RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 RAB1CQ92928 201 aa12.05□□□□□ -0.48
ERCC1-205ENST00000587888 RAB39BQ96DA2 213 aa12.05□□□□□ -0.48
ERCC1-205ENST00000587888 TIMD4Q96H15 378 aa12.05□□□□□ -0.48
ERCC1-205ENST00000587888 ZNF426Q9BUY5 554 aa12.05□□□□□ -0.48
ERCC1-205ENST00000587888 TMPRSS13Q9BYE2 586 aa12.05□□□□□ -0.48
ERCC1-205ENST00000587888 KAT8Q9H7Z6 458 aaKnown RBP12.05□□□□□ -0.48
ERCC1-205ENST00000587888 NANOGQ9H9S0 305 aa12.05□□□□□ -0.48
ERCC1-205ENST00000587888 SAP30LQ9HAJ7 183 aa12.05□□□□□ -0.48
ERCC1-205ENST00000587888 INIPQ9NRY2 104 aa12.05□□□□□ -0.48
ERCC1-205ENST00000587888 EIF3KQ9UBQ5 218 aaKnown RBP12.05□□□□□ -0.48
ERCC1-205ENST00000587888 SH3GLB1Q9Y371 365 aa12.05□□□□□ -0.48
ERCC1-205ENST00000587888 WIPI2Q9Y4P8 454 aa12.05□□□□□ -0.48
ERCC1-205ENST00000587888 NBEAL1Q6ZS30 2694 aa12.05□□□□□ -0.48
ERCC1-205ENST00000587888 A0A0G2JMP0 313 aa12.04□□□□□ -0.48
ERCC1-205ENST00000587888 A0A0X1KG70 313 aa12.04□□□□□ -0.48
ERCC1-205ENST00000587888 TMEM89A2RUT3 159 aa12.04□□□□□ -0.48
ERCC1-205ENST00000587888 C5orf49A4QMS7 147 aa12.04□□□□□ -0.48
ERCC1-205ENST00000587888 CLDN25C9JDP6 229 aa12.04□□□□□ -0.48
ERCC1-205ENST00000587888 SPRY1O43609 319 aaPredicted RBP12.04□□□□□ -0.48
ERCC1-205ENST00000587888 SHOX2O60902 331 aaPredicted RBP12.04□□□□□ -0.48
ERCC1-205ENST00000587888 DEAF1O75398 565 aaPredicted RBP12.04□□□□□ -0.48
ERCC1-205ENST00000587888 OR7A10O76100 309 aa12.04□□□□□ -0.48
ERCC1-205ENST00000587888 SLC2A10O95528 541 aa12.04□□□□□ -0.48
ERCC1-205ENST00000587888 IGHV3-13P01766 116 aa12.04□□□□□ -0.48
ERCC1-205ENST00000587888 MT-ND1P03886 318 aa12.04□□□□□ -0.48
ERCC1-205ENST00000587888 TNFRSF1BP20333 461 aa12.04□□□□□ -0.48
ERCC1-205ENST00000587888 MAKP20794 623 aa12.04□□□□□ -0.48
ERCC1-205ENST00000587888 GCH1P30793 250 aa12.04□□□□□ -0.48
ERCC1-205ENST00000587888 PCGF2P35227 344 aa12.04□□□□□ -0.48
ERCC1-205ENST00000587888 MPV17P39210 176 aa12.04□□□□□ -0.48
ERCC1-205ENST00000587888 HILS1P60008 231 aa12.04□□□□□ -0.48
ERCC1-205ENST00000587888 LAPTM4AQ15012 233 aa12.04□□□□□ -0.48
ERCC1-205ENST00000587888 ZNF718Q3SXZ3 478 aa12.04□□□□□ -0.48
ERCC1-205ENST00000587888 NRN1LQ496H8 165 aa12.04□□□□□ -0.48
ERCC1-205ENST00000587888 DCAF12L2Q5VW00 463 aa12.04□□□□□ -0.48
ERCC1-205ENST00000587888 TEX29Q8N6K0 151 aa12.04□□□□□ -0.48
ERCC1-205ENST00000587888 NOXO1Q8NFA2 376 aa12.04□□□□□ -0.48
ERCC1-205ENST00000587888 OR4M2Q8NGB6 313 aa12.04□□□□□ -0.48
ERCC1-205ENST00000587888 AKR7LQ8NHP1 331 aa12.04□□□□□ -0.48
ERCC1-205ENST00000587888 MOSPD2Q8NHP6 518 aa12.04□□□□□ -0.48
ERCC1-205ENST00000587888 ASB10Q8WXI3 467 aa12.04□□□□□ -0.48
ERCC1-205ENST00000587888 SGTBQ96EQ0 304 aa12.04□□□□□ -0.48
ERCC1-205ENST00000587888 SIAEQ9HAT2 523 aa12.04□□□□□ -0.48
ERCC1-205ENST00000587888 C20orf141Q9NUB4 165 aa12.04□□□□□ -0.48
ERCC1-205ENST00000587888 DYSFO75923 2080 aa12.04□□□□□ -0.48
ERCC1-205ENST00000587888 ISPDA4D126 451 aa12.03□□□□□ -0.48
ERCC1-205ENST00000587888 IGHV1-46P01743 117 aa12.03□□□□□ -0.48
ERCC1-205ENST00000587888 IGHV2-5P01817 119 aa12.03□□□□□ -0.48
ERCC1-205ENST00000587888 VIMP08670 466 aaKnown RBP12.03□□□□□ -0.48
ERCC1-205ENST00000587888 ZNF32P17041 273 aa12.03□□□□□ -0.48
ERCC1-205ENST00000587888 EGR1P18146 543 aa12.03□□□□□ -0.48
ERCC1-205ENST00000587888 DAP3P51398 398 aaKnown RBP12.03□□□□□ -0.48
ERCC1-205ENST00000587888 TAS2R41P59536 307 aa12.03□□□□□ -0.48
ERCC1-205ENST00000587888 MRPS34P82930 218 aaKnown RBP12.03□□□□□ -0.48
ERCC1-205ENST00000587888 FMODQ06828 376 aa12.03□□□□□ -0.48
ERCC1-205ENST00000587888 VMACQ2NL98 169 aa12.03□□□□□ -0.48
ERCC1-205ENST00000587888 INTS11Q5TA45 600 aaKnown RBP12.03□□□□□ -0.48
ERCC1-205ENST00000587888 USP43Q70EL4 1123 aa12.03□□□□□ -0.48
ERCC1-205ENST00000587888 ZNF101Q8IZC7 436 aa12.03□□□□□ -0.48
ERCC1-205ENST00000587888 NANPQ8TBE9 248 aa12.03□□□□□ -0.48
ERCC1-205ENST00000587888 RASSF5Q8WWW0 418 aa12.03□□□□□ -0.48
ERCC1-205ENST00000587888 C22orf15Q8WYQ4 148 aa12.03□□□□□ -0.48
ERCC1-205ENST00000587888 POM121L2Q96KW2 1035 aa12.03□□□□□ -0.48
ERCC1-205ENST00000587888 JMJD8Q96S16 334 aa12.03□□□□□ -0.48
ERCC1-205ENST00000587888 SLC6A7Q99884 636 aa12.03□□□□□ -0.48
ERCC1-205ENST00000587888 PCDHAC1Q9H158 963 aa12.03□□□□□ -0.48
ERCC1-205ENST00000587888 C7orf69Q9H7B7 122 aa12.03□□□□□ -0.48
ERCC1-205ENST00000587888 RIMS3Q9UJD0 308 aa12.03□□□□□ -0.48
ERCC1-205ENST00000587888 LOC100509620A0A075B734 347 aa12.02□□□□□ -0.49
ERCC1-205ENST00000587888 IGKV1D-43A0A0B4J1Z2 117 aa12.02□□□□□ -0.49
ERCC1-205ENST00000587888 PLSCR5A0PG75 271 aa12.02□□□□□ -0.49
ERCC1-205ENST00000587888 CENPBD1B2RD01 187 aa12.02□□□□□ -0.49
ERCC1-205ENST00000587888 MGRN1O60291 552 aa12.02□□□□□ -0.49
ERCC1-205ENST00000587888 WNT5AP41221 380 aa12.02□□□□□ -0.49
ERCC1-205ENST00000587888 COMPP49747 757 aaPredicted RBP12.02□□□□□ -0.49
ERCC1-205ENST00000587888 GDI2P50395 445 aaKnown RBP12.02□□□□□ -0.49
ERCC1-205ENST00000587888 GZMMP51124 257 aa12.02□□□□□ -0.49
ERCC1-205ENST00000587888 CRYBA2P53672 197 aa12.02□□□□□ -0.49
ERCC1-205ENST00000587888 ERVK-25P63136 954 aa12.02□□□□□ -0.49
ERCC1-205ENST00000587888 LCN2P80188 198 aa12.02□□□□□ -0.49
ERCC1-205ENST00000587888 PSG4Q00888 419 aa12.02□□□□□ -0.49
ERCC1-205ENST00000587888 CD47Q08722 323 aa12.02□□□□□ -0.49
ERCC1-205ENST00000587888 PIN1Q13526 163 aaPredicted RBP12.02□□□□□ -0.49
ERCC1-205ENST00000587888 C10orf128Q5T292 105 aa12.02□□□□□ -0.49
ERCC1-205ENST00000587888 ARMC4Q5T2S8 1044 aa12.02□□□□□ -0.49
ERCC1-205ENST00000587888 HDDC2Q7Z4H3 204 aa12.02□□□□□ -0.49
ERCC1-205ENST00000587888 C1QL2Q7Z5L3 287 aa12.02□□□□□ -0.49
ERCC1-205ENST00000587888 BPIFB2Q8N4F0 458 aa12.02□□□□□ -0.49
ERCC1-205ENST00000587888 SLC25A40Q8TBP6 338 aa12.02□□□□□ -0.49
ERCC1-205ENST00000587888 TMEM239Q8WW34 195 aa12.02□□□□□ -0.49
ERCC1-205ENST00000587888 IPCEF1Q8WWN9 437 aaPredicted RBP12.02□□□□□ -0.49
ERCC1-205ENST00000587888 HDAC2Q92769 488 aaKnown RBP12.02□□□□□ -0.49
ERCC1-205ENST00000587888 ELMOD3Q96FG2 381 aa12.02□□□□□ -0.49
ERCC1-205ENST00000587888 MARS2Q96GW9 593 aaKnown RBP12.02□□□□□ -0.49
ERCC1-205ENST00000587888 ATP6V1G3Q96LB4 118 aa12.02□□□□□ -0.49
ERCC1-205ENST00000587888 SEPHS2Q99611 448 aa12.02□□□□□ -0.49
ERCC1-205ENST00000587888 GAL3ST1Q99999 423 aa12.02□□□□□ -0.49
ERCC1-205ENST00000587888 RBM4Q9BWF3 364 aaKnown RBP12.02□□□□□ -0.49
ERCC1-205ENST00000587888 SUCNR1Q9BXA5 334 aa12.02□□□□□ -0.49
ERCC1-205ENST00000587888 OR2J1Q9GZK6 312 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms