RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 OR2T4Q8NH00 348 aa17.15■□□□□ 0.34
CIRBP-220ENST00000588917 NSMAFQ92636 917 aa17.15■□□□□ 0.34
CIRBP-220ENST00000588917 SLC29A1Q99808 456 aa17.15■□□□□ 0.34
CIRBP-220ENST00000588917 WACQ9BTA9 647 aa17.15■□□□□ 0.34
CIRBP-220ENST00000588917 VCXQ9H320 206 aa17.15■□□□□ 0.34
CIRBP-220ENST00000588917 RIBC2Q9H4K1 309 aa17.15■□□□□ 0.34
CIRBP-220ENST00000588917 SEC61A2Q9H9S3 476 aa17.15■□□□□ 0.34
CIRBP-220ENST00000588917 B9D1Q9UPM9 204 aa17.15■□□□□ 0.34
CIRBP-220ENST00000588917 HCFC1P51610 2035 aa17.14■□□□□ 0.34
CIRBP-220ENST00000588917 A0A096LPE4 126 aa17.14■□□□□ 0.33
CIRBP-220ENST00000588917 ARPC4-TTLL3A0A0A6YYG9 625 aa17.14■□□□□ 0.33
CIRBP-220ENST00000588917 A0A1W2PPZ6 126 aa17.14■□□□□ 0.33
CIRBP-220ENST00000588917 OR6C68A6NDL8 312 aa17.14■□□□□ 0.33
CIRBP-220ENST00000588917 ZAR1LA6NP61 321 aa17.14■□□□□ 0.33
CIRBP-220ENST00000588917 SURF4O15260 269 aa17.14■□□□□ 0.33
CIRBP-220ENST00000588917 LAP3P28838 519 aa17.14■□□□□ 0.33
CIRBP-220ENST00000588917 BLVRAP53004 296 aa17.14■□□□□ 0.33
CIRBP-220ENST00000588917 DAZAP2Q15038 168 aaPredicted RBP17.14■□□□□ 0.33
CIRBP-220ENST00000588917 TAB1Q15750 504 aa17.14■□□□□ 0.33
CIRBP-220ENST00000588917 SNAPC1Q16533 368 aa17.14■□□□□ 0.33
CIRBP-220ENST00000588917 HIKESHIQ53FT3 197 aa17.14■□□□□ 0.33
CIRBP-220ENST00000588917 SLX4IPQ5VYV7 408 aa17.14■□□□□ 0.33
CIRBP-220ENST00000588917 TMEM236Q5W0B7 351 aa17.14■□□□□ 0.33
CIRBP-220ENST00000588917 ZBTB46Q86UZ6 589 aa17.14■□□□□ 0.33
CIRBP-220ENST00000588917 IQCF1Q8N6M8 205 aa17.14■□□□□ 0.33
CIRBP-220ENST00000588917 DDOQ99489 341 aa17.14■□□□□ 0.33
CIRBP-220ENST00000588917 NELFAQ9H3P2 528 aa17.14■□□□□ 0.33
CIRBP-220ENST00000588917 RERGLQ9H628 205 aa17.14■□□□□ 0.33
CIRBP-220ENST00000588917 RPRD1BQ9NQG5 326 aaKnown RBP17.14■□□□□ 0.33
CIRBP-220ENST00000588917 TVP23BQ9NYZ1 205 aa17.14■□□□□ 0.33
CIRBP-220ENST00000588917 CRIM1Q9NZV1 1036 aa17.14■□□□□ 0.33
CIRBP-220ENST00000588917 SLC25A15Q9Y619 301 aa17.14■□□□□ 0.33
CIRBP-220ENST00000588917 PRR23D1E9PI22 279 aaPredicted RBP17.13■□□□□ 0.33
CIRBP-220ENST00000588917 PRR23D2P0DMB1 279 aaPredicted RBP17.13■□□□□ 0.33
CIRBP-220ENST00000588917 B4GALT1P15291 398 aa17.13■□□□□ 0.33
CIRBP-220ENST00000588917 CTLA4P16410 223 aa17.13■□□□□ 0.33
CIRBP-220ENST00000588917 SLC25A1P53007 311 aa17.13■□□□□ 0.33
CIRBP-220ENST00000588917 GLO1Q04760 184 aa17.13■□□□□ 0.33
CIRBP-220ENST00000588917 SNTB1Q13884 538 aaKnown RBP17.13■□□□□ 0.33
CIRBP-220ENST00000588917 CRMP1Q14194 572 aa17.13■□□□□ 0.33
CIRBP-220ENST00000588917 SGCAQ16586 387 aa17.13■□□□□ 0.33
CIRBP-220ENST00000588917 LRRC36Q1X8D7 754 aa17.13■□□□□ 0.33
CIRBP-220ENST00000588917 SLC36A2Q495M3 483 aa17.13■□□□□ 0.33
CIRBP-220ENST00000588917 OGFRL1Q5TC84 451 aaPredicted RBP17.13■□□□□ 0.33
CIRBP-220ENST00000588917 FAM27BQ5VT28 67 aa17.13■□□□□ 0.33
CIRBP-220ENST00000588917 LPCAT4Q643R3 524 aa17.13■□□□□ 0.33
CIRBP-220ENST00000588917 FOXL2NBQ6ZUU3 175 aa17.13■□□□□ 0.33
CIRBP-220ENST00000588917 OR6V1Q8N148 313 aa17.13■□□□□ 0.33
CIRBP-220ENST00000588917 FAM169BQ8N8A8 192 aa17.13■□□□□ 0.33
CIRBP-220ENST00000588917 WDR31Q8NA23 367 aa17.13■□□□□ 0.33
CIRBP-220ENST00000588917 OR52N5Q8NH56 324 aa17.13■□□□□ 0.33
CIRBP-220ENST00000588917 RACGAP1Q9H0H5 632 aa17.13■□□□□ 0.33
CIRBP-220ENST00000588917 FN3KQ9H479 309 aa17.13■□□□□ 0.33
CIRBP-220ENST00000588917 COA3Q9Y2R0 106 aaPredicted RBP17.13■□□□□ 0.33
CIRBP-220ENST00000588917 RRP15Q9Y3B9 282 aaKnown RBP17.13■□□□□ 0.33
CIRBP-220ENST00000588917 UGT2A1Q9Y4X1 527 aa17.13■□□□□ 0.33
CIRBP-220ENST00000588917 IGKV1D-43A0A0B4J1Z2 117 aa17.12■□□□□ 0.33
CIRBP-220ENST00000588917 A0A1W2PPL8 197 aa17.12■□□□□ 0.33
CIRBP-220ENST00000588917 UBL3O95164 117 aa17.12■□□□□ 0.33
CIRBP-220ENST00000588917 CRYGSP22914 178 aa17.12■□□□□ 0.33
CIRBP-220ENST00000588917 CAPZA2P47755 286 aa17.12■□□□□ 0.33
CIRBP-220ENST00000588917 CDC42P60953 191 aa17.12■□□□□ 0.33
CIRBP-220ENST00000588917 PCBD1P61457 104 aa17.12■□□□□ 0.33
CIRBP-220ENST00000588917 SLC16A14Q7RTX9 510 aa17.12■□□□□ 0.33
CIRBP-220ENST00000588917 TRUB1Q8WWH5 349 aaKnown RBP17.12■□□□□ 0.33
CIRBP-220ENST00000588917 ZC3HAV1LQ96H79 300 aaKnown RBP17.12■□□□□ 0.33
CIRBP-220ENST00000588917 GRIP2Q9C0E4 1043 aa17.12■□□□□ 0.33
CIRBP-220ENST00000588917 VCX3BQ9H321 246 aa17.12■□□□□ 0.33
CIRBP-220ENST00000588917 SMPD3Q9NY59 655 aaPredicted RBP17.12■□□□□ 0.33
CIRBP-220ENST00000588917 FBXL3Q9UKT7 428 aa17.12■□□□□ 0.33
CIRBP-220ENST00000588917 MOKQ9UQ07 419 aa17.12■□□□□ 0.33
CIRBP-220ENST00000588917 TEP1Q99973 2627 aaKnown RBP17.11■□□□□ 0.33
CIRBP-220ENST00000588917 THBDP07204 575 aa17.11■□□□□ 0.33
CIRBP-220ENST00000588917 MSR1P21757 451 aa17.11■□□□□ 0.33
CIRBP-220ENST00000588917 ARR3P36575 388 aa17.11■□□□□ 0.33
CIRBP-220ENST00000588917 POLR2IP36954 125 aaKnown RBP17.11■□□□□ 0.33
CIRBP-220ENST00000588917 PTDSS1P48651 473 aaKnown RBP17.11■□□□□ 0.33
CIRBP-220ENST00000588917 LSM6P62312 80 aaKnown RBP17.11■□□□□ 0.33
CIRBP-220ENST00000588917 ETFDHQ16134 617 aa17.11■□□□□ 0.33
CIRBP-220ENST00000588917 KCNMB1Q16558 191 aa17.11■□□□□ 0.33
CIRBP-220ENST00000588917 C3orf36Q3SXR2 165 aa17.11■□□□□ 0.33
CIRBP-220ENST00000588917 ZIK1Q3SY52 487 aaPredicted RBP17.11■□□□□ 0.33
CIRBP-220ENST00000588917 C12orf73Q69YU5 71 aa17.11■□□□□ 0.33
CIRBP-220ENST00000588917 SYT9Q86SS6 491 aa17.11■□□□□ 0.33
CIRBP-220ENST00000588917 WFDC8Q8IUA0 241 aa17.11■□□□□ 0.33
CIRBP-220ENST00000588917 SKA3Q8IX90 412 aa17.11■□□□□ 0.33
CIRBP-220ENST00000588917 GALNT4Q8N4A0 578 aa17.11■□□□□ 0.33
CIRBP-220ENST00000588917 CYB561A3Q8NBI2 242 aa17.11■□□□□ 0.33
CIRBP-220ENST00000588917 ZNF555Q8NEP9 628 aa17.11■□□□□ 0.33
CIRBP-220ENST00000588917 PROKR2Q8NFJ6 384 aa17.11■□□□□ 0.33
CIRBP-220ENST00000588917 HRASLS5Q96KN8 279 aa17.11■□□□□ 0.33
CIRBP-220ENST00000588917 TSSK2Q96PF2 358 aa17.11■□□□□ 0.33
CIRBP-220ENST00000588917 NMNAT2Q9BZQ4 307 aa17.11■□□□□ 0.33
CIRBP-220ENST00000588917 TOR3AQ9H497 397 aa17.11■□□□□ 0.33
CIRBP-220ENST00000588917 ESRP2Q9H6T0 727 aaKnown RBP17.11■□□□□ 0.33
CIRBP-220ENST00000588917 NKX1-2Q9UD57 310 aaPredicted RBP17.11■□□□□ 0.33
CIRBP-220ENST00000588917 FREM1Q5H8C1 2179 aa17.11■□□□□ 0.33
CIRBP-220ENST00000588917 OTOGQ6ZRI0 2925 aa17.1■□□□□ 0.33
CIRBP-220ENST00000588917 IGLV1-36A0A0B4J1U3 117 aa17.1■□□□□ 0.33
CIRBP-220ENST00000588917 C12orf71A8MTZ7 269 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms