RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 GAL3ST1Q99999 423 aa14.31□□□□□ -0.12
LINC01842-201ENST00000588275 TMPRSS13Q9BYE2 586 aa14.31□□□□□ -0.12
LINC01842-201ENST00000588275 MEPEQ9NQ76 525 aaPredicted RBP14.31□□□□□ -0.12
LINC01842-201ENST00000588275 NKIRAS2Q9NYR9 191 aa14.31□□□□□ -0.12
LINC01842-201ENST00000588275 DEAF1O75398 565 aaPredicted RBP14.3□□□□□ -0.12
LINC01842-201ENST00000588275 TRMUO75648 421 aaKnown RBP14.3□□□□□ -0.12
LINC01842-201ENST00000588275 IGHV2-5P01817 119 aa14.3□□□□□ -0.12
LINC01842-201ENST00000588275 MMP7P09237 267 aaPredicted RBP14.3□□□□□ -0.12
LINC01842-201ENST00000588275 ACADSP16219 412 aa14.3□□□□□ -0.12
LINC01842-201ENST00000588275 FUT1P19526 365 aa14.3□□□□□ -0.12
LINC01842-201ENST00000588275 MAKP20794 623 aa14.3□□□□□ -0.12
LINC01842-201ENST00000588275 STOMP27105 288 aa14.3□□□□□ -0.12
LINC01842-201ENST00000588275 PCGF2P35227 344 aa14.3□□□□□ -0.12
LINC01842-201ENST00000588275 AQP2P41181 271 aa14.3□□□□□ -0.12
LINC01842-201ENST00000588275 DAP3P51398 398 aaKnown RBP14.3□□□□□ -0.12
LINC01842-201ENST00000588275 UGT2B15P54855 530 aa14.3□□□□□ -0.12
LINC01842-201ENST00000588275 TAS2R41P59536 307 aa14.3□□□□□ -0.12
LINC01842-201ENST00000588275 NRN1LQ496H8 165 aa14.3□□□□□ -0.12
LINC01842-201ENST00000588275 INTS11Q5TA45 600 aaKnown RBP14.3□□□□□ -0.12
LINC01842-201ENST00000588275 AGBL2Q5U5Z8 902 aa14.3□□□□□ -0.12
LINC01842-201ENST00000588275 HDDC2Q7Z4H3 204 aa14.3□□□□□ -0.12
LINC01842-201ENST00000588275 C1QL2Q7Z5L3 287 aa14.3□□□□□ -0.12
LINC01842-201ENST00000588275 SLC30A8Q8IWU4 369 aa14.3□□□□□ -0.12
LINC01842-201ENST00000588275 BPIFB2Q8N4F0 458 aa14.3□□□□□ -0.12
LINC01842-201ENST00000588275 CPEB3Q8NE35 698 aaKnown RBP14.3□□□□□ -0.12
LINC01842-201ENST00000588275 FAM216AQ8WUB2 273 aa14.3□□□□□ -0.12
LINC01842-201ENST00000588275 IPCEF1Q8WWN9 437 aaPredicted RBP14.3□□□□□ -0.12
LINC01842-201ENST00000588275 CCL17Q92583 94 aa14.3□□□□□ -0.12
LINC01842-201ENST00000588275 NSMAFQ92636 917 aa14.3□□□□□ -0.12
LINC01842-201ENST00000588275 RAB1CQ92928 201 aa14.3□□□□□ -0.12
LINC01842-201ENST00000588275 ZMYND19Q96E35 227 aaPredicted RBP14.3□□□□□ -0.12
LINC01842-201ENST00000588275 ELMOD3Q96FG2 381 aa14.3□□□□□ -0.12
LINC01842-201ENST00000588275 PRSS27Q9BQR3 290 aa14.3□□□□□ -0.12
LINC01842-201ENST00000588275 ZNF426Q9BUY5 554 aa14.3□□□□□ -0.12
LINC01842-201ENST00000588275 RBM4Q9BWF3 364 aaKnown RBP14.3□□□□□ -0.12
LINC01842-201ENST00000588275 SUCNR1Q9BXA5 334 aa14.3□□□□□ -0.12
LINC01842-201ENST00000588275 INIPQ9NRY2 104 aa14.3□□□□□ -0.12
LINC01842-201ENST00000588275 UBAP1Q9NZ09 502 aa14.3□□□□□ -0.12
LINC01842-201ENST00000588275 PLSCR5A0PG75 271 aa14.29□□□□□ -0.12
LINC01842-201ENST00000588275 C5orf49A4QMS7 147 aa14.29□□□□□ -0.12
LINC01842-201ENST00000588275 SHOX2O60902 331 aaPredicted RBP14.29□□□□□ -0.12
LINC01842-201ENST00000588275 OR7A10O76100 309 aa14.29□□□□□ -0.12
LINC01842-201ENST00000588275 IGHV3-13P01766 116 aa14.29□□□□□ -0.12
LINC01842-201ENST00000588275 MT-ND1P03886 318 aa14.29□□□□□ -0.12
LINC01842-201ENST00000588275 ZNF32P17041 273 aa14.29□□□□□ -0.12
LINC01842-201ENST00000588275 TNFRSF1BP20333 461 aa14.29□□□□□ -0.12
LINC01842-201ENST00000588275 MPV17P39210 176 aa14.29□□□□□ -0.12
LINC01842-201ENST00000588275 FMODQ06828 376 aa14.29□□□□□ -0.12
LINC01842-201ENST00000588275 CD47Q08722 323 aa14.29□□□□□ -0.12
LINC01842-201ENST00000588275 TOP3AQ13472 1001 aaPredicted RBP14.29□□□□□ -0.12
LINC01842-201ENST00000588275 SGCAQ16586 387 aa14.29□□□□□ -0.12
LINC01842-201ENST00000588275 HIST3H3Q16695 136 aa14.29□□□□□ -0.12
LINC01842-201ENST00000588275 ZNF718Q3SXZ3 478 aa14.29□□□□□ -0.12
LINC01842-201ENST00000588275 BEND6Q5SZJ8 279 aaPredicted RBP14.29□□□□□ -0.12
LINC01842-201ENST00000588275 THEM4Q5T1C6 240 aa14.29□□□□□ -0.12
LINC01842-201ENST00000588275 USP43Q70EL4 1123 aa14.29□□□□□ -0.12
LINC01842-201ENST00000588275 NKAIN4Q8IVV8 208 aa14.29□□□□□ -0.12
LINC01842-201ENST00000588275 DPP10Q8N608 796 aa14.29□□□□□ -0.12
LINC01842-201ENST00000588275 AKR7LQ8NHP1 331 aa14.29□□□□□ -0.12
LINC01842-201ENST00000588275 TMEM255BQ8WV15 326 aa14.29□□□□□ -0.12
LINC01842-201ENST00000588275 C22orf15Q8WYQ4 148 aa14.29□□□□□ -0.12
LINC01842-201ENST00000588275 SGTBQ96EQ0 304 aa14.29□□□□□ -0.12
LINC01842-201ENST00000588275 MRPL13Q9BYD1 178 aaKnown RBP14.29□□□□□ -0.12
LINC01842-201ENST00000588275 KAT8Q9H7Z6 458 aaKnown RBP14.29□□□□□ -0.12
LINC01842-201ENST00000588275 NANOGQ9H9S0 305 aa14.29□□□□□ -0.12
LINC01842-201ENST00000588275 EIF3KQ9UBQ5 218 aaKnown RBP14.29□□□□□ -0.12
LINC01842-201ENST00000588275 SH3GLB1Q9Y371 365 aa14.29□□□□□ -0.12
LINC01842-201ENST00000588275 TMEM89A2RUT3 159 aa14.28□□□□□ -0.12
LINC01842-201ENST00000588275 IGHV1-46P01743 117 aa14.28□□□□□ -0.12
LINC01842-201ENST00000588275 WNT5AP41221 380 aa14.28□□□□□ -0.12
LINC01842-201ENST00000588275 COMPP49747 757 aaPredicted RBP14.28□□□□□ -0.12
LINC01842-201ENST00000588275 GDI2P50395 445 aaKnown RBP14.28□□□□□ -0.12
LINC01842-201ENST00000588275 ERVK-25P63136 954 aa14.28□□□□□ -0.12
LINC01842-201ENST00000588275 LCN2P80188 198 aa14.28□□□□□ -0.12
LINC01842-201ENST00000588275 C10orf128Q5T292 105 aa14.28□□□□□ -0.12
LINC01842-201ENST00000588275 ZNF101Q8IZC7 436 aa14.28□□□□□ -0.12
LINC01842-201ENST00000588275 MOSPD2Q8NHP6 518 aa14.28□□□□□ -0.12
LINC01842-201ENST00000588275 NANPQ8TBE9 248 aa14.28□□□□□ -0.12
LINC01842-201ENST00000588275 SLC25A40Q8TBP6 338 aa14.28□□□□□ -0.12
LINC01842-201ENST00000588275 RASSF5Q8WWW0 418 aa14.28□□□□□ -0.12
LINC01842-201ENST00000588275 PCDHAC1Q9H158 963 aa14.28□□□□□ -0.12
LINC01842-201ENST00000588275 SIAEQ9HAT2 523 aa14.28□□□□□ -0.12
LINC01842-201ENST00000588275 C20orf141Q9NUB4 165 aa14.28□□□□□ -0.12
LINC01842-201ENST00000588275 IGKV1D-43A0A0B4J1Z2 117 aa14.27□□□□□ -0.13
LINC01842-201ENST00000588275 CENPBD1B2RD01 187 aa14.27□□□□□ -0.13
LINC01842-201ENST00000588275 J3QLI3 93 aa14.27□□□□□ -0.13
LINC01842-201ENST00000588275 WIPF1O43516 503 aa14.27□□□□□ -0.13
LINC01842-201ENST00000588275 LIMS1P48059 325 aa14.27□□□□□ -0.13
LINC01842-201ENST00000588275 ARFIP2P53365 341 aa14.27□□□□□ -0.13
LINC01842-201ENST00000588275 MRPS34P82930 218 aaKnown RBP14.27□□□□□ -0.13
LINC01842-201ENST00000588275 VMACQ2NL98 169 aa14.27□□□□□ -0.13
LINC01842-201ENST00000588275 FAM209AQ5JX71 171 aa14.27□□□□□ -0.13
LINC01842-201ENST00000588275 ABHD4Q8TB40 342 aa14.27□□□□□ -0.13
LINC01842-201ENST00000588275 TMEM239Q8WW34 195 aa14.27□□□□□ -0.13
LINC01842-201ENST00000588275 HDAC2Q92769 488 aaKnown RBP14.27□□□□□ -0.13
LINC01842-201ENST00000588275 OR2J1Q9GZK6 312 aa14.27□□□□□ -0.13
LINC01842-201ENST00000588275 EGLN1Q9GZT9 426 aa14.27□□□□□ -0.13
LINC01842-201ENST00000588275 C7orf69Q9H7B7 122 aa14.27□□□□□ -0.13
LINC01842-201ENST00000588275 STX18Q9P2W9 335 aaKnown RBP14.27□□□□□ -0.13
LINC01842-201ENST00000588275 ARHGAP32A7KAX9 2087 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms