RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, human

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC1-206	ENST00000588300	NR2C1	P13056	603 aa		13.58	□□□□□ -0.24
ERCC1-206	ENST00000588300	AQP2	P41181	271 aa		13.58	□□□□□ -0.24
ERCC1-206	ENST00000588300	MRPS34	P82930	218 aa	Known RBP	13.58	□□□□□ -0.24
ERCC1-206	ENST00000588300	MVK	Q03426	396 aa		13.58	□□□□□ -0.24
ERCC1-206	ENST00000588300	CYLC2	Q14093	348 aa	Predicted RBP	13.58	□□□□□ -0.24
ERCC1-206	ENST00000588300	PABPC1L2A	Q5JQF8	200 aa		13.58	□□□□□ -0.24
ERCC1-206	ENST00000588300	AVPI1	Q5T686	147 aa		13.58	□□□□□ -0.24
ERCC1-206	ENST00000588300	NANOGP8	Q6NSW7	305 aa		13.58	□□□□□ -0.24
ERCC1-206	ENST00000588300	ACSM5	Q6NUN0	579 aa		13.58	□□□□□ -0.24
ERCC1-206	ENST00000588300	THSD4	Q6ZMP0	1018 aa		13.58	□□□□□ -0.24
ERCC1-206	ENST00000588300	NKAIN4	Q8IVV8	208 aa		13.58	□□□□□ -0.24
ERCC1-206	ENST00000588300	OR1J1	Q8NGS3	322 aa		13.58	□□□□□ -0.24
ERCC1-206	ENST00000588300	TMEM255B	Q8WV15	326 aa		13.58	□□□□□ -0.24
ERCC1-206	ENST00000588300	TMEM239	Q8WW34	195 aa		13.58	□□□□□ -0.24
ERCC1-206	ENST00000588300	SH3GL1	Q99961	368 aa		13.58	□□□□□ -0.24
ERCC1-206	ENST00000588300	SIKE1	Q9BRV8	207 aa		13.58	□□□□□ -0.24
ERCC1-206	ENST00000588300	SIAE	Q9HAT2	523 aa		13.58	□□□□□ -0.24
ERCC1-206	ENST00000588300	SMURF2	Q9HAU4	748 aa		13.58	□□□□□ -0.24
ERCC1-206	ENST00000588300	NPHS2	Q9NP85	383 aa		13.58	□□□□□ -0.24
ERCC1-206	ENST00000588300	CCNB1IP1	Q9NPC3	277 aa		13.58	□□□□□ -0.24
ERCC1-206	ENST00000588300		A0A0G2JND7	137 aa		13.57	□□□□□ -0.24
ERCC1-206	ENST00000588300	HMGB1P1	B2RPK0	211 aa	Predicted RBP	13.57	□□□□□ -0.24
ERCC1-206	ENST00000588300	CLDN25	C9JDP6	229 aa		13.57	□□□□□ -0.24
ERCC1-206	ENST00000588300	SLC2A10	O95528	541 aa		13.57	□□□□□ -0.24
ERCC1-206	ENST00000588300	IGHV3-13	P01766	116 aa		13.57	□□□□□ -0.24
ERCC1-206	ENST00000588300	CCNO	P22674	350 aa		13.57	□□□□□ -0.24
ERCC1-206	ENST00000588300	STOM	P27105	288 aa		13.57	□□□□□ -0.24
ERCC1-206	ENST00000588300	GLO1	Q04760	184 aa		13.57	□□□□□ -0.24
ERCC1-206	ENST00000588300	HFE	Q30201	348 aa		13.57	□□□□□ -0.24
ERCC1-206	ENST00000588300	METTL21C	Q5VZV1	264 aa		13.57	□□□□□ -0.24
ERCC1-206	ENST00000588300	USP51	Q70EK9	711 aa		13.57	□□□□□ -0.24
ERCC1-206	ENST00000588300	CPEB3	Q8NE35	698 aa	Known RBP	13.57	□□□□□ -0.24
ERCC1-206	ENST00000588300	LIPH	Q8WWY8	451 aa		13.57	□□□□□ -0.24
ERCC1-206	ENST00000588300	TIMD4	Q96H15	378 aa		13.57	□□□□□ -0.24
ERCC1-206	ENST00000588300	ECSIT	Q9BQ95	431 aa		13.57	□□□□□ -0.24
ERCC1-206	ENST00000588300	SAP30L	Q9HAJ7	183 aa		13.57	□□□□□ -0.24
ERCC1-206	ENST00000588300	G6PC2	Q9NQR9	355 aa		13.57	□□□□□ -0.24
ERCC1-206	ENST00000588300	C20orf141	Q9NUB4	165 aa		13.57	□□□□□ -0.24
ERCC1-206	ENST00000588300	RIMS3	Q9UJD0	308 aa		13.57	□□□□□ -0.24
ERCC1-206	ENST00000588300	GMNC	A6NCL1	334 aa		13.56	□□□□□ -0.24
ERCC1-206	ENST00000588300	NPIPB13	A6NJU9	1138 aa		13.56	□□□□□ -0.24
ERCC1-206	ENST00000588300	NPIPB4	C9JG80	1138 aa		13.56	□□□□□ -0.24
ERCC1-206	ENST00000588300	FBP2	O00757	339 aa		13.56	□□□□□ -0.24
ERCC1-206	ENST00000588300	EDF1	O60869	148 aa	Known RBP	13.56	□□□□□ -0.24
ERCC1-206	ENST00000588300	MPZL1	O95297	269 aa		13.56	□□□□□ -0.24
ERCC1-206	ENST00000588300	TSPAN19	P0C672	248 aa		13.56	□□□□□ -0.24
ERCC1-206	ENST00000588300	ZNF32	P17041	273 aa		13.56	□□□□□ -0.24
ERCC1-206	ENST00000588300	TNFRSF1B	P20333	461 aa		13.56	□□□□□ -0.24
ERCC1-206	ENST00000588300	GCH1	P30793	250 aa		13.56	□□□□□ -0.24
ERCC1-206	ENST00000588300	CDA	P32320	146 aa		13.56	□□□□□ -0.24
ERCC1-206	ENST00000588300	ZNF81	P51508	661 aa		13.56	□□□□□ -0.24
ERCC1-206	ENST00000588300	ACTG1	P63261	375 aa		13.56	□□□□□ -0.24
ERCC1-206	ENST00000588300	CD47	Q08722	323 aa		13.56	□□□□□ -0.24
ERCC1-206	ENST00000588300	PIN1	Q13526	163 aa	Predicted RBP	13.56	□□□□□ -0.24
ERCC1-206	ENST00000588300	TST	Q16762	297 aa	Known RBP	13.56	□□□□□ -0.24
ERCC1-206	ENST00000588300	ZNF718	Q3SXZ3	478 aa		13.56	□□□□□ -0.24
ERCC1-206	ENST00000588300	RABL3	Q5HYI8	236 aa		13.56	□□□□□ -0.24
ERCC1-206	ENST00000588300	FAM209A	Q5JX71	171 aa		13.56	□□□□□ -0.24
ERCC1-206	ENST00000588300	ARMC4	Q5T2S8	1044 aa		13.56	□□□□□ -0.24
ERCC1-206	ENST00000588300	UNQ6126/PRO20091	Q6UXV3	157 aa		13.56	□□□□□ -0.24
ERCC1-206	ENST00000588300	CALHM3	Q86XJ0	350 aa		13.56	□□□□□ -0.24
ERCC1-206	ENST00000588300	OR8J3	Q8NGG0	315 aa		13.56	□□□□□ -0.24
ERCC1-206	ENST00000588300	MOSPD2	Q8NHP6	518 aa		13.56	□□□□□ -0.24
ERCC1-206	ENST00000588300	GTF3A	Q92664	365 aa	Known RBP	13.56	□□□□□ -0.24
ERCC1-206	ENST00000588300	NABP1	Q96AH0	204 aa		13.56	□□□□□ -0.24
ERCC1-206	ENST00000588300	ELMOD3	Q96FG2	381 aa		13.56	□□□□□ -0.24
ERCC1-206	ENST00000588300	EIF3K	Q9UBQ5	218 aa	Known RBP	13.56	□□□□□ -0.24
ERCC1-206	ENST00000588300	MED31	Q9Y3C7	131 aa		13.56	□□□□□ -0.24
ERCC1-206	ENST00000588300	WIPI2	Q9Y4P8	454 aa		13.56	□□□□□ -0.24
ERCC1-206	ENST00000588300	UGT2A1	Q9Y4X1	527 aa		13.56	□□□□□ -0.24
ERCC1-206	ENST00000588300		A0A0G2JMP0	313 aa		13.55	□□□□□ -0.24
ERCC1-206	ENST00000588300		A0A0X1KG70	313 aa		13.55	□□□□□ -0.24
ERCC1-206	ENST00000588300	SHOX2	O60902	331 aa	Predicted RBP	13.55	□□□□□ -0.24
ERCC1-206	ENST00000588300	DEAF1	O75398	565 aa	Predicted RBP	13.55	□□□□□ -0.24
ERCC1-206	ENST00000588300	IFNA14	P01570	189 aa		13.55	□□□□□ -0.24
ERCC1-206	ENST00000588300	THRB	P10828	461 aa		13.55	□□□□□ -0.24
ERCC1-206	ENST00000588300	EPHA1	P21709	976 aa		13.55	□□□□□ -0.24
ERCC1-206	ENST00000588300	CFP	P27918	469 aa		13.55	□□□□□ -0.24
ERCC1-206	ENST00000588300	GDI2	P50395	445 aa	Known RBP	13.55	□□□□□ -0.24
ERCC1-206	ENST00000588300	FMOD	Q06828	376 aa		13.55	□□□□□ -0.24
ERCC1-206	ENST00000588300	TAF11	Q15544	211 aa		13.55	□□□□□ -0.24
ERCC1-206	ENST00000588300	SGCA	Q16586	387 aa		13.55	□□□□□ -0.24
ERCC1-206	ENST00000588300	ERICH5	Q6P6B1	374 aa		13.55	□□□□□ -0.24
ERCC1-206	ENST00000588300	USP43	Q70EL4	1123 aa		13.55	□□□□□ -0.24
ERCC1-206	ENST00000588300	ZNF101	Q8IZC7	436 aa		13.55	□□□□□ -0.24
ERCC1-206	ENST00000588300	OR4M2	Q8NGB6	313 aa		13.55	□□□□□ -0.24
ERCC1-206	ENST00000588300	NSMAF	Q92636	917 aa		13.55	□□□□□ -0.24
ERCC1-206	ENST00000588300	HDAC2	Q92769	488 aa	Known RBP	13.55	□□□□□ -0.24
ERCC1-206	ENST00000588300	RAB1C	Q92928	201 aa		13.55	□□□□□ -0.24
ERCC1-206	ENST00000588300	LRRC58	Q96CX6	371 aa		13.55	□□□□□ -0.24
ERCC1-206	ENST00000588300	NMD3	Q96D46	503 aa	Known RBP	13.55	□□□□□ -0.24
ERCC1-206	ENST00000588300	POM121L2	Q96KW2	1035 aa		13.55	□□□□□ -0.24
ERCC1-206	ENST00000588300	TXNIP	Q9H3M7	391 aa		13.55	□□□□□ -0.24
ERCC1-206	ENST00000588300	PCDHB10	Q9UN67	800 aa		13.55	□□□□□ -0.24
ERCC1-206	ENST00000588300	LOC105371242	A0A075B767	164 aa		13.54	□□□□□ -0.24
ERCC1-206	ENST00000588300	IGKV1D-43	A0A0B4J1Z2	117 aa		13.54	□□□□□ -0.24
ERCC1-206	ENST00000588300	PLSCR5	A0PG75	271 aa		13.54	□□□□□ -0.24
ERCC1-206	ENST00000588300	C5orf49	A4QMS7	147 aa		13.54	□□□□□ -0.24
ERCC1-206	ENST00000588300	FXYD1	O00168	92 aa		13.54	□□□□□ -0.24
ERCC1-206	ENST00000588300	PLPP2	O43688	288 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms