RNA–Protein interactions for RNA: ENST00000593099.5

LIG3-216, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 4,664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-216ENST00000593099 OR2M5A3KFT3 312 aa8.9□□□□□ -0.99
LIG3-216ENST00000593099 FAM25EA8MYX2 175 aa8.9□□□□□ -0.99
LIG3-216ENST00000593099 DHHO43323 396 aa8.9□□□□□ -0.99
LIG3-216ENST00000593099 DOK2O60496 412 aa8.9□□□□□ -0.99
LIG3-216ENST00000593099 DNAJB6O75190 326 aa8.9□□□□□ -0.99
LIG3-216ENST00000593099 HRGP04196 525 aa8.9□□□□□ -0.99
LIG3-216ENST00000593099 PGAM2P15259 253 aa8.9□□□□□ -0.99
LIG3-216ENST00000593099 ADH6P28332 368 aa8.9□□□□□ -0.99
LIG3-216ENST00000593099 ARR3P36575 388 aa8.9□□□□□ -0.99
LIG3-216ENST00000593099 CD96P40200 585 aa8.9□□□□□ -0.99
LIG3-216ENST00000593099 CA5BP1Q8WTZ4 195 aa8.9□□□□□ -0.99
LIG3-216ENST00000593099 C11orf40Q8WZ69 217 aa8.9□□□□□ -0.99
LIG3-216ENST00000593099 FAM131CQ96AQ9 280 aa8.9□□□□□ -0.99
LIG3-216ENST00000593099 C12orf43Q96C57 262 aaKnown RBP8.9□□□□□ -0.99
LIG3-216ENST00000593099 SPSB2Q99619 263 aa8.9□□□□□ -0.99
LIG3-216ENST00000593099 PAPOLGQ9BWT3 736 aaKnown RBP8.9□□□□□ -0.99
LIG3-216ENST00000593099 ZNF442Q9H7R0 627 aa8.9□□□□□ -0.99
LIG3-216ENST00000593099 TIMM10BQ9Y5J6 103 aa8.9□□□□□ -0.99
LIG3-216ENST00000593099 DISC1C4P0D8 188 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 LRRN3E7EW58 273 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 RAB4BP61018 213 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 HNRNPA0Q13151 305 aaKnown RBP8.89□□□□□ -0.99
LIG3-216ENST00000593099 SQSTM1Q13501 440 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 RAB11BQ15907 218 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 SLC25A24Q6NUK1 477 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 CBLN3Q6UW01 205 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 GALNT11Q8NCW6 608 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 OR2M7Q8NG81 312 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 OR10D3Q8NH80 312 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 TERB2Q8NHR7 220 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 TSNAXQ99598 290 aaKnown RBP8.89□□□□□ -0.99
LIG3-216ENST00000593099 THADAQ6YHU6 1953 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 SOCS6O14544 535 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 UCHL1P09936 223 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 MAKP20794 623 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 HTR1FP30939 366 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 ATP1B3P54709 279 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 RHEBQ15382 184 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 PLCXD3Q63HM9 321 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 KDM4DQ6B0I6 523 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 B3GLCTQ6Y288 498 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 C1QTNF6Q9BXI9 259 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 TBC1D24Q9ULP9 559 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 ADAM18Q9Y3Q7 739 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 HTR3BO95264 441 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 CDK1P06493 297 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 CTSBP07858 339 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 CT45A8P0DMV1 189 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 CT45A9P0DMV2 189 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 RAB3BP20337 219 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 VAMP1P23763 118 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 GRB2P62993 217 aaKnown RBP8.89□□□□□ -0.99
LIG3-216ENST00000593099 RPL19P84098 196 aaKnown RBP8.89□□□□□ -0.99
LIG3-216ENST00000593099 ABCA11PQ4W5N1 156 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 CT45A2Q5DJT8 189 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 MOB3CQ70IA8 216 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 TIPARPQ7Z3E1 657 aaKnown RBP8.89□□□□□ -0.99
LIG3-216ENST00000593099 MKXQ8IYA7 352 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 ZNF582Q96NG8 517 aaPredicted RBP8.89□□□□□ -0.99
LIG3-216ENST00000593099 ZNF696Q9H7X3 374 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 C12orf10Q9HB07 376 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 CRLF2Q9HC73 371 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 FAM230AA0A1W2PPH8 454 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 GPRIN2O60269 458 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 FBXO45P0C2W1 286 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 MAGEA5P43359 124 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 MAP2K3P46734 347 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 TEKQ02763 1124 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 ARL6IP1Q15041 203 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 AKR1C8PQ5T2L2 129 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 PAQR6Q6TCH4 344 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 GPR119Q8TDV5 335 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 FAM46BQ96A09 425 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 HAVCR1Q96D42 359 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 KTI12Q96EK9 354 aaPredicted RBP8.89□□□□□ -0.99
LIG3-216ENST00000593099 SLC25A44Q96H78 314 aaPredicted RBP8.89□□□□□ -0.99
LIG3-216ENST00000593099 CMC2Q9NRP2 79 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 AASSQ9UDR5 926 aa8.89□□□□□ -0.99
LIG3-216ENST00000593099 H3BSA7 217 aa8.88□□□□□ -0.99
LIG3-216ENST00000593099 PET100P0DJ07 73 aa8.88□□□□□ -0.99
LIG3-216ENST00000593099 BMP5P22003 454 aa8.88□□□□□ -0.99
LIG3-216ENST00000593099 SLC2A5P22732 501 aa8.88□□□□□ -0.99
LIG3-216ENST00000593099 ZNF74Q16587 644 aa8.88□□□□□ -0.99
LIG3-216ENST00000593099 MEP1BQ16820 701 aa8.88□□□□□ -0.99
LIG3-216ENST00000593099 AWAT2Q6E213 333 aa8.88□□□□□ -0.99
LIG3-216ENST00000593099 RPL22L1Q6P5R6 122 aaKnown RBP8.88□□□□□ -0.99
LIG3-216ENST00000593099 SNX29P2Q8IUI4 249 aa8.88□□□□□ -0.99
LIG3-216ENST00000593099 GCNT2Q8N0V5 402 aa8.88□□□□□ -0.99
LIG3-216ENST00000593099 ATG5Q9H1Y0 275 aa8.88□□□□□ -0.99
LIG3-216ENST00000593099 TREM1Q9NP99 234 aa8.88□□□□□ -0.99
LIG3-216ENST00000593099 ATP23Q9Y6H3 246 aa8.88□□□□□ -0.99
LIG3-216ENST00000593099 FCER2P06734 321 aa8.88□□□□□ -0.99
LIG3-216ENST00000593099 ADH7P40394 386 aa8.88□□□□□ -0.99
LIG3-216ENST00000593099 ZFP36L1Q07352 338 aaKnown RBP8.88□□□□□ -0.99
LIG3-216ENST00000593099 FAM198BQ6UWH4 519 aa8.88□□□□□ -0.99
LIG3-216ENST00000593099 DCXRQ7Z4W1 244 aa8.88□□□□□ -0.99
LIG3-216ENST00000593099 SAMD12Q8N8I0 201 aa8.88□□□□□ -0.99
LIG3-216ENST00000593099 ZNF565Q8N9K5 539 aa8.88□□□□□ -0.99
LIG3-216ENST00000593099 SGCDQ92629 289 aa8.88□□□□□ -0.99
LIG3-216ENST00000593099 SCGB3A2Q96PL1 93 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms