RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 OR3A2P47893 321 aa17.36■□□□□ 0.37
LSM4-203ENST00000593829 NKX2-5P52952 324 aaPredicted RBP17.36■□□□□ 0.37
LSM4-203ENST00000593829 LTBQ06643 244 aa17.36■□□□□ 0.37
LSM4-203ENST00000593829 FOXD4Q12950 439 aaPredicted RBP17.36■□□□□ 0.37
LSM4-203ENST00000593829 ZNF100Q8IYN0 542 aa17.36■□□□□ 0.37
LSM4-203ENST00000593829 OR9K2Q8NGE7 335 aa17.36■□□□□ 0.37
LSM4-203ENST00000593829 TMEM255BQ8WV15 326 aa17.36■□□□□ 0.37
LSM4-203ENST00000593829 TMEM239Q8WW34 195 aa17.36■□□□□ 0.37
LSM4-203ENST00000593829 MOGAT1Q96PD6 335 aa17.36■□□□□ 0.37
LSM4-203ENST00000593829 RHCGQ9UBD6 479 aa17.36■□□□□ 0.37
LSM4-203ENST00000593829 SEC14L4Q9UDX3 406 aa17.36■□□□□ 0.37
LSM4-203ENST00000593829 TBC1D24Q9ULP9 559 aa17.36■□□□□ 0.37
LSM4-203ENST00000593829 FLVCR1Q9Y5Y0 555 aa17.36■□□□□ 0.37
LSM4-203ENST00000593829 FFAR1O14842 300 aa17.35■□□□□ 0.37
LSM4-203ENST00000593829 LIMS1P48059 325 aa17.35■□□□□ 0.37
LSM4-203ENST00000593829 FAM27E3Q08E93 113 aa17.35■□□□□ 0.37
LSM4-203ENST00000593829 SNTB1Q13884 538 aaKnown RBP17.35■□□□□ 0.37
LSM4-203ENST00000593829 ATAD3CQ5T2N8 411 aa17.35■□□□□ 0.37
LSM4-203ENST00000593829 ADPRHL1Q8NDY3 354 aa17.35■□□□□ 0.37
LSM4-203ENST00000593829 MGLLQ99685 303 aa17.35■□□□□ 0.37
LSM4-203ENST00000593829 RNF167Q9H6Y7 350 aa17.35■□□□□ 0.37
LSM4-203ENST00000593829 PARPBPQ9NWS1 579 aa17.35■□□□□ 0.37
LSM4-203ENST00000593829 IMPAD1Q9NX62 359 aa17.35■□□□□ 0.37
LSM4-203ENST00000593829 CAB39Q9Y376 341 aaPredicted RBP17.35■□□□□ 0.37
LSM4-203ENST00000593829 LRRN3E7EW58 273 aa17.35■□□□□ 0.37
LSM4-203ENST00000593829 MRPL33O75394 65 aaKnown RBP17.35■□□□□ 0.37
LSM4-203ENST00000593829 CH25HO95992 272 aa17.35■□□□□ 0.37
LSM4-203ENST00000593829 TRAM2Q15035 370 aa17.35■□□□□ 0.37
LSM4-203ENST00000593829 POU4F3Q15319 338 aa17.35■□□□□ 0.37
LSM4-203ENST00000593829 ZNF74Q16587 644 aa17.35■□□□□ 0.37
LSM4-203ENST00000593829 C6orf183Q5T699 404 aa17.35■□□□□ 0.37
LSM4-203ENST00000593829 MARVELD3Q96A59 401 aa17.35■□□□□ 0.37
LSM4-203ENST00000593829 CEP19Q96LK0 163 aa17.35■□□□□ 0.37
LSM4-203ENST00000593829 ZNF556Q9HAH1 456 aa17.35■□□□□ 0.37
LSM4-203ENST00000593829 SMURF1Q9HCE7 757 aa17.35■□□□□ 0.37
LSM4-203ENST00000593829 MEPEQ9NQ76 525 aaPredicted RBP17.35■□□□□ 0.37
LSM4-203ENST00000593829 MED31Q9Y3C7 131 aa17.35■□□□□ 0.37
LSM4-203ENST00000593829 RHCEP18577 417 aa17.34■□□□□ 0.37
LSM4-203ENST00000593829 KIR2DL3P43628 341 aa17.34■□□□□ 0.37
LSM4-203ENST00000593829 NUDT6P53370 316 aa17.34■□□□□ 0.37
LSM4-203ENST00000593829 CDC42P60953 191 aa17.34■□□□□ 0.37
LSM4-203ENST00000593829 KDM8Q8N371 416 aa17.34■□□□□ 0.37
LSM4-203ENST00000593829 ZIC4Q8N9L1 334 aa17.34■□□□□ 0.37
LSM4-203ENST00000593829 TMEM45BQ96B21 275 aa17.34■□□□□ 0.37
LSM4-203ENST00000593829 APH1AQ96BI3 265 aa17.34■□□□□ 0.37
LSM4-203ENST00000593829 OXGR1Q96P68 337 aa17.34■□□□□ 0.37
LSM4-203ENST00000593829 FKRPQ9H9S5 495 aa17.34■□□□□ 0.37
LSM4-203ENST00000593829 AMBNQ9NP70 447 aa17.34■□□□□ 0.37
LSM4-203ENST00000593829 NANSQ9NR45 359 aa17.34■□□□□ 0.37
LSM4-203ENST00000593829 MRPL39Q9NYK5 338 aaKnown RBP17.34■□□□□ 0.37
LSM4-203ENST00000593829 TUBAL3A6NHL2 446 aa17.33■□□□□ 0.37
LSM4-203ENST00000593829 ZAR1LA6NP61 321 aa17.33■□□□□ 0.37
LSM4-203ENST00000593829 IGF2P01344 180 aa17.33■□□□□ 0.37
LSM4-203ENST00000593829 TNFSF8P32971 234 aa17.33■□□□□ 0.37
LSM4-203ENST00000593829 NTF4P34130 210 aa17.33■□□□□ 0.37
LSM4-203ENST00000593829 RNLSQ5VYX0 342 aa17.33■□□□□ 0.37
LSM4-203ENST00000593829 CREB3L2Q70SY1 520 aa17.33■□□□□ 0.37
LSM4-203ENST00000593829 SPATC1Q76KD6 591 aa17.33■□□□□ 0.37
LSM4-203ENST00000593829 NANOGNBQ7Z5D8 188 aa17.33■□□□□ 0.37
LSM4-203ENST00000593829 NIPSNAP1Q9BPW8 284 aa17.33■□□□□ 0.37
LSM4-203ENST00000593829 NMNAT1Q9HAN9 279 aaPredicted RBP17.33■□□□□ 0.37
LSM4-203ENST00000593829 MAN2C1Q9NTJ4 1040 aa17.33■□□□□ 0.37
LSM4-203ENST00000593829 C16orf97H3BN30 126 aa17.33■□□□□ 0.36
LSM4-203ENST00000593829 SCG5P05408 212 aa17.33■□□□□ 0.36
LSM4-203ENST00000593829 ZNF43P17038 809 aa17.33■□□□□ 0.36
LSM4-203ENST00000593829 EDNRAP25101 427 aa17.33■□□□□ 0.36
LSM4-203ENST00000593829 SPIBQ01892 262 aa17.33■□□□□ 0.36
LSM4-203ENST00000593829 CDK10Q15131 360 aa17.33■□□□□ 0.36
LSM4-203ENST00000593829 TSTQ16762 297 aaKnown RBP17.33■□□□□ 0.36
LSM4-203ENST00000593829 MEDAGQ5VYS4 303 aa17.33■□□□□ 0.36
LSM4-203ENST00000593829 CASP12Q6UXS9 341 aa17.33■□□□□ 0.36
LSM4-203ENST00000593829 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.33■□□□□ 0.36
LSM4-203ENST00000593829 ASCC1Q8N9N2 400 aaKnown RBP17.33■□□□□ 0.36
LSM4-203ENST00000593829 OR5J2Q8NH18 312 aa17.33■□□□□ 0.36
LSM4-203ENST00000593829 PFN4Q8NHR9 129 aa17.33■□□□□ 0.36
LSM4-203ENST00000593829 ST6GAL2Q96JF0 529 aa17.33■□□□□ 0.36
LSM4-203ENST00000593829 ZNF385AQ96PM9 386 aaKnown RBP17.33■□□□□ 0.36
LSM4-203ENST00000593829 CLN6Q9NWW5 311 aa17.33■□□□□ 0.36
LSM4-203ENST00000593829 B3GAT1Q9P2W7 334 aa17.33■□□□□ 0.36
LSM4-203ENST00000593829 PRSS50Q9UI38 385 aa17.33■□□□□ 0.36
LSM4-203ENST00000593829 LOC102725191A0A1B0GVB3 256 aa17.32■□□□□ 0.36
LSM4-203ENST00000593829 HMX3A6NHT5 357 aa17.32■□□□□ 0.36
LSM4-203ENST00000593829 MS4A18H0YCH9 400 aa17.32■□□□□ 0.36
LSM4-203ENST00000593829 CNOT4O95628 575 aaKnown RBP17.32■□□□□ 0.36
LSM4-203ENST00000593829 HIST1H2ABP04908 130 aa17.32■□□□□ 0.36
LSM4-203ENST00000593829 C1DQ13901 141 aaKnown RBP17.32■□□□□ 0.36
LSM4-203ENST00000593829 SSX1Q16384 188 aa17.32■□□□□ 0.36
LSM4-203ENST00000593829 MS4A18Q3C1V0 323 aa17.32■□□□□ 0.36
LSM4-203ENST00000593829 Q6ZT83 130 aa17.32■□□□□ 0.36
LSM4-203ENST00000593829 HIST3H2AQ7L7L0 130 aa17.32■□□□□ 0.36
LSM4-203ENST00000593829 AAED1Q7RTV5 226 aa17.32■□□□□ 0.36
LSM4-203ENST00000593829 GABRG1Q8N1C3 465 aa17.32■□□□□ 0.36
LSM4-203ENST00000593829 HIST1H2ACQ93077 130 aa17.32■□□□□ 0.36
LSM4-203ENST00000593829 SGTBQ96EQ0 304 aa17.32■□□□□ 0.36
LSM4-203ENST00000593829 ANKRD19PQ9H560 264 aa17.32■□□□□ 0.36
LSM4-203ENST00000593829 KCNN3Q9UGI6 736 aa17.32■□□□□ 0.36
LSM4-203ENST00000593829 NDRG3Q9UGV2 375 aa17.32■□□□□ 0.36
LSM4-203ENST00000593829 PLPP3O14495 311 aa17.31■□□□□ 0.36
LSM4-203ENST00000593829 CTDSP2O14595 271 aa17.31■□□□□ 0.36
LSM4-203ENST00000593829 GPX5O75715 221 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms