RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 GABRA1P14867 456 aa11.57□□□□□ -0.56
SHKBP1-209ENST00000595803 CTLA4P16410 223 aa11.57□□□□□ -0.56
SHKBP1-209ENST00000595803 SELENOPP49908 381 aa11.57□□□□□ -0.56
SHKBP1-209ENST00000595803 EMX1Q04741 257 aaPredicted RBP11.57□□□□□ -0.56
SHKBP1-209ENST00000595803 GGTLC2Q14390 218 aa11.57□□□□□ -0.56
SHKBP1-209ENST00000595803 NEDD8Q15843 81 aa11.57□□□□□ -0.56
SHKBP1-209ENST00000595803 ETFDHQ16134 617 aa11.57□□□□□ -0.56
SHKBP1-209ENST00000595803 LINC01590Q5TEZ4 76 aa11.57□□□□□ -0.56
SHKBP1-209ENST00000595803 RNLSQ5VYX0 342 aa11.57□□□□□ -0.56
SHKBP1-209ENST00000595803 SLC25A47Q6Q0C1 308 aa11.57□□□□□ -0.56
SHKBP1-209ENST00000595803 B3GNT6Q6ZMB0 384 aa11.57□□□□□ -0.56
SHKBP1-209ENST00000595803 C20orf196Q8IYI0 205 aa11.57□□□□□ -0.56
SHKBP1-209ENST00000595803 ACBD7Q8N6N7 88 aa11.57□□□□□ -0.56
SHKBP1-209ENST00000595803 POMGNT2Q8NAT1 580 aa11.57□□□□□ -0.56
SHKBP1-209ENST00000595803 OR10H4Q8NGA5 316 aa11.57□□□□□ -0.56
SHKBP1-209ENST00000595803 MCHR2Q969V1 340 aa11.57□□□□□ -0.56
SHKBP1-209ENST00000595803 TMEM45BQ96B21 275 aa11.57□□□□□ -0.56
SHKBP1-209ENST00000595803 SNRNP40Q96DI7 357 aaKnown RBP11.57□□□□□ -0.56
SHKBP1-209ENST00000595803 CNN2Q99439 309 aaKnown RBP11.57□□□□□ -0.56
SHKBP1-209ENST00000595803 RACGAP1Q9H0H5 632 aa11.57□□□□□ -0.56
SHKBP1-209ENST00000595803 ADGRL4Q9HBW9 690 aa11.57□□□□□ -0.56
SHKBP1-209ENST00000595803 B3GAT2Q9NPZ5 323 aa11.57□□□□□ -0.56
SHKBP1-209ENST00000595803 GLRX2Q9NS18 164 aa11.57□□□□□ -0.56
SHKBP1-209ENST00000595803 CLEC4AQ9UMR7 237 aa11.57□□□□□ -0.56
SHKBP1-209ENST00000595803 DNHD1Q96M86 4753 aa11.57□□□□□ -0.56
SHKBP1-209ENST00000595803 PRRC2CQ9Y520 2896 aaKnown RBP11.57□□□□□ -0.56
SHKBP1-209ENST00000595803 SHANK1Q9Y566 2161 aa11.57□□□□□ -0.56
SHKBP1-209ENST00000595803 ZNF407Q9C0G0 2248 aa11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 KIAA1549Q9HCM3 1950 aa11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 IGLV1-36A0A0B4J1U3 117 aa11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 KRT33AO76009 404 aa11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 TFAP2AP05549 437 aa11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 OR2T7P0C7T2 308 aa11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 ZNF823P16415 610 aa11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 ABOP16442 354 aa11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 JUNBP17275 347 aaPredicted RBP11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 PTGER4P35408 488 aa11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 GUCA1AP43080 201 aaPredicted RBP11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 ACTC1P68032 377 aa11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 ACTA1P68133 377 aa11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 GLO1Q04760 184 aa11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 FMODQ06828 376 aa11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 IRF3Q14653 427 aa11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 HIST3H3Q16695 136 aa11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 LRFN4Q6PJG9 635 aa11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 GFRALQ6UXV0 394 aa11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 SLC16A9Q7RTY1 509 aa11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 FGD2Q7Z6J4 655 aa11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 LHFPL3Q86UP9 236 aa11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 ERI1Q8IV48 349 aaKnown RBP11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 SLC35F2Q8IXU6 374 aa11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 GPR137CQ8N3F9 429 aa11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 OR2T27Q8NH04 317 aa11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 RORBQ92753 470 aa11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 WNT2BQ93097 391 aa11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 MARVELD3Q96A59 401 aa11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 SIGLEC11Q96RL6 698 aa11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 INTS14Q96SY0 518 aa11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 MYCBPQ99417 103 aaPredicted RBP11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 TBX5Q99593 518 aa11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 BCO1Q9HAY6 547 aa11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 GP6Q9HCN6 339 aa11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 ACOT13Q9NPJ3 140 aa11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 BATF3Q9NR55 127 aa11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 INPP5EQ9NRR6 644 aa11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 ERRFI1Q9UJM3 462 aaPredicted RBP11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 ING1Q9UK53 422 aaPredicted RBP11.56□□□□□ -0.56
SHKBP1-209ENST00000595803 DNAJC13O75165 2243 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 A0A1W2PPL8 197 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 OR6C65A6NJZ3 312 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 C12orf71A8MTZ7 269 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 ZNF99A8MXY4 864 aaPredicted RBP11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 ZNF670-ZNF695F2Z2N8 137 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 J3QRE1 110 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 ZNF593O00488 134 aaPredicted RBP11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 MYL12BO14950 172 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 DHHO43323 396 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 SELENOFO60613 162 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 WDR1O75083 606 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 HOXD4P09016 255 aaPredicted RBP11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 PCMT1P22061 227 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 LAP3P28838 519 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 NAA10P41227 235 aaPredicted RBP11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 ETV1P50549 477 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 ZNF84P51523 738 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 HSF2Q03933 536 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 MRPL49Q13405 166 aaKnown RBP11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 EIF2S3LQ2VIR3 472 aaKnown RBP11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 PHYHD1Q5SRE7 291 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 ADGRE4PQ86SQ3 457 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 GLB1L2Q8IW92 636 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 ZNF100Q8IYN0 542 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 TMEM123Q8N131 208 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 KLHL36Q8N4N3 616 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 NANOGP1Q8N7R0 232 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 OR10H5Q8NGA6 315 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 FAM57AQ8TBR7 257 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 FCGR1BQ92637 280 aa11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 NMD3Q96D46 503 aaKnown RBP11.55□□□□□ -0.56
SHKBP1-209ENST00000595803 MRPL48Q96GC5 212 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms