RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 CLN8Q9UBY8 286 aa3.97□□□□□ -1.77
TUBD1-208ENST00000588009 PIEZO1Q92508 2521 aa3.97□□□□□ -1.77
TUBD1-208ENST00000588009 FMN1Q68DA7 1419 aa3.96□□□□□ -1.77
TUBD1-208ENST00000588009 ABCA6Q8N139 1617 aa3.96□□□□□ -1.78
TUBD1-208ENST00000588009 CICQ96RK0 1608 aaPredicted RBP3.96□□□□□ -1.78
TUBD1-208ENST00000588009 KCNE1BA0A087WTH5 132 aa3.96□□□□□ -1.78
TUBD1-208ENST00000588009 A0A0J9YXY3 114 aa3.96□□□□□ -1.78
TUBD1-208ENST00000588009 TNFSF11O14788 317 aa3.96□□□□□ -1.78
TUBD1-208ENST00000588009 PHOX2AO14813 284 aa3.96□□□□□ -1.78
TUBD1-208ENST00000588009 CLPXO76031 633 aa3.96□□□□□ -1.78
TUBD1-208ENST00000588009 GAS8-AS1O95177 125 aa3.96□□□□□ -1.78
TUBD1-208ENST00000588009 CYTH1Q15438 398 aa3.96□□□□□ -1.78
TUBD1-208ENST00000588009 RFLNAQ6ZTI6 216 aa3.96□□□□□ -1.78
TUBD1-208ENST00000588009 TMEM135Q86UB9 458 aa3.96□□□□□ -1.78
TUBD1-208ENST00000588009 ABCA7Q8IZY2 2146 aa3.96□□□□□ -1.78
TUBD1-208ENST00000588009 C14orf178Q8N769 122 aaPredicted RBP3.96□□□□□ -1.78
TUBD1-208ENST00000588009 ARPC1AQ92747 370 aa3.96□□□□□ -1.78
TUBD1-208ENST00000588009 ZNF707Q96C28 371 aaPredicted RBP3.96□□□□□ -1.78
TUBD1-208ENST00000588009 RPUSD4Q96CM3 377 aaKnown RBP3.96□□□□□ -1.78
TUBD1-208ENST00000588009 FCRL1Q96LA6 429 aa3.96□□□□□ -1.78
TUBD1-208ENST00000588009 SIAEQ9HAT2 523 aa3.96□□□□□ -1.78
TUBD1-208ENST00000588009 PLGRKTQ9HBL7 147 aa3.96□□□□□ -1.78
TUBD1-208ENST00000588009 XCL2Q9UBD3 114 aa3.96□□□□□ -1.78
TUBD1-208ENST00000588009 VSIG4Q9Y279 399 aa3.96□□□□□ -1.78
TUBD1-208ENST00000588009 SLC17A4Q9Y2C5 497 aa3.96□□□□□ -1.78
TUBD1-208ENST00000588009 IQGAP2Q13576 1575 aa3.96□□□□□ -1.78
TUBD1-208ENST00000588009 TRIOBPQ9H2D6 2365 aa3.96□□□□□ -1.78
TUBD1-208ENST00000588009 UNC80Q8N2C7 3258 aa3.96□□□□□ -1.78
TUBD1-208ENST00000588009 TRANK1O15050 2925 aa3.95□□□□□ -1.78
TUBD1-208ENST00000588009 ZFP92A6NM28 416 aa3.95□□□□□ -1.78
TUBD1-208ENST00000588009 USP27XA6NNY8 438 aa3.95□□□□□ -1.78
TUBD1-208ENST00000588009 CDC7O00311 574 aa3.95□□□□□ -1.78
TUBD1-208ENST00000588009 EIF4E2O60573 245 aaKnown RBP3.95□□□□□ -1.78
TUBD1-208ENST00000588009 SERPINA5P05154 406 aa3.95□□□□□ -1.78
TUBD1-208ENST00000588009 CD1BP29016 333 aa3.95□□□□□ -1.78
TUBD1-208ENST00000588009 SUB1P53999 127 aaKnown RBP eCLIP3.95□□□□□ -1.78
TUBD1-208ENST00000588009 IGLV3-21P80748 117 aaPredicted RBP3.95□□□□□ -1.78
TUBD1-208ENST00000588009 ZNF92Q03936 586 aa3.95□□□□□ -1.78
TUBD1-208ENST00000588009 ECH1Q13011 328 aa3.95□□□□□ -1.78
TUBD1-208ENST00000588009 DNAJC3Q13217 504 aa3.95□□□□□ -1.78
TUBD1-208ENST00000588009 C9orf129Q5T035 196 aaKnown RBP3.95□□□□□ -1.78
TUBD1-208ENST00000588009 CASC10Q5T4H9 136 aa3.95□□□□□ -1.78
TUBD1-208ENST00000588009 KRTAP5-11Q6L8G4 156 aa3.95□□□□□ -1.78
TUBD1-208ENST00000588009 ZNF774Q6NX45 483 aa3.95□□□□□ -1.78
TUBD1-208ENST00000588009 MYPOPQ86VE0 399 aaPredicted RBP3.95□□□□□ -1.78
TUBD1-208ENST00000588009 PNKDQ8N490 385 aa3.95□□□□□ -1.78
TUBD1-208ENST00000588009 ZADH2Q8N4Q0 377 aa3.95□□□□□ -1.78
TUBD1-208ENST00000588009 OR9G4Q8NGQ1 327 aa3.95□□□□□ -1.78
TUBD1-208ENST00000588009 OR5B3Q8NH48 314 aa3.95□□□□□ -1.78
TUBD1-208ENST00000588009 ZNF502Q8TBZ5 544 aa3.95□□□□□ -1.78
TUBD1-208ENST00000588009 FANK1Q8TC84 345 aa3.95□□□□□ -1.78
TUBD1-208ENST00000588009 DTX3LQ8TDB6 740 aa3.95□□□□□ -1.78
TUBD1-208ENST00000588009 CAPSLQ8WWF8 208 aa3.95□□□□□ -1.78
TUBD1-208ENST00000588009 TMEM54Q969K7 222 aa3.95□□□□□ -1.78
TUBD1-208ENST00000588009 DUS3LQ96G46 650 aaKnown RBP3.95□□□□□ -1.78
TUBD1-208ENST00000588009 C16orf74Q96GX8 76 aa3.95□□□□□ -1.78
TUBD1-208ENST00000588009 XPO6Q96QU8 1125 aaKnown RBP3.95□□□□□ -1.78
TUBD1-208ENST00000588009 ROGDIQ9GZN7 287 aa3.95□□□□□ -1.78
TUBD1-208ENST00000588009 C8orf33Q9H7E9 229 aaPredicted RBP3.95□□□□□ -1.78
TUBD1-208ENST00000588009 CYP3A43Q9HB55 503 aa3.95□□□□□ -1.78
TUBD1-208ENST00000588009 PXMP2Q9NR77 195 aa3.95□□□□□ -1.78
TUBD1-208ENST00000588009 NAP1L2Q9ULW6 460 aaPredicted RBP3.95□□□□□ -1.78
TUBD1-208ENST00000588009 ING4Q9UNL4 249 aa3.95□□□□□ -1.78
TUBD1-208ENST00000588009 IGKV1D-13A0A0B4J2D9 117 aa3.94□□□□□ -1.78
TUBD1-208ENST00000588009 FAM231BA6NCW3 169 aa3.94□□□□□ -1.78
TUBD1-208ENST00000588009 ZNF726A6NNF4 738 aa3.94□□□□□ -1.78
TUBD1-208ENST00000588009 BBOX1O75936 387 aa3.94□□□□□ -1.78
TUBD1-208ENST00000588009 CCNB2O95067 398 aa3.94□□□□□ -1.78
TUBD1-208ENST00000588009 FGFR1OPO95684 399 aaKnown RBP3.94□□□□□ -1.78
TUBD1-208ENST00000588009 OTCP00480 354 aa3.94□□□□□ -1.78
TUBD1-208ENST00000588009 IGKV1-13P0DP09 117 aa3.94□□□□□ -1.78
TUBD1-208ENST00000588009 SRMP19623 302 aa3.94□□□□□ -1.78
TUBD1-208ENST00000588009 MSR1P21757 451 aa3.94□□□□□ -1.78
TUBD1-208ENST00000588009 RORCP51449 518 aa3.94□□□□□ -1.78
TUBD1-208ENST00000588009 RAB11AP62491 216 aa3.94□□□□□ -1.78
TUBD1-208ENST00000588009 ACTA2P62736 377 aa3.94□□□□□ -1.78
TUBD1-208ENST00000588009 ACTG2P63267 376 aa3.94□□□□□ -1.78
TUBD1-208ENST00000588009 ACTC1P68032 377 aa3.94□□□□□ -1.78
TUBD1-208ENST00000588009 ACTA1P68133 377 aa3.94□□□□□ -1.78
TUBD1-208ENST00000588009 ADARB1P78563 741 aaKnown RBP3.94□□□□□ -1.78
TUBD1-208ENST00000588009 GPNMBQ14956 572 aa3.94□□□□□ -1.78
TUBD1-208ENST00000588009 NSDHLQ15738 373 aa3.94□□□□□ -1.78
TUBD1-208ENST00000588009 RAB11BQ15907 218 aa3.94□□□□□ -1.78
TUBD1-208ENST00000588009 NRF1Q16656 503 aa3.94□□□□□ -1.78
TUBD1-208ENST00000588009 OR52W1Q6IF63 320 aa3.94□□□□□ -1.78
TUBD1-208ENST00000588009 TTC23LQ6PF05 361 aa3.94□□□□□ -1.78
TUBD1-208ENST00000588009 THOC6Q86W42 341 aaKnown RBP3.94□□□□□ -1.78
TUBD1-208ENST00000588009 PRELID2Q8N945 189 aa3.94□□□□□ -1.78
TUBD1-208ENST00000588009 LYPD6BQ8NI32 183 aa3.94□□□□□ -1.78
TUBD1-208ENST00000588009 KIAA1143Q96AT1 154 aaPredicted RBP3.94□□□□□ -1.78
TUBD1-208ENST00000588009 PLEKHF1Q96S99 279 aa3.94□□□□□ -1.78
TUBD1-208ENST00000588009 OR51J1Q9H342 316 aa3.94□□□□□ -1.78
TUBD1-208ENST00000588009 SRMSQ9H3Y6 488 aa3.94□□□□□ -1.78
TUBD1-208ENST00000588009 RGCCQ9H4X1 137 aa3.94□□□□□ -1.78
TUBD1-208ENST00000588009 RPS10P5Q9NQ39 176 aa3.94□□□□□ -1.78
TUBD1-208ENST00000588009 SLC7A10Q9NS82 523 aa3.94□□□□□ -1.78
TUBD1-208ENST00000588009 HRASLS2Q9NWW9 162 aa3.94□□□□□ -1.78
TUBD1-208ENST00000588009 RHBDD3Q9Y3P4 386 aa3.94□□□□□ -1.78
TUBD1-208ENST00000588009 NEUROG3Q9Y4Z2 214 aa3.94□□□□□ -1.78
TUBD1-208ENST00000588009 SLC25A15Q9Y619 301 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms