RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 CACNG2Q9Y698 323 aa15.37■□□□□ 0.05
H3F3B-209ENST00000589949 LOC100509620A0A075B734 347 aa15.36■□□□□ 0.05
H3F3B-209ENST00000589949 FAM220BPB1ANY3 271 aa15.36■□□□□ 0.05
H3F3B-209ENST00000589949 CENPBD1B2RD01 187 aa15.36■□□□□ 0.05
H3F3B-209ENST00000589949 B4DSR2 109 aa15.36■□□□□ 0.05
H3F3B-209ENST00000589949 PPIHO43447 177 aaKnown RBP15.36■□□□□ 0.05
H3F3B-209ENST00000589949 NPPAP01160 153 aa15.36■□□□□ 0.05
H3F3B-209ENST00000589949 ZNF32P17041 273 aa15.36■□□□□ 0.05
H3F3B-209ENST00000589949 MAKP20794 623 aa15.36■□□□□ 0.05
H3F3B-209ENST00000589949 WNT5AP41221 380 aa15.36■□□□□ 0.05
H3F3B-209ENST00000589949 DAP3P51398 398 aaKnown RBP15.36■□□□□ 0.05
H3F3B-209ENST00000589949 ZNF84P51523 738 aa15.36■□□□□ 0.05
H3F3B-209ENST00000589949 TMEM33P57088 247 aa15.36■□□□□ 0.05
H3F3B-209ENST00000589949 MRPS11P82912 194 aaKnown RBP15.36■□□□□ 0.05
H3F3B-209ENST00000589949 GLO1Q04760 184 aa15.36■□□□□ 0.05
H3F3B-209ENST00000589949 HNRNPA0Q13151 305 aaKnown RBP15.36■□□□□ 0.05
H3F3B-209ENST00000589949 TBC1D28Q2M2D7 210 aa15.36■□□□□ 0.05
H3F3B-209ENST00000589949 MMEL1Q495T6 779 aa15.36■□□□□ 0.05
H3F3B-209ENST00000589949 LRRC23Q53EV4 343 aaPredicted RBP15.36■□□□□ 0.05
H3F3B-209ENST00000589949 ERICH5Q6P6B1 374 aa15.36■□□□□ 0.05
H3F3B-209ENST00000589949 SLC25A47Q6Q0C1 308 aa15.36■□□□□ 0.05
H3F3B-209ENST00000589949 DPPA2Q7Z7J5 298 aa15.36■□□□□ 0.05
H3F3B-209ENST00000589949 IGFN1Q86VF2 1251 aa15.36■□□□□ 0.05
H3F3B-209ENST00000589949 LRRC75AQ8NAA5 344 aa15.36■□□□□ 0.05
H3F3B-209ENST00000589949 AKR7LQ8NHP1 331 aa15.36■□□□□ 0.05
H3F3B-209ENST00000589949 TPD52L3Q96J77 140 aa15.36■□□□□ 0.05
H3F3B-209ENST00000589949 POM121L2Q96KW2 1035 aa15.36■□□□□ 0.05
H3F3B-209ENST00000589949 POLR2J2Q9GZM3 115 aaKnown RBP15.36■□□□□ 0.05
H3F3B-209ENST00000589949 POLR2J3Q9H1A7 115 aaKnown RBP15.36■□□□□ 0.05
H3F3B-209ENST00000589949 SIAEQ9HAT2 523 aa15.36■□□□□ 0.05
H3F3B-209ENST00000589949 MAN2C1Q9NTJ4 1040 aa15.36■□□□□ 0.05
H3F3B-209ENST00000589949 CMTM6Q9NX76 183 aa15.36■□□□□ 0.05
H3F3B-209ENST00000589949 ZNF346Q9UL40 294 aaKnown RBP15.36■□□□□ 0.05
H3F3B-209ENST00000589949 MED31Q9Y3C7 131 aa15.36■□□□□ 0.05
H3F3B-209ENST00000589949 SLC22A23A1A5C7 686 aa15.35■□□□□ 0.05
H3F3B-209ENST00000589949 J3KTA2 159 aa15.35■□□□□ 0.05
H3F3B-209ENST00000589949 FFAR1O14842 300 aa15.35■□□□□ 0.05
H3F3B-209ENST00000589949 ENTPD5O75356 428 aa15.35■□□□□ 0.05
H3F3B-209ENST00000589949 GAAP10253 952 aa15.35■□□□□ 0.05
H3F3B-209ENST00000589949 THRBP10828 461 aa15.35■□□□□ 0.05
H3F3B-209ENST00000589949 ITGA2P17301 1181 aa15.35■□□□□ 0.05
H3F3B-209ENST00000589949 SRP14P37108 136 aaKnown RBP15.35■□□□□ 0.05
H3F3B-209ENST00000589949 MPV17P39210 176 aa15.35■□□□□ 0.05
H3F3B-209ENST00000589949 YAP1P46937 504 aaKnown RBP15.35■□□□□ 0.05
H3F3B-209ENST00000589949 ARFIP2P53365 341 aa15.35■□□□□ 0.05
H3F3B-209ENST00000589949 TOP3AQ13472 1001 aaPredicted RBP15.35■□□□□ 0.05
H3F3B-209ENST00000589949 SPATA46Q5T0L3 261 aa15.35■□□□□ 0.05
H3F3B-209ENST00000589949 AVPI1Q5T686 147 aa15.35■□□□□ 0.05
H3F3B-209ENST00000589949 VTCN1Q7Z7D3 282 aa15.35■□□□□ 0.05
H3F3B-209ENST00000589949 ICA1LQ8NDH6 482 aa15.35■□□□□ 0.05
H3F3B-209ENST00000589949 C11orf40Q8WZ69 217 aa15.35■□□□□ 0.05
H3F3B-209ENST00000589949 TXNIPQ9H3M7 391 aa15.35■□□□□ 0.05
H3F3B-209ENST00000589949 HIF1ANQ9NWT6 349 aa15.35■□□□□ 0.05
H3F3B-209ENST00000589949 RHCGQ9UBD6 479 aa15.35■□□□□ 0.05
H3F3B-209ENST00000589949 HIF3AQ9Y2N7 669 aa15.35■□□□□ 0.05
H3F3B-209ENST00000589949 ANK2Q01484 3957 aa15.35■□□□□ 0.05
H3F3B-209ENST00000589949 IQCMA0A1B0GVH7 501 aa15.34■□□□□ 0.05
H3F3B-209ENST00000589949 NPIPB13A6NJU9 1138 aa15.34■□□□□ 0.05
H3F3B-209ENST00000589949 BBIP1A8MTZ0 92 aa15.34■□□□□ 0.05
H3F3B-209ENST00000589949 NPIPB4C9JG80 1138 aa15.34■□□□□ 0.05
H3F3B-209ENST00000589949 SCG5P05408 212 aa15.34■□□□□ 0.05
H3F3B-209ENST00000589949 MSMBP08118 114 aa15.34■□□□□ 0.05
H3F3B-209ENST00000589949 VIMP08670 466 aaKnown RBP15.34■□□□□ 0.05
H3F3B-209ENST00000589949 CCNOP22674 350 aa15.34■□□□□ 0.05
H3F3B-209ENST00000589949 STOMP27105 288 aa15.34■□□□□ 0.05
H3F3B-209ENST00000589949 RBMXP38159 391 aaKnown RBP15.34■□□□□ 0.05
H3F3B-209ENST00000589949 RAD52P43351 418 aa15.34■□□□□ 0.05
H3F3B-209ENST00000589949 ERVK-25P63136 954 aa15.34■□□□□ 0.05
H3F3B-209ENST00000589949 SELENOWP63302 87 aa15.34■□□□□ 0.05
H3F3B-209ENST00000589949 PSG4Q00888 419 aa15.34■□□□□ 0.05
H3F3B-209ENST00000589949 PLP2Q04941 152 aa15.34■□□□□ 0.05
H3F3B-209ENST00000589949 CD47Q08722 323 aa15.34■□□□□ 0.05
H3F3B-209ENST00000589949 SGCAQ16586 387 aa15.34■□□□□ 0.05
H3F3B-209ENST00000589949 C1orf229Q6ZS94 237 aaPredicted RBP15.34■□□□□ 0.05
H3F3B-209ENST00000589949 GLCCI1Q86VQ1 547 aa15.34■□□□□ 0.05
H3F3B-209ENST00000589949 MICU2Q8IYU8 434 aa15.34■□□□□ 0.05
H3F3B-209ENST00000589949 POU5F2Q8N7G0 328 aa15.34■□□□□ 0.05
H3F3B-209ENST00000589949 OR2T12Q8NG77 320 aa15.34■□□□□ 0.05
H3F3B-209ENST00000589949 OR1J1Q8NGS3 322 aa15.34■□□□□ 0.05
H3F3B-209ENST00000589949 TMEM186Q96B77 213 aa15.34■□□□□ 0.05
H3F3B-209ENST00000589949 RCN3Q96D15 328 aa15.34■□□□□ 0.05
H3F3B-209ENST00000589949 BPIFA2Q96DR5 249 aa15.34■□□□□ 0.05
H3F3B-209ENST00000589949 C1orf198Q9H425 327 aa15.34■□□□□ 0.05
H3F3B-209ENST00000589949 SMURF2Q9HAU4 748 aa15.34■□□□□ 0.05
H3F3B-209ENST00000589949 ARMCX1Q9P291 453 aa15.34■□□□□ 0.05
H3F3B-209ENST00000589949 TRAV27A0A087WT01 109 aa15.33■□□□□ 0.04
H3F3B-209ENST00000589949 AVPP01185 164 aa15.33■□□□□ 0.04
H3F3B-209ENST00000589949 PTHP01270 115 aa15.33■□□□□ 0.04
H3F3B-209ENST00000589949 IFNA14P01570 189 aa15.33■□□□□ 0.04
H3F3B-209ENST00000589949 IGHV3-13P01766 116 aa15.33■□□□□ 0.04
H3F3B-209ENST00000589949 TROVE2P10155 538 aaKnown RBP eCLIP15.33■□□□□ 0.04
H3F3B-209ENST00000589949 IFI30P13284 250 aa15.33■□□□□ 0.04
H3F3B-209ENST00000589949 ZNF26P17031 533 aaPredicted RBP15.33■□□□□ 0.04
H3F3B-209ENST00000589949 APLNRP35414 380 aa15.33■□□□□ 0.04
H3F3B-209ENST00000589949 MVKQ03426 396 aa15.33■□□□□ 0.04
H3F3B-209ENST00000589949 HSF2Q03933 536 aa15.33■□□□□ 0.04
H3F3B-209ENST00000589949 SPRNQ5BIV9 151 aa15.33■□□□□ 0.04
H3F3B-209ENST00000589949 ALG10Q5BKT4 473 aa15.33■□□□□ 0.04
H3F3B-209ENST00000589949 THEM4Q5T1C6 240 aa15.33■□□□□ 0.04
H3F3B-209ENST00000589949 FAM27BQ5VT28 67 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms