RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 SIAEQ9HAT2 523 aa9.5□□□□□ -0.89
SHKBP1-206ENST00000595523 AURKCQ9UQB9 309 aa9.5□□□□□ -0.89
SHKBP1-206ENST00000595523 TEX13CA0A0J9YWL9 993 aa9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 SLC22A23A1A5C7 686 aa9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 A6NIZ1 184 aa9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 H7C1Q1 480 aa9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 H7C417 338 aa9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 OR10H3O60404 316 aa9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 FARS2O95363 451 aaKnown RBP9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 RAB36O95755 333 aa9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 TXNDC12O95881 172 aa9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 SERPINA5P05154 406 aa9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 SCG5P05408 212 aa9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 OR4A8P0C604 315 aa9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 FOSL1P15407 271 aa9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 NR4A1P22736 598 aa9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 FPR3P25089 353 aa9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 THBS4P35443 961 aa9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 RAP1BP61224 184 aa9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 RAP1AP62834 184 aa9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 PPP1R8Q12972 351 aaKnown RBP9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 ETFDHQ16134 617 aa9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 THEM4Q5T1C6 240 aa9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 ZNF770Q6IQ21 691 aaPredicted RBP9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 KRT80Q6KB66 452 aa9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 C1orf94Q6P1W5 598 aa9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 PGBD2Q6P3X8 592 aa9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 VHLLQ6RSH7 139 aa9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 PTCHD4Q6ZW05 846 aa9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 SLC16A14Q7RTX9 510 aa9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 IL17RDQ8NFM7 739 aa9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 OR9Q2Q8NGE9 314 aa9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 FBXO17Q96EF6 278 aa9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 C18orf12Q96KH6 178 aa9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 ZNF570Q96NI8 536 aa9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 BTBD10Q9BSF8 475 aa9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 GSX1Q9H4S2 264 aaPredicted RBP9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 ZNF442Q9H7R0 627 aa9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 GRHPRQ9UBQ7 328 aa9.49□□□□□ -0.89
SHKBP1-206ENST00000595523 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.49□□□□□ -0.893e-7■■□□□ 13.4
SHKBP1-206ENST00000595523 HIVEP2P31629 2446 aa9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 TMEM129A0AVI4 362 aa9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 PRSS37A4D1T9 235 aa9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 GPRIN2O60269 458 aa9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 IGFBP1P08833 259 aaPredicted RBP9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 NR2C1P13056 603 aa9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 CCL2P13500 99 aa9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 CTLA4P16410 223 aa9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 NPR2P20594 1047 aa9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 SDHAP31040 664 aa9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 SERPINF1P36955 418 aa9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 DBPQ10586 325 aaPredicted RBP9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 TRAP1Q12931 704 aaKnown RBP9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 BNIP1Q12981 228 aa9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 SNTB2Q13425 540 aaKnown RBP9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 TNK1Q13470 666 aa9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 KRR1Q13601 381 aaKnown RBP9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 DAG1Q14118 895 aa9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 ENDOGQ14249 297 aaKnown RBP9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 EFNB3Q15768 340 aa9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 SGCAQ16586 387 aa9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 CLEC12BQ2HXU8 276 aa9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 SLC36A2Q495M3 483 aa9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 FAM27BQ5VT28 67 aa9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 SMARCD3Q6STE5 483 aa9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 DPY19L2P2Q6ZN68 376 aa9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 DPPA2Q7Z7J5 298 aa9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 ADGRG5Q8IZF4 528 aa9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 CPEB3Q8NE35 698 aaKnown RBP9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 FANK1Q8TC84 345 aa9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 FNDC8Q8TC99 324 aa9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 RBP7Q96R05 134 aa9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 OR52D1Q9H346 318 aa9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 PLK3Q9H4B4 646 aa9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 KRCC1Q9NPI7 259 aaPredicted RBP9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 VSX1Q9NZR4 365 aaPredicted RBP9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 FBXL3Q9UKT7 428 aa9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 IER3IP1Q9Y5U9 82 aa9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 MALRD1Q5VYJ5 2156 aa9.48□□□□□ -0.89
SHKBP1-206ENST00000595523 ANK3Q12955 4377 aaKnown RBP9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 B9A039 149 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 TNFRSF11BO00300 401 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 SOCS2O14508 198 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 GYG2O15488 501 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 AHCYL1O43865 530 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 SSX4O60224 188 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 ENTPD5O75356 428 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 KRT36O76013 467 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 LY6HO94772 140 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 PPP1R3DO95685 299 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 INHBBP09529 407 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 APEHP13798 732 aaKnown RBP9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 ZNF32P17041 273 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 APEX1P27695 318 aaKnown RBP9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 LAP3P28838 519 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 CDKN2AP42771 156 aaKnown RBP9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 PSG4Q00888 419 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 CHRNB3Q05901 458 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 TSPAN31Q12999 210 aa9.47□□□□□ -0.89
SHKBP1-206ENST00000595523 RFX4Q33E94 735 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms