RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 DECR2Q9NUI1 292 aa20.38■□□□□ 0.85
LSM4-202ENST00000593564 OR5F1O95221 314 aa20.37■□□□□ 0.85
LSM4-202ENST00000593564 TSPAN19P0C672 248 aa20.37■□□□□ 0.85
LSM4-202ENST00000593564 DRD4P21917 467 aa20.37■□□□□ 0.85
LSM4-202ENST00000593564 CFPP27918 469 aa20.37■□□□□ 0.85
LSM4-202ENST00000593564 AQP2P41181 271 aa20.37■□□□□ 0.85
LSM4-202ENST00000593564 MVKQ03426 396 aa20.37■□□□□ 0.85
LSM4-202ENST00000593564 ARMC4Q5T2S8 1044 aa20.37■□□□□ 0.85
LSM4-202ENST00000593564 C1orf229Q6ZS94 237 aaPredicted RBP20.37■□□□□ 0.85
LSM4-202ENST00000593564 OR1J1Q8NGS3 322 aa20.37■□□□□ 0.85
LSM4-202ENST00000593564 TMEM255BQ8WV15 326 aa20.37■□□□□ 0.85
LSM4-202ENST00000593564 LIPHQ8WWY8 451 aa20.37■□□□□ 0.85
LSM4-202ENST00000593564 GTF3AQ92664 365 aaKnown RBP20.37■□□□□ 0.85
LSM4-202ENST00000593564 NMD3Q96D46 503 aaKnown RBP20.37■□□□□ 0.85
LSM4-202ENST00000593564 MAGEB18Q96M61 343 aa20.37■□□□□ 0.85
LSM4-202ENST00000593564 KCNN2Q9H2S1 579 aa20.37■□□□□ 0.85
LSM4-202ENST00000593564 SMURF2Q9HAU4 748 aa20.37■□□□□ 0.85
LSM4-202ENST00000593564 C20orf141Q9NUB4 165 aa20.37■□□□□ 0.85
LSM4-202ENST00000593564 SH3GLB1Q9Y371 365 aa20.37■□□□□ 0.85
LSM4-202ENST00000593564 UGT2A1Q9Y4X1 527 aa20.37■□□□□ 0.85
LSM4-202ENST00000593564 NPIPB13A6NJU9 1138 aa20.36■□□□□ 0.85
LSM4-202ENST00000593564 CLDN25C9JDP6 229 aa20.36■□□□□ 0.85
LSM4-202ENST00000593564 NPIPB4C9JG80 1138 aa20.36■□□□□ 0.85
LSM4-202ENST00000593564 DEAF1O75398 565 aaPredicted RBP20.36■□□□□ 0.85
LSM4-202ENST00000593564 MPZL1O95297 269 aa20.36■□□□□ 0.85
LSM4-202ENST00000593564 SLC2A10O95528 541 aa20.36■□□□□ 0.85
LSM4-202ENST00000593564 STOMP27105 288 aa20.36■□□□□ 0.85
LSM4-202ENST00000593564 TAS2R41P59536 307 aa20.36■□□□□ 0.85
LSM4-202ENST00000593564 NANOGP8Q6NSW7 305 aa20.36■□□□□ 0.85
LSM4-202ENST00000593564 THSD4Q6ZMP0 1018 aa20.36■□□□□ 0.85
LSM4-202ENST00000593564 USP51Q70EK9 711 aa20.36■□□□□ 0.85
LSM4-202ENST00000593564 USP43Q70EL4 1123 aa20.36■□□□□ 0.85
LSM4-202ENST00000593564 TMEM239Q8WW34 195 aa20.36■□□□□ 0.85
LSM4-202ENST00000593564 NABP1Q96AH0 204 aa20.36■□□□□ 0.85
LSM4-202ENST00000593564 SAP30LQ9HAJ7 183 aa20.36■□□□□ 0.85
LSM4-202ENST00000593564 CCNB1IP1Q9NPC3 277 aa20.36■□□□□ 0.85
LSM4-202ENST00000593564 RIMS3Q9UJD0 308 aa20.36■□□□□ 0.85
LSM4-202ENST00000593564 BAG5Q9UL15 447 aa20.36■□□□□ 0.85
LSM4-202ENST00000593564 TPD52L2O43399 206 aaKnown RBP20.35■□□□□ 0.85
LSM4-202ENST00000593564 AVPP01185 164 aa20.35■□□□□ 0.85
LSM4-202ENST00000593564 EPHA1P21709 976 aa20.35■□□□□ 0.85
LSM4-202ENST00000593564 CDAP32320 146 aa20.35■□□□□ 0.85
LSM4-202ENST00000593564 HILS1P60008 231 aa20.35■□□□□ 0.85
LSM4-202ENST00000593564 GLO1Q04760 184 aa20.35■□□□□ 0.85
LSM4-202ENST00000593564 CYLC2Q14093 348 aaPredicted RBP20.35■□□□□ 0.85
LSM4-202ENST00000593564 TSTQ16762 297 aaKnown RBP20.35■□□□□ 0.85
LSM4-202ENST00000593564 FAM209AQ5JX71 171 aa20.35■□□□□ 0.85
LSM4-202ENST00000593564 METTL21CQ5VZV1 264 aa20.35■□□□□ 0.85
LSM4-202ENST00000593564 CALHM3Q86XJ0 350 aa20.35■□□□□ 0.85
LSM4-202ENST00000593564 MOSPD2Q8NHP6 518 aa20.35■□□□□ 0.85
LSM4-202ENST00000593564 TIMD4Q96H15 378 aa20.35■□□□□ 0.85
LSM4-202ENST00000593564 POM121L2Q96KW2 1035 aa20.35■□□□□ 0.85
LSM4-202ENST00000593564 SH3GL1Q99961 368 aa20.35■□□□□ 0.85
LSM4-202ENST00000593564 SIKE1Q9BRV8 207 aa20.35■□□□□ 0.85
LSM4-202ENST00000593564 NPHS2Q9NP85 383 aa20.35■□□□□ 0.85
LSM4-202ENST00000593564 PCDHB10Q9UN67 800 aa20.35■□□□□ 0.85
LSM4-202ENST00000593564 WIPI2Q9Y4P8 454 aa20.35■□□□□ 0.85
LSM4-202ENST00000593564 LOC105371242A0A075B767 164 aa20.34■□□□□ 0.85
LSM4-202ENST00000593564 A0A0G2JMP0 313 aa20.34■□□□□ 0.85
LSM4-202ENST00000593564 A0A0X1KG70 313 aa20.34■□□□□ 0.85
LSM4-202ENST00000593564 FBP2O00757 339 aa20.34■□□□□ 0.85
LSM4-202ENST00000593564 PLPP2O43688 288 aa20.34■□□□□ 0.85
LSM4-202ENST00000593564 IGHV2-5P01817 119 aa20.34■□□□□ 0.85
LSM4-202ENST00000593564 NR2C1P13056 603 aa20.34■□□□□ 0.85
LSM4-202ENST00000593564 ZNF32P17041 273 aa20.34■□□□□ 0.85
LSM4-202ENST00000593564 TNFRSF1BP20333 461 aa20.34■□□□□ 0.85
LSM4-202ENST00000593564 CCNOP22674 350 aa20.34■□□□□ 0.85
LSM4-202ENST00000593564 WNT5AP41221 380 aa20.34■□□□□ 0.85
LSM4-202ENST00000593564 COMPP49747 757 aaPredicted RBP20.34■□□□□ 0.85
LSM4-202ENST00000593564 ZNF81P51508 661 aa20.34■□□□□ 0.85
LSM4-202ENST00000593564 PIN1Q13526 163 aaPredicted RBP20.34■□□□□ 0.85
LSM4-202ENST00000593564 HFEQ30201 348 aa20.34■□□□□ 0.85
LSM4-202ENST00000593564 ZNF718Q3SXZ3 478 aa20.34■□□□□ 0.85
LSM4-202ENST00000593564 ZNF101Q8IZC7 436 aa20.34■□□□□ 0.85
LSM4-202ENST00000593564 OR4M2Q8NGB6 313 aa20.34■□□□□ 0.85
LSM4-202ENST00000593564 HDAC2Q92769 488 aaKnown RBP20.34■□□□□ 0.85
LSM4-202ENST00000593564 ELMOD3Q96FG2 381 aa20.34■□□□□ 0.85
LSM4-202ENST00000593564 CACNG2Q9Y698 323 aa20.34■□□□□ 0.85
LSM4-202ENST00000593564 IGKV1D-43A0A0B4J1Z2 117 aa20.33■□□□□ 0.85
LSM4-202ENST00000593564 GMNCA6NCL1 334 aa20.33■□□□□ 0.85
LSM4-202ENST00000593564 J3QLI3 93 aa20.33■□□□□ 0.85
LSM4-202ENST00000593564 THRBP10828 461 aa20.33■□□□□ 0.85
LSM4-202ENST00000593564 GCH1P30793 250 aa20.33■□□□□ 0.85
LSM4-202ENST00000593564 MMP15P51511 669 aa20.33■□□□□ 0.85
LSM4-202ENST00000593564 ACTG1P63261 375 aa20.33■□□□□ 0.85
LSM4-202ENST00000593564 FMODQ06828 376 aa20.33■□□□□ 0.85
LSM4-202ENST00000593564 RABL3Q5HYI8 236 aa20.33■□□□□ 0.85
LSM4-202ENST00000593564 UNQ6126/PRO20091Q6UXV3 157 aa20.33■□□□□ 0.85
LSM4-202ENST00000593564 C1QL2Q7Z5L3 287 aa20.33■□□□□ 0.85
LSM4-202ENST00000593564 OR8J3Q8NGG0 315 aa20.33■□□□□ 0.85
LSM4-202ENST00000593564 FAM216AQ8WUB2 273 aa20.33■□□□□ 0.85
LSM4-202ENST00000593564 RAB1CQ92928 201 aa20.33■□□□□ 0.85
LSM4-202ENST00000593564 MARS2Q96GW9 593 aaKnown RBP20.33■□□□□ 0.85
LSM4-202ENST00000593564 TMPRSS13Q9BYE2 586 aa20.33■□□□□ 0.85
LSM4-202ENST00000593564 TXNIPQ9H3M7 391 aa20.33■□□□□ 0.85
LSM4-202ENST00000593564 EIF3KQ9UBQ5 218 aaKnown RBP20.33■□□□□ 0.85
LSM4-202ENST00000593564 MED31Q9Y3C7 131 aa20.33■□□□□ 0.85
LSM4-202ENST00000593564 LOC100509620A0A075B734 347 aa20.32■□□□□ 0.84
LSM4-202ENST00000593564 A0A0G2JND7 137 aa20.32■□□□□ 0.84
LSM4-202ENST00000593564 C5orf49A4QMS7 147 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms