RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 SPATS1Q496A3 300 aa16.12■□□□□ 0.17
PNKP-213ENST00000599543 FGD3Q5JSP0 725 aa16.12■□□□□ 0.17
PNKP-213ENST00000599543 NANOGNBQ7Z5D8 188 aa16.12■□□□□ 0.17
PNKP-213ENST00000599543 CYP4Z1Q86W10 505 aa16.12■□□□□ 0.17
PNKP-213ENST00000599543 ARHGAP24Q8N264 748 aa16.12■□□□□ 0.17
PNKP-213ENST00000599543 SLC22A24Q8N4F4 322 aa16.12■□□□□ 0.17
PNKP-213ENST00000599543 OR52J3Q8NH60 311 aa16.12■□□□□ 0.17
PNKP-213ENST00000599543 HPS1Q92902 700 aa16.12■□□□□ 0.17
PNKP-213ENST00000599543 SGTBQ96EQ0 304 aa16.12■□□□□ 0.17
PNKP-213ENST00000599543 SLC25A44Q96H78 314 aaPredicted RBP16.12■□□□□ 0.17
PNKP-213ENST00000599543 SOX7Q9BT81 388 aa16.12■□□□□ 0.17
PNKP-213ENST00000599543 CADM1Q9BY67 442 aaKnown RBP16.12■□□□□ 0.17
PNKP-213ENST00000599543 MS4A5Q9H3V2 200 aa16.12■□□□□ 0.17
PNKP-213ENST00000599543 NMNAT1Q9HAN9 279 aaPredicted RBP16.12■□□□□ 0.17
PNKP-213ENST00000599543 REV1Q9UBZ9 1251 aa16.12■□□□□ 0.17
PNKP-213ENST00000599543 SLC7A8Q9UHI5 535 aa16.12■□□□□ 0.17
PNKP-213ENST00000599543 MED31Q9Y3C7 131 aa16.12■□□□□ 0.17
PNKP-213ENST00000599543 FAM32AQ9Y421 112 aaKnown RBP16.12■□□□□ 0.17
PNKP-213ENST00000599543 OR7A10O76100 309 aa16.11■□□□□ 0.17
PNKP-213ENST00000599543 FARS2O95363 451 aaKnown RBP16.11■□□□□ 0.17
PNKP-213ENST00000599543 IGFBP1P08833 259 aaPredicted RBP16.11■□□□□ 0.17
PNKP-213ENST00000599543 ASAH2BP0C7U1 165 aa16.11■□□□□ 0.17
PNKP-213ENST00000599543 IFI30P13284 250 aa16.11■□□□□ 0.17
PNKP-213ENST00000599543 RBM34P42696 430 aaKnown RBP16.11■□□□□ 0.17
PNKP-213ENST00000599543 RIN1Q13671 783 aa16.11■□□□□ 0.17
PNKP-213ENST00000599543 MSMPQ1L6U9 139 aa16.11■□□□□ 0.17
PNKP-213ENST00000599543 DNAL1Q4LDG9 190 aa16.11■□□□□ 0.17
PNKP-213ENST00000599543 LCN8Q6JVE9 175 aa16.11■□□□□ 0.17
PNKP-213ENST00000599543 SKA3Q8IX90 412 aa16.11■□□□□ 0.17
PNKP-213ENST00000599543 NRMQ8IXM6 262 aa16.11■□□□□ 0.17
PNKP-213ENST00000599543 TMEM38BQ9NVV0 291 aa16.11■□□□□ 0.17
PNKP-213ENST00000599543 A0A087WUU8 490 aa16.1■□□□□ 0.17
PNKP-213ENST00000599543 LYNX1G3V0Z9 82 aa16.1■□□□□ 0.17
PNKP-213ENST00000599543 BLOC1S5-TXNDC5H3BN57 136 aa16.1■□□□□ 0.17
PNKP-213ENST00000599543 ACOT8O14734 319 aa16.1■□□□□ 0.17
PNKP-213ENST00000599543 GSC2O15499 205 aa16.1■□□□□ 0.17
PNKP-213ENST00000599543 LILRA1O75019 489 aa16.1■□□□□ 0.17
PNKP-213ENST00000599543 DNAJC8O75937 253 aaPredicted RBP16.1■□□□□ 0.17
PNKP-213ENST00000599543 BCL10O95999 233 aa16.1■□□□□ 0.17
PNKP-213ENST00000599543 IGHG1P01857 330 aa16.1■□□□□ 0.17
PNKP-213ENST00000599543 SERPINA5P05154 406 aa16.1■□□□□ 0.17
PNKP-213ENST00000599543 H1F0P07305 194 aaKnown RBP16.1■□□□□ 0.17
PNKP-213ENST00000599543 PATE4P0C8F1 98 aa16.1■□□□□ 0.17
PNKP-213ENST00000599543 PGA4P0DJD7 388 aa16.1■□□□□ 0.17
PNKP-213ENST00000599543 PGA3P0DJD8 388 aa16.1■□□□□ 0.17
PNKP-213ENST00000599543 LYNX1P0DP58 116 aa16.1■□□□□ 0.17
PNKP-213ENST00000599543 THRBP10828 461 aa16.1■□□□□ 0.17
PNKP-213ENST00000599543 MAKP20794 623 aa16.1■□□□□ 0.17
PNKP-213ENST00000599543 IL2RGP31785 369 aa16.1■□□□□ 0.17
PNKP-213ENST00000599543 IFNA8P32881 189 aa16.1■□□□□ 0.17
PNKP-213ENST00000599543 ALDH3B1P43353 468 aa16.1■□□□□ 0.17
PNKP-213ENST00000599543 GPR4P46093 362 aa16.1■□□□□ 0.17
PNKP-213ENST00000599543 CLRN1P58418 232 aa16.1■□□□□ 0.17
PNKP-213ENST00000599543 SPIBQ01892 262 aa16.1■□□□□ 0.17
PNKP-213ENST00000599543 TRIP10Q15642 601 aa16.1■□□□□ 0.17
PNKP-213ENST00000599543 CR1LQ2VPA4 569 aa16.1■□□□□ 0.17
PNKP-213ENST00000599543 ZNF730Q6ZMV8 503 aa16.1■□□□□ 0.17
PNKP-213ENST00000599543 ZNF584Q8IVC4 421 aa16.1■□□□□ 0.17
PNKP-213ENST00000599543 ZDHHC21Q8IVQ6 265 aa16.1■□□□□ 0.17
PNKP-213ENST00000599543 FZR1Q9UM11 496 aa16.1■□□□□ 0.17
PNKP-213ENST00000599543 TRBV4-1A0A0J9YWV2 114 aa16.09■□□□□ 0.17
PNKP-213ENST00000599543 A0A1W2PPW3 197 aa16.09■□□□□ 0.17
PNKP-213ENST00000599543 A0A1W2PRG6 482 aa16.09■□□□□ 0.17
PNKP-213ENST00000599543 MCIDASD6RGH6 385 aa16.09■□□□□ 0.17
PNKP-213ENST00000599543 DHHO43323 396 aa16.09■□□□□ 0.17
PNKP-213ENST00000599543 FABP3P05413 133 aa16.09■□□□□ 0.17
PNKP-213ENST00000599543 QDPRP09417 244 aa16.09■□□□□ 0.17
PNKP-213ENST00000599543 RHCEP18577 417 aa16.09■□□□□ 0.17
PNKP-213ENST00000599543 CCNIQ14094 377 aa16.09■□□□□ 0.17
PNKP-213ENST00000599543 SEC23BQ15437 767 aa16.09■□□□□ 0.17
PNKP-213ENST00000599543 KRTAP24-1Q3LI83 254 aa16.09■□□□□ 0.17
PNKP-213ENST00000599543 PGM2L1Q6PCE3 622 aa16.09■□□□□ 0.17
PNKP-213ENST00000599543 LRFN4Q6PJG9 635 aa16.09■□□□□ 0.17
PNKP-213ENST00000599543 UGT2A3Q6UWM9 527 aa16.09■□□□□ 0.17
PNKP-213ENST00000599543 DPPA2Q7Z7J5 298 aa16.09■□□□□ 0.17
PNKP-213ENST00000599543 LINC01356Q8N9X3 169 aa16.09■□□□□ 0.17
PNKP-213ENST00000599543 SLC30A7Q8NEW0 376 aa16.09■□□□□ 0.17
PNKP-213ENST00000599543 OR4K5Q8NGD3 323 aa16.09■□□□□ 0.17
PNKP-213ENST00000599543 MOSPD2Q8NHP6 518 aa16.09■□□□□ 0.17
PNKP-213ENST00000599543 FGFBP3Q8TAT2 258 aa16.09■□□□□ 0.17
PNKP-213ENST00000599543 MCUR1Q96AQ8 359 aa16.09■□□□□ 0.17
PNKP-213ENST00000599543 ASB9Q96DX5 294 aa16.09■□□□□ 0.17
PNKP-213ENST00000599543 LRGUKQ96M69 825 aa16.09■□□□□ 0.17
PNKP-213ENST00000599543 SH3GL3Q99963 347 aa16.09■□□□□ 0.17
PNKP-213ENST00000599543 RNF121Q9H920 327 aa16.09■□□□□ 0.17
PNKP-213ENST00000599543 DUSP13Q9UII6 198 aa16.09■□□□□ 0.17
PNKP-213ENST00000599543 F13BP05160 661 aa16.08■□□□□ 0.16
PNKP-213ENST00000599543 AQP2P41181 271 aa16.08■□□□□ 0.16
PNKP-213ENST00000599543 ZNF84P51523 738 aa16.08■□□□□ 0.16
PNKP-213ENST00000599543 RPL18Q07020 188 aaKnown RBP16.08■□□□□ 0.16
PNKP-213ENST00000599543 PPP1R8Q12972 351 aaKnown RBP16.08■□□□□ 0.16
PNKP-213ENST00000599543 MAD2L1BPQ15013 274 aaPredicted RBP16.08■□□□□ 0.16
PNKP-213ENST00000599543 SLC36A2Q495M3 483 aa16.08■□□□□ 0.16
PNKP-213ENST00000599543 TMEM53Q6P2H8 277 aa16.08■□□□□ 0.16
PNKP-213ENST00000599543 HDDC2Q7Z4H3 204 aa16.08■□□□□ 0.16
PNKP-213ENST00000599543 LRP11Q86VZ4 500 aa16.08■□□□□ 0.16
PNKP-213ENST00000599543 NOXO1Q8NFA2 376 aa16.08■□□□□ 0.16
PNKP-213ENST00000599543 OR13C2Q8NGS9 318 aa16.08■□□□□ 0.16
PNKP-213ENST00000599543 SLC7A13Q8TCU3 470 aa16.08■□□□□ 0.16
PNKP-213ENST00000599543 ACOT11Q8WXI4 607 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms