RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 F13BP05160 661 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 IGFBP3P17936 291 aaPredicted RBP11.97□□□□□ -0.49
VRK3-209ENST00000594948 RAB3AP20336 220 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 COL9A1P20849 921 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 MPZP25189 248 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 GDI1P31150 447 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 SLC6A8P48029 635 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 CAPZA1P52907 286 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 ROM1Q03395 351 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 ZMYND11Q15326 602 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 ETFDHQ16134 617 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 ARHGAP40Q5TG30 622 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 UQCC3Q6UW78 93 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 CCDC36Q8IYA8 594 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 ZNF679Q8IYX0 411 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 STEAP2Q8NFT2 490 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 OR10Z1Q8NGY1 313 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 DUSP19Q8WTR2 217 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 FBXW5Q969U6 566 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 ZNF587Q96SQ5 575 aaPredicted RBP11.97□□□□□ -0.49
VRK3-209ENST00000594948 CHST6Q9GZX3 395 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 ADAM19Q9H013 955 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 ATG5Q9H1Y0 275 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 BARX1Q9HBU1 254 aaPredicted RBP11.97□□□□□ -0.49
VRK3-209ENST00000594948 STARD5Q9NSY2 213 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 DZANK1Q9NVP4 752 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 TNFSF18Q9UNG2 199 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 PLCL2Q9UPR0 1127 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 KANTRA0A1W2PQU2 76 aa11.96□□□□□ -0.49
VRK3-209ENST00000594948 DNASE2O00115 360 aaPredicted RBP11.96□□□□□ -0.49
VRK3-209ENST00000594948 SCDO00767 359 aa11.96□□□□□ -0.49
VRK3-209ENST00000594948 BCL2L11O43521 198 aa11.96□□□□□ -0.49
VRK3-209ENST00000594948 NUDT21O43809 227 aaKnown RBP11.96□□□□□ -0.49
VRK3-209ENST00000594948 CLPSP04118 112 aa11.96□□□□□ -0.49
VRK3-209ENST00000594948 HOXB2P14652 356 aa11.96□□□□□ -0.49
VRK3-209ENST00000594948 HSD17B7P56937 341 aa11.96□□□□□ -0.49
VRK3-209ENST00000594948 UBE2MP61081 183 aaKnown RBP11.96□□□□□ -0.49
VRK3-209ENST00000594948 YOD1Q5VVQ6 348 aaPredicted RBP11.96□□□□□ -0.49
VRK3-209ENST00000594948 SLC18B1Q6NT16 456 aa11.96□□□□□ -0.49
VRK3-209ENST00000594948 BEST3Q8N1M1 668 aa11.96□□□□□ -0.49
VRK3-209ENST00000594948 ZSCAN1Q8NBB4 408 aa11.96□□□□□ -0.49
VRK3-209ENST00000594948 OR10K1Q8NGX5 313 aa11.96□□□□□ -0.49
VRK3-209ENST00000594948 SLC41A2Q96JW4 573 aa11.96□□□□□ -0.49
VRK3-209ENST00000594948 PBX4Q9BYU1 374 aa11.96□□□□□ -0.49
VRK3-209ENST00000594948 ELOVL3Q9HB03 270 aa11.96□□□□□ -0.49
VRK3-209ENST00000594948 SLC2A8Q9NY64 477 aa11.96□□□□□ -0.49
VRK3-209ENST00000594948 CKLFQ9UBR5 152 aa11.96□□□□□ -0.49
VRK3-209ENST00000594948 A0A0A6YYC8 382 aaPredicted RBP11.95□□□□□ -0.5
VRK3-209ENST00000594948 I3L1I5 382 aaPredicted RBP11.95□□□□□ -0.5
VRK3-209ENST00000594948 OIP5O43482 229 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 HCRTR1O43613 425 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 NSA2O95478 260 aaKnown RBP11.95□□□□□ -0.5
VRK3-209ENST00000594948 TNFP01375 233 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 BGLAPP02818 100 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 CD2P06729 351 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 ZNF735P0CB33 412 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 ICAM2P13598 275 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 MST1P26927 711 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 CCKBRP32239 447 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 GPM6BQ13491 265 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 SERTAD2Q14140 314 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 MEF2DQ14814 521 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 ZNF169Q14929 603 aaPredicted RBP11.95□□□□□ -0.5
VRK3-209ENST00000594948 CD226Q15762 336 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 PHF19Q5T6S3 580 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 TMEM225Q6GV28 225 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 JMJD6Q6NYC1 403 aaPredicted RBP11.95□□□□□ -0.5
VRK3-209ENST00000594948 LRFN4Q6PJG9 635 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.95□□□□□ -0.5
VRK3-209ENST00000594948 C19orf47Q8N9M1 422 aaKnown RBP11.95□□□□□ -0.5
VRK3-209ENST00000594948 CLRN3Q8NCR9 226 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 OR1J4Q8NGS1 313 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 OR8K3Q8NH51 312 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 ULBP3Q9BZM4 244 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 LAT2Q9GZY6 243 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 S1PR5Q9H228 398 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 FAM60AQ9NP50 221 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 KCNG2Q9UJ96 466 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 DHDHQ9UQ10 334 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 PLEKHA6Q9Y2H5 1048 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 HS3ST3A1Q9Y663 406 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 A0A1W2PPC1 479 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 OR5H14A6NHG9 310 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 H7C1C5 153 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 LDLRAD4O15165 306 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 HPGDP15428 266 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 ST6GAL1P15907 406 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 HTR2CP28335 458 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 AKT2P31751 481 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 LCN6P62502 163 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 FLI1Q01543 452 aaPredicted RBP11.95□□□□□ -0.5
VRK3-209ENST00000594948 NNATQ16517 81 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 VWA2Q5GFL6 755 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 ATPAF1Q5TC12 328 aaPredicted RBP11.95□□□□□ -0.5
VRK3-209ENST00000594948 ASPHD2Q6ICH7 369 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 LIN54Q6MZP7 749 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 C11orf87Q6NUJ2 197 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 ARMC6Q6NXE6 501 aa11.95□□□□□ -0.5
VRK3-209ENST00000594948 KCTD18Q6PI47 426 aaPredicted RBP11.95□□□□□ -0.5
VRK3-209ENST00000594948 ADGRE4PQ86SQ3 457 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms