RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 PPP1R3DO95685 299 aa12.01□□□□□ -0.49
UPF1-205ENST00000598209 NPR2P20594 1047 aa12.01□□□□□ -0.49
UPF1-205ENST00000598209 SDHAP31040 664 aa12.01□□□□□ -0.49
UPF1-205ENST00000598209 SLC6A6P31641 620 aa12.01□□□□□ -0.49
UPF1-205ENST00000598209 APOBEC3AP31941 199 aaPredicted RBP12.01□□□□□ -0.49
UPF1-205ENST00000598209 RASSF2P50749 326 aa12.01□□□□□ -0.49
UPF1-205ENST00000598209 RPS6KA3P51812 740 aa12.01□□□□□ -0.49
UPF1-205ENST00000598209 ATP5J2P56134 94 aa12.01□□□□□ -0.49
UPF1-205ENST00000598209 HGFACQ04756 655 aa12.01□□□□□ -0.49
UPF1-205ENST00000598209 TSPAN31Q12999 210 aa12.01□□□□□ -0.49
UPF1-205ENST00000598209 RAB39AQ14964 217 aa12.01□□□□□ -0.49
UPF1-205ENST00000598209 SGCAQ16586 387 aa12.01□□□□□ -0.49
UPF1-205ENST00000598209 RFX4Q33E94 735 aa12.01□□□□□ -0.49
UPF1-205ENST00000598209 SLC36A2Q495M3 483 aa12.01□□□□□ -0.49
UPF1-205ENST00000598209 C11orf71Q6IPW1 123 aa12.01□□□□□ -0.49
UPF1-205ENST00000598209 TMEM53Q6P2H8 277 aa12.01□□□□□ -0.49
UPF1-205ENST00000598209 DPPA2Q7Z7J5 298 aa12.01□□□□□ -0.49
UPF1-205ENST00000598209 SPATA24Q86W54 205 aa12.01□□□□□ -0.49
UPF1-205ENST00000598209 LRRC18Q8N456 261 aa12.01□□□□□ -0.49
UPF1-205ENST00000598209 LINC00471Q8N535 108 aa12.01□□□□□ -0.49
UPF1-205ENST00000598209 CANT1Q8WVQ1 401 aa12.01□□□□□ -0.49
UPF1-205ENST00000598209 NABP1Q96AH0 204 aa12.01□□□□□ -0.49
UPF1-205ENST00000598209 TRMT61AQ96FX7 289 aaKnown RBP12.01□□□□□ -0.49
UPF1-205ENST00000598209 CHID1Q9BWS9 393 aa12.01□□□□□ -0.49
UPF1-205ENST00000598209 REEP1Q9H902 201 aa12.01□□□□□ -0.49
UPF1-205ENST00000598209 RNF121Q9H920 327 aa12.01□□□□□ -0.49
UPF1-205ENST00000598209 SIAEQ9HAT2 523 aa12.01□□□□□ -0.49
UPF1-205ENST00000598209 CA10Q9NS85 328 aa12.01□□□□□ -0.49
UPF1-205ENST00000598209 FBXL3Q9UKT7 428 aa12.01□□□□□ -0.49
UPF1-205ENST00000598209 POMPQ9Y244 141 aa12.01□□□□□ -0.49
UPF1-205ENST00000598209 SAMHD1Q9Y3Z3 626 aaKnown RBP12.01□□□□□ -0.49
UPF1-205ENST00000598209 RTTNQ86VV8 2226 aa12.01□□□□□ -0.49
UPF1-205ENST00000598209 A0A1W2PPL8 197 aa12□□□□□ -0.49
UPF1-205ENST00000598209 PRSS37A4D1T9 235 aa12□□□□□ -0.49
UPF1-205ENST00000598209 SOCS2O14508 198 aa12□□□□□ -0.49
UPF1-205ENST00000598209 AHCYL1O43865 530 aa12□□□□□ -0.49
UPF1-205ENST00000598209 SERPINA5P05154 406 aa12□□□□□ -0.49
UPF1-205ENST00000598209 VHLLQ6RSH7 139 aa12□□□□□ -0.49
UPF1-205ENST00000598209 PRSS57Q6UWY2 283 aa12□□□□□ -0.49
UPF1-205ENST00000598209 ZNF620Q6ZNG0 422 aa12□□□□□ -0.49
UPF1-205ENST00000598209 YTHDF3Q7Z739 585 aaKnown RBP12□□□□□ -0.49
UPF1-205ENST00000598209 NUP37Q8NFH4 326 aa12□□□□□ -0.49
UPF1-205ENST00000598209 SAMD8Q96LT4 415 aa12□□□□□ -0.49
UPF1-205ENST00000598209 ERMAPQ96PL5 475 aaPredicted RBP12□□□□□ -0.49
UPF1-205ENST00000598209 CACNG6Q9BXT2 260 aa12□□□□□ -0.49
UPF1-205ENST00000598209 KCNN2Q9H2S1 579 aa12□□□□□ -0.49
UPF1-205ENST00000598209 SLC7A8Q9UHI5 535 aa12□□□□□ -0.49
UPF1-205ENST00000598209 U3KQV3 271 aa12□□□□□ -0.49
UPF1-205ENST00000598209 HIVEP1P15822 2718 aa12□□□□□ -0.49
UPF1-205ENST00000598209 TXNDC12O95881 172 aa11.99□□□□□ -0.49
UPF1-205ENST00000598209 CST1P01037 141 aa11.99□□□□□ -0.49
UPF1-205ENST00000598209 GASTP01350 101 aa11.99□□□□□ -0.49
UPF1-205ENST00000598209 MMP7P09237 267 aaPredicted RBP11.99□□□□□ -0.49
UPF1-205ENST00000598209 ZNF35P13682 527 aa11.99□□□□□ -0.49
UPF1-205ENST00000598209 APEHP13798 732 aaKnown RBP11.99□□□□□ -0.49
UPF1-205ENST00000598209 CD99P14209 185 aa11.99□□□□□ -0.49
UPF1-205ENST00000598209 GUCA1AP43080 201 aaPredicted RBP11.99□□□□□ -0.49
UPF1-205ENST00000598209 DAG1Q14118 895 aa11.99□□□□□ -0.49
UPF1-205ENST00000598209 ETFDHQ16134 617 aa11.99□□□□□ -0.49
UPF1-205ENST00000598209 FAM27BQ5VT28 67 aa11.99□□□□□ -0.49
UPF1-205ENST00000598209 ZNF770Q6IQ21 691 aaPredicted RBP11.99□□□□□ -0.49
UPF1-205ENST00000598209 KRT80Q6KB66 452 aa11.99□□□□□ -0.49
UPF1-205ENST00000598209 FOXL2NBQ6ZUU3 175 aa11.99□□□□□ -0.49
UPF1-205ENST00000598209 PTCHD4Q6ZW05 846 aa11.99□□□□□ -0.49
UPF1-205ENST00000598209 ADCK1Q86TW2 530 aa11.99□□□□□ -0.49
UPF1-205ENST00000598209 ZNF584Q8IVC4 421 aa11.99□□□□□ -0.49
UPF1-205ENST00000598209 AQP11Q8NBQ7 271 aa11.99□□□□□ -0.49
UPF1-205ENST00000598209 FBXO17Q96EF6 278 aa11.99□□□□□ -0.49
UPF1-205ENST00000598209 TMUB1Q9BVT8 246 aa11.99□□□□□ -0.49
UPF1-205ENST00000598209 IFT27Q9BW83 186 aa11.99□□□□□ -0.49
UPF1-205ENST00000598209 SYT4Q9H2B2 425 aa11.99□□□□□ -0.49
UPF1-205ENST00000598209 CCNB1IP1Q9NPC3 277 aa11.99□□□□□ -0.49
UPF1-205ENST00000598209 VSX1Q9NZR4 365 aaPredicted RBP11.99□□□□□ -0.49
UPF1-205ENST00000598209 TCRBV3S1A0A5B6 114 aa11.98□□□□□ -0.49
UPF1-205ENST00000598209 IMPA2O14732 288 aa11.98□□□□□ -0.49
UPF1-205ENST00000598209 ARPC3O15145 178 aa11.98□□□□□ -0.49
UPF1-205ENST00000598209 CTLA4P16410 223 aa11.98□□□□□ -0.49
UPF1-205ENST00000598209 ZNF32P17041 273 aa11.98□□□□□ -0.49
UPF1-205ENST00000598209 HOXB6P17509 224 aaKnown RBP11.98□□□□□ -0.49
UPF1-205ENST00000598209 NR4A1P22736 598 aa11.98□□□□□ -0.49
UPF1-205ENST00000598209 LAP3P28838 519 aa11.98□□□□□ -0.49
UPF1-205ENST00000598209 THBS4P35443 961 aa11.98□□□□□ -0.49
UPF1-205ENST00000598209 SERPINF1P36955 418 aa11.98□□□□□ -0.49
UPF1-205ENST00000598209 CDKN2AP42771 156 aaKnown RBP11.98□□□□□ -0.49
UPF1-205ENST00000598209 ERFP50548 548 aa11.98□□□□□ -0.49
UPF1-205ENST00000598209 HSF2Q03933 536 aa11.98□□□□□ -0.49
UPF1-205ENST00000598209 PLP2Q04941 152 aa11.98□□□□□ -0.49
UPF1-205ENST00000598209 SNTB2Q13425 540 aaKnown RBP11.98□□□□□ -0.49
UPF1-205ENST00000598209 GK3PQ14409 553 aa11.98□□□□□ -0.49
UPF1-205ENST00000598209 ADIPOQQ15848 244 aa11.98□□□□□ -0.49
UPF1-205ENST00000598209 MICAQ29983 383 aa11.98□□□□□ -0.49
UPF1-205ENST00000598209 MST1LQ2TV78 715 aa11.98□□□□□ -0.49
UPF1-205ENST00000598209 RPL13AP3Q6NVV1 102 aa11.98□□□□□ -0.49
UPF1-205ENST00000598209 SLC30A7Q8NEW0 376 aa11.98□□□□□ -0.49
UPF1-205ENST00000598209 Q96MF0 132 aa11.98□□□□□ -0.49
UPF1-205ENST00000598209 RERGLQ9H628 205 aa11.98□□□□□ -0.49
UPF1-205ENST00000598209 EGLN3Q9H6Z9 239 aa11.98□□□□□ -0.49
UPF1-205ENST00000598209 ZNF442Q9H7R0 627 aa11.98□□□□□ -0.49
UPF1-205ENST00000598209 GDF2Q9UK05 429 aaPredicted RBP11.98□□□□□ -0.49
UPF1-205ENST00000598209 SPEF1Q9Y4P9 236 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms