RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 HLA-DPB1P04440 258 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 ADRB1P08588 477 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 CLDN15P56746 228 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 DEFA1P59665 94 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 DEFA3P59666 94 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 CD300CQ08708 224 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 MADCAM1Q13477 382 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 TUSC1Q2TAM9 212 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 TMEM225Q6GV28 225 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 FAM131AQ6UXB0 335 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 ESPNLQ6ZVH7 1005 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 SLC35D2Q76EJ3 337 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 TRILQ7L0X0 811 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 WDFY1Q8IWB7 410 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 FAM109AQ8N4B1 249 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 ASB10Q8WXI3 467 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 ADGRG7Q96K78 797 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 ADGRL4Q9HBW9 690 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 BABAM2Q9NXR7 383 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 NPIPA1Q9UND3 350 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 PCDHGA9Q9Y5G4 932 aaKnown RBP11.79□□□□□ -0.52
VRK3-205ENST00000593919 SIRT4Q9Y6E7 314 aaPredicted RBP11.79□□□□□ -0.52
VRK3-205ENST00000593919 PRSS37A4D1T9 235 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 K7ENP7 123 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 DVL2O14641 736 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 RRP8O43159 456 aaKnown RBP11.79□□□□□ -0.52
VRK3-205ENST00000593919 EIF1BO60739 113 aaKnown RBP11.79□□□□□ -0.52
VRK3-205ENST00000593919 RENP00797 406 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 SBK2P0C263 348 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 DAP3P51398 398 aaKnown RBP11.79□□□□□ -0.52
VRK3-205ENST00000593919 SLC25A1P53007 311 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 ZNF79Q15937 498 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 HBMQ6B0K9 141 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 INO80CQ6PI98 192 aaPredicted RBP11.79□□□□□ -0.52
VRK3-205ENST00000593919 IGFL3Q6UXB1 125 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 UEVLDQ8IX04 471 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 PM20D2Q8IYS1 436 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 EXD3Q8N9H8 876 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 OR6K6Q8NGW6 343 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 NEIL3Q8TAT5 605 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 ZMYND19Q96E35 227 aaPredicted RBP11.79□□□□□ -0.52
VRK3-205ENST00000593919 TXNDC15Q96J42 360 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 TIMP4Q99727 224 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 TTTY10Q9BZA0 68 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 HAO2Q9NYQ3 351 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 NOX1Q9Y5S8 564 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 LIPGQ9Y5X9 500 aa11.79□□□□□ -0.52
VRK3-205ENST00000593919 PHF3Q92576 2039 aaKnown RBP11.79□□□□□ -0.52
VRK3-205ENST00000593919 SHISA3A0PJX4 238 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 J3QLW9 94 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 TRAF3IP2O43734 574 aaPredicted RBP11.78□□□□□ -0.52
VRK3-205ENST00000593919 RGS9O75916 674 aaPredicted RBP11.78□□□□□ -0.52
VRK3-205ENST00000593919 ITGB2P05107 769 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 ZNF19P17023 458 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 LHX2P50458 406 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 RAC3P60763 192 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 BDH1Q02338 343 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 C1QTNF12Q5T7M4 302 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 DDI2Q5TDH0 399 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 ARL9Q6T311 187 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 NHLRC1Q6VVB1 395 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 OR6V1Q8N148 313 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 ZADH2Q8N4Q0 377 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 OR10D3Q8NH80 312 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 AP3S1Q92572 193 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 DIRAS2Q96HU8 199 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 C4orf36Q96KX1 117 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 OXGR1Q96P68 337 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 SNX18Q96RF0 628 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 COQ7Q99807 217 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 ZDHHC11Q9H8X9 412 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 SRA1Q9HD15 236 aaKnown RBP11.78□□□□□ -0.52
VRK3-205ENST00000593919 ACKR4Q9NPB9 350 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 TRIM36Q9NQ86 728 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 TIGARQ9NQ88 270 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 INPP5EQ9NRR6 644 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 KLHL13Q9P2N7 655 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 COMMD3Q9UBI1 195 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 SLC35F4A4IF30 521 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 FAM171A2A8MVW0 826 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 E9PI62 339 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 DNPH1O43598 174 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 SSX4O60224 188 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 MT-ND5P03915 603 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 PDGFAP04085 211 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 ZNF43P17038 809 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 ENPP1P22413 925 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 PYCR1P32322 319 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 EIF1AXP47813 144 aaKnown RBP11.78□□□□□ -0.52
VRK3-205ENST00000593919 BIDP55957 195 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 CLDN18P56856 261 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 CARD18P57730 90 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 ZNF85Q03923 595 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 LGALS3BPQ08380 585 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 SLC10A1Q14973 349 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 PON3Q15166 354 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 SLC35D3Q5M8T2 416 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 LINC01590Q5TEZ4 76 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 LYPD4Q6UWN0 246 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 TMEM91Q6ZNR0 172 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms