RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 LRRC18Q8N456 261 aa23.5■■□□□ 1.35
SMAD4-213ENST00000591914 ZNF525Q8N782 197 aa23.5■■□□□ 1.35
SMAD4-213ENST00000591914 NSMAFQ92636 917 aa23.5■■□□□ 1.35
SMAD4-213ENST00000591914 SORCS2Q96PQ0 1159 aa23.5■■□□□ 1.35
SMAD4-213ENST00000591914 DOK1Q99704 481 aa23.5■■□□□ 1.35
SMAD4-213ENST00000591914 NDEL1Q9GZM8 345 aa23.5■■□□□ 1.35
SMAD4-213ENST00000591914 C1orf198Q9H425 327 aa23.5■■□□□ 1.35
SMAD4-213ENST00000591914 RNF121Q9H920 327 aa23.5■■□□□ 1.35
SMAD4-213ENST00000591914 IL1RAPQ9NPH3 570 aa23.5■■□□□ 1.35
SMAD4-213ENST00000591914 KRCC1Q9NPI7 259 aaPredicted RBP23.5■■□□□ 1.35
SMAD4-213ENST00000591914 ACTR3BQ9P1U1 418 aa23.5■■□□□ 1.35
SMAD4-213ENST00000591914 ADAM21Q9UKJ8 722 aa23.5■■□□□ 1.35
SMAD4-213ENST00000591914 IGHV4-30-2A0A087WSY4 118 aa23.49■■□□□ 1.35
SMAD4-213ENST00000591914 TMEM129A0AVI4 362 aa23.49■■□□□ 1.35
SMAD4-213ENST00000591914 GADD45GO95257 159 aa23.49■■□□□ 1.35
SMAD4-213ENST00000591914 FABP3P05413 133 aa23.49■■□□□ 1.35
SMAD4-213ENST00000591914 T-ENOLP0DO92 83 aa23.49■■□□□ 1.35
SMAD4-213ENST00000591914 CALB2P22676 271 aa23.49■■□□□ 1.35
SMAD4-213ENST00000591914 GLRXP35754 106 aa23.49■■□□□ 1.35
SMAD4-213ENST00000591914 SVOPLQ8N434 492 aa23.49■■□□□ 1.35
SMAD4-213ENST00000591914 SLC30A7Q8NEW0 376 aa23.49■■□□□ 1.35
SMAD4-213ENST00000591914 GPX7Q96SL4 187 aaPredicted RBP23.49■■□□□ 1.35
SMAD4-213ENST00000591914 GRHPRQ9UBQ7 328 aa23.49■■□□□ 1.35
SMAD4-213ENST00000591914 CMAHPQ9Y471 501 aa23.49■■□□□ 1.35
SMAD4-213ENST00000591914 CR1P17927 2039 aa23.49■■□□□ 1.35
SMAD4-213ENST00000591914 GPRIN2O60269 458 aa23.48■■□□□ 1.35
SMAD4-213ENST00000591914 LY6HO94772 140 aa23.48■■□□□ 1.35
SMAD4-213ENST00000591914 NDUFB2O95178 105 aa23.48■■□□□ 1.35
SMAD4-213ENST00000591914 HOXB4P17483 251 aaPredicted RBP23.48■■□□□ 1.35
SMAD4-213ENST00000591914 GALK2Q01415 458 aa23.48■■□□□ 1.35
SMAD4-213ENST00000591914 SPIBQ01892 262 aa23.48■■□□□ 1.35
SMAD4-213ENST00000591914 MSMPQ1L6U9 139 aa23.48■■□□□ 1.35
SMAD4-213ENST00000591914 FAM27BQ5VT28 67 aa23.48■■□□□ 1.35
SMAD4-213ENST00000591914 FOXL2NBQ6ZUU3 175 aa23.48■■□□□ 1.35
SMAD4-213ENST00000591914 MAPK1IP1LQ8NDC0 245 aa23.48■■□□□ 1.35
SMAD4-213ENST00000591914 RSRC1Q96IZ7 334 aaKnown RBP23.48■■□□□ 1.35
SMAD4-213ENST00000591914 Q96M85 177 aa23.48■■□□□ 1.35
SMAD4-213ENST00000591914 GPA33Q99795 319 aa23.48■■□□□ 1.35
SMAD4-213ENST00000591914 SLC7A8Q9UHI5 535 aa23.48■■□□□ 1.35
SMAD4-213ENST00000591914 FKBP7Q9Y680 259 aa23.48■■□□□ 1.35
SMAD4-213ENST00000591914 PTHP01270 115 aa23.47■■□□□ 1.35
SMAD4-213ENST00000591914 CSF3P09919 207 aa23.47■■□□□ 1.35
SMAD4-213ENST00000591914 ATP6V1B2P21281 511 aa23.47■■□□□ 1.35
SMAD4-213ENST00000591914 FXYD6P3P58550 94 aa23.47■■□□□ 1.35
SMAD4-213ENST00000591914 KRTAP1-1Q07627 177 aa23.47■■□□□ 1.35
SMAD4-213ENST00000591914 SGCAQ16586 387 aa23.47■■□□□ 1.35
SMAD4-213ENST00000591914 MESTQ5EB52 335 aa23.47■■□□□ 1.35
SMAD4-213ENST00000591914 CYP2R1Q6VVX0 501 aa23.47■■□□□ 1.35
SMAD4-213ENST00000591914 RINLQ6ZS11 566 aa23.47■■□□□ 1.35
SMAD4-213ENST00000591914 MRPL24Q96A35 216 aaKnown RBP23.47■■□□□ 1.35
SMAD4-213ENST00000591914 POM121Q96HA1 1249 aa23.47■■□□□ 1.35
SMAD4-213ENST00000591914 VRK1Q99986 396 aaPredicted RBP23.47■■□□□ 1.35
SMAD4-213ENST00000591914 KCNN2Q9H2S1 579 aa23.47■■□□□ 1.35
SMAD4-213ENST00000591914 NRIP3Q9NQ35 241 aa23.47■■□□□ 1.35
SMAD4-213ENST00000591914 AURKCQ9UQB9 309 aa23.47■■□□□ 1.35
SMAD4-213ENST00000591914 A0A096LNT2 108 aa23.46■■□□□ 1.35
SMAD4-213ENST00000591914 SLC22A23A1A5C7 686 aa23.46■■□□□ 1.35
SMAD4-213ENST00000591914 UNC119BA6NIH7 251 aa23.46■■□□□ 1.35
SMAD4-213ENST00000591914 AHCYL1O43865 530 aa23.46■■□□□ 1.35
SMAD4-213ENST00000591914 SNAP29O95721 258 aa23.46■■□□□ 1.35
SMAD4-213ENST00000591914 EVX1P49640 407 aa23.46■■□□□ 1.35
SMAD4-213ENST00000591914 RPS23P62266 143 aaKnown RBP23.46■■□□□ 1.35
SMAD4-213ENST00000591914 PLP2Q04941 152 aa23.46■■□□□ 1.35
SMAD4-213ENST00000591914 THSD4Q6ZMP0 1018 aa23.46■■□□□ 1.35
SMAD4-213ENST00000591914 ZER1Q7Z7L7 766 aa23.46■■□□□ 1.35
SMAD4-213ENST00000591914 ZDHHC21Q8IVQ6 265 aa23.46■■□□□ 1.35
SMAD4-213ENST00000591914 PAQR4Q8N4S7 273 aaPredicted RBP23.46■■□□□ 1.35
SMAD4-213ENST00000591914 C10orf105Q8TEF2 133 aa23.46■■□□□ 1.35
SMAD4-213ENST00000591914 FAM168AQ92567 244 aa23.46■■□□□ 1.35
SMAD4-213ENST00000591914 ZNF570Q96NI8 536 aa23.46■■□□□ 1.35
SMAD4-213ENST00000591914 MRPL37Q9BZE1 423 aaKnown RBP23.46■■□□□ 1.35
SMAD4-213ENST00000591914 MUC13Q9H3R2 512 aa23.46■■□□□ 1.35
SMAD4-213ENST00000591914 IQCMA0A1B0GVH7 501 aa23.45■■□□□ 1.34
SMAD4-213ENST00000591914 H7C1C5 153 aa23.45■■□□□ 1.34
SMAD4-213ENST00000591914 XKRYO14609 159 aa23.45■■□□□ 1.34
SMAD4-213ENST00000591914 RRM2P31350 389 aa23.45■■□□□ 1.34
SMAD4-213ENST00000591914 LCN6P62502 163 aa23.45■■□□□ 1.34
SMAD4-213ENST00000591914 MTX3Q5HYI7 312 aa23.45■■□□□ 1.34
SMAD4-213ENST00000591914 PABPC1L2AQ5JQF8 200 aa23.45■■□□□ 1.34
SMAD4-213ENST00000591914 GPR139Q6DWJ6 353 aa23.45■■□□□ 1.34
SMAD4-213ENST00000591914 CCNB1IP1Q9NPC3 277 aa23.45■■□□□ 1.34
SMAD4-213ENST00000591914 FN1P02751 2386 aaKnown RBP23.45■■□□□ 1.34
SMAD4-213ENST00000591914 TEX13CA0A0J9YWL9 993 aa23.44■■□□□ 1.34
SMAD4-213ENST00000591914 PRSS37A4D1T9 235 aa23.44■■□□□ 1.34
SMAD4-213ENST00000591914 IGFBP1P08833 259 aaPredicted RBP23.44■■□□□ 1.34
SMAD4-213ENST00000591914 CCL2P13500 99 aa23.44■■□□□ 1.34
SMAD4-213ENST00000591914 ZNF32P17041 273 aa23.44■■□□□ 1.34
SMAD4-213ENST00000591914 SDHAP31040 664 aa23.44■■□□□ 1.34
SMAD4-213ENST00000591914 TBC1D28Q2M2D7 210 aa23.44■■□□□ 1.34
SMAD4-213ENST00000591914 LCN8Q6JVE9 175 aa23.44■■□□□ 1.34
SMAD4-213ENST00000591914 DPY19L2P2Q6ZN68 376 aa23.44■■□□□ 1.34
SMAD4-213ENST00000591914 CPEB3Q8NE35 698 aaKnown RBP23.44■■□□□ 1.34
SMAD4-213ENST00000591914 OR1J2Q8NGS2 313 aa23.44■■□□□ 1.34
SMAD4-213ENST00000591914 RASD2Q96D21 266 aa23.44■■□□□ 1.34
SMAD4-213ENST00000591914 RAB1BQ9H0U4 201 aa23.44■■□□□ 1.34
SMAD4-213ENST00000591914 CDH20Q9HBT6 801 aa23.44■■□□□ 1.34
SMAD4-213ENST00000591914 IL20RAQ9UHF4 553 aa23.44■■□□□ 1.34
SMAD4-213ENST00000591914 PRPF19Q9UMS4 504 aaKnown RBP23.44■■□□□ 1.34
SMAD4-213ENST00000591914 TCRBV5S2A0A599 114 aa23.43■■□□□ 1.34
SMAD4-213ENST00000591914 CST2P09228 141 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms