST00000600117 CIB4A0PJX0 185 aa16.5■□□□□ 0.23
CCDC9-205ENST00000600117 SEC14L2O76054 403 aa16.5■□□□□ 0.23
CCDC9-205ENST00000600117 SNAP29O95721 258 aa16.5■□□□□ 0.23
CCDC9-205ENST00000600117 RENP00797 406 aa16.5■□□□□ 0.23
CCDC9-205ENST00000600117 HMGN1P05114 100 aa16.5■□□□□ 0.23
CCDC9-205ENST00000600117 CDH2P19022 906 aaPredicted RBP16.5■□□□□ 0.23
CCDC9-205ENST00000600117 TGFBR3Q03167 851 aa16.5■□□□□ 0.23
CCDC9-205ENST00000600117 SNTB1Q13884 538 aaKnown RBP16.5■□□□□ 0.23
CCDC9-205ENST00000600117 ETFDHQ16134 617 aa16.5■□□□□ 0.23
CCDC9-205ENST00000600117 FOXL2NBQ6ZUU3 175 aa16.5■□□□□ 0.23
CCDC9-205ENST00000600117 TMEM200AQ86VY9 491 aa16.5■□□□□ 0.23
CCDC9-205ENST00000600117 NSMAFQ92636 917 aa16.5■□□□□ 0.23
CCDC9-205ENST00000600117 S100PBPQ96BU1 408 aa16.5■□□□□ 0.23
CCDC9-205ENST00000600117 FOXB1Q99853 325 aa16.5■□□□□ 0.23
CCDC9-205ENST00000600117 NMNAT2Q9BZQ4 307 aa16.5■□□□□ 0.23
CCDC9-205ENST00000600117 ACTR6Q9GZN1 396 aa16.5■□□□□ 0.23
CCDC9-205ENST00000600117 FN3KQ9H479 309 aa16.5■□□□□ 0.23
CCDC9-205ENST00000600117 TMEM38BQ9NVV0 291 aa16.5■□□□□ 0.23
CCDC9-205ENST00000600117 COL6A5A8TX70 2615 aa16.5■□□□□ 0.23
CCDC9-205ENST00000600117 IGLV1-36A0A0B4J1U3 117 aa16.49■□□□□ 0.23
CCDC9-205ENST00000600117 RIIAD1A6NNX1 92 aa16.49■□□□□ 0.23
CCDC9-205ENST00000600117 SLC16A7O60669 478 aa16.49■□□□□ 0.23
CCDC9-205ENST00000600117 IFNGP01579 166 aa16.49■□□□□ 0.23
CCDC9-205ENST00000600117 EFNB1P98172 346 aa16.49■□□□□ 0.23
CCDC9-205ENST00000600117 OR7E24Q6IFN5 339 aa16.49■□□□□ 0.23
CCDC9-205ENST00000600117 ANKRD16Q6P6B7 361 aa16.49■□□□□ 0.23
CCDC9-205ENST00000600117 ZBTB46Q86UZ6 589 aa16.49■□□□□ 0.23
CCDC9-205ENST00000600117 OR6V1Q8N148 313 aa16.49■□□□□ 0.23
CCDC9-205ENST00000600117 NINJ1Q92982 152 aa16.49■□□□□ 0.23
CCDC9-205ENST00000600117 RDH12Q96NR8 316 aa16.49■□□□□ 0.23
CCDC9-205ENST00000600117 RPRD1BQ9NQG5 326 aaKnown RBP16.49■□□□□ 0.23
CCDC9-205ENST00000600117 SLC17A5Q9NRA2 495 aa16.49■□□□□ 0.23
CCDC9-205ENST00000600117 SMPD3Q9NY59 655 aaPredicted RBP16.49■□□□□ 0.23
CCDC9-205ENST00000600117 KCNN3Q9UGI6 736 aa16.49■□□□□ 0.23
CCDC9-205ENST00000600117 B9D1Q9UPM9 204 aa16.49■□□□□ 0.23
CCDC9-205ENST00000600117 FKBP7Q9Y680 259 aa16.49■□□□□ 0.23
CCDC9-205ENST00000600117 OR5H1A6NKK0 313 aa16.48■□□□□ 0.23
CCDC9-205ENST00000600117 KHDRBS3O75525 346 aaKnown RBP16.48■□□□□ 0.23
CCDC9-205ENST00000600117 THBDP07204 575 aa16.48■□□□□ 0.23
CCDC9-205ENST00000600117 B4GALT1P15291 398 aa16.48■□□□□ 0.23
CCDC9-205ENST00000600117 FOSL1P15407 271 aa16.48■□□□□ 0.23
CCDC9-205ENST00000600117 ZNF3P17036 446 aa16.48■□□□□ 0.23
CCDC9-205ENST00000600117 CDAP32320 146 aa16.48■□□□□ 0.23
CCDC9-205ENST00000600117 ZNF84P51523 738 aa16.48■□□□□ 0.23
CCDC9-205ENST00000600117 SLC25A1P53007 311 aa16.48■□□□□ 0.23
CCDC9-205ENST00000600117 MRPS34P82930 218 aaKnown RBP16.48■□□□□ 0.23
CCDC9-205ENST00000600117 TBRG1Q3YBR2 411 aa16.48■□□□□ 0.23
CCDC9-205ENST00000600117 HIKESHIQ53FT3 197 aa16.48■□□□□ 0.23
CCDC9-205ENST00000600117 KLHL24Q6TFL4 600 aa16.48■□□□□ 0.23
CCDC9-205ENST00000600117 DMRTC2Q8IXT2 367 aaPredicted RBP16.48■□□□□ 0.23
CCDC9-205ENST00000600117 C17orf78Q8N4C9 275 aa16.48■□□□□ 0.23
CCDC9-205ENST00000600117 WDR31Q8NA23 367 aa16.48■□□□□ 0.23
CCDC9-205ENST00000600117 OR9Q1Q8NGQ5 310 aa16.48■□□□□ 0.23
CCDC9-205ENST00000600117 LINC01560Q8TB33 94 aa16.48■□□□□ 0.23
CCDC9-205ENST00000600117 NRGNQ92686 78 aa16.48■□□□□ 0.23
CCDC9-205ENST00000600117 HTRA1Q92743 480 aa16.48■□□□□ 0.23
CCDC9-205ENST00000600117 NABP1Q96AH0 204 aa16.48■□□□□ 0.23
CCDC9-205ENST00000600117 HRASLS5Q96KN8 279 aa16.48■□□□□ 0.23
CCDC9-205ENST00000600117 WFIKKN1Q96NZ8 548 aa16.48■□□□□ 0.23
CCDC9-205ENST00000600117 PITX2Q99697 317 aa16.48■□□□□ 0.23
CCDC9-205ENST00000600117 USB1Q9BQ65 265 aaKnown RBP16.48■□□□□ 0.23
CCDC9-205ENST00000600117 HCAR1Q9BXC0 346 aa16.48■□□□□ 0.23
CCDC9-205ENST00000600117 RACGAP1Q9H0H5 632 aa16.48■□□□□ 0.23
CCDC9-205ENST00000600117 GSX1Q9H4S2 264 aaPredicted RBP16.48■□□□□ 0.23
CCDC9-205ENST00000600117 TVP23BQ9NYZ1 205 aa16.48■□□□□ 0.23
CCDC9-205ENST00000600117 CSPG4Q6UVK1 2322 aa16.48■□□□□ 0.23
CCDC9-205ENST00000600117 PRR14LQ5THK1 2151 aa16.48■□□□□ 0.23
CCDC9-205ENST00000600117 STAB1Q9NY15 2570 aa16.47■□□□□ 0.23
CCDC9-205ENST00000600117 A0A096LPE4 126 aa16.47■□□□□ 0.23
CCDC9-205ENST00000600117 A0A1W2PPZ6 126 aa16.47■□□□□ 0.23
CCDC9-205ENST00000600117 FAM183AA6NL82 134 aa16.47■□□□□ 0.23
CCDC9-205ENST00000600117 M0R129 80 aa16.47■□□□□ 0.23
CCDC9-205ENST00000600117 PRKYO43930 277 aa16.47■□□□□ 0.23
CCDC9-205ENST00000600117 PPP3CBP16298 524 aa16.47■□□□□ 0.23
CCDC9-205ENST00000600117 CRABP1P29762 137 aa16.47■□□□□ 0.23
CCDC9-205ENST00000600117 GGT2P36268 569 aa16.47■□□□□ 0.23
CCDC9-205ENST00000600117 TAB1Q15750 504 aa16.47■□□□□ 0.23
CCDC9-205ENST00000600117 SNAPC1Q16533 368 aa16.47■□□□□ 0.23
CCDC9-205ENST00000600117 TIMM23BQ5SRD1 257 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms