RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 UGT2A1Q9Y4X1 527 aa12.84□□□□□ -0.35
ATG4D-207ENST00000587256 PMF1-BGLAPU3KQ54 211 aa12.84□□□□□ -0.35
ATG4D-207ENST00000587256 VSTM5A8MXK1 200 aa12.83□□□□□ -0.36
ATG4D-207ENST00000587256 H7C417 338 aa12.83□□□□□ -0.36
ATG4D-207ENST00000587256 SMAD7O15105 426 aaKnown RBP12.83□□□□□ -0.36
ATG4D-207ENST00000587256 KRT36O76013 467 aa12.83□□□□□ -0.36
ATG4D-207ENST00000587256 FPR3P25089 353 aa12.83□□□□□ -0.36
ATG4D-207ENST00000587256 THBS4P35443 961 aa12.83□□□□□ -0.36
ATG4D-207ENST00000587256 GUCA1AP43080 201 aaPredicted RBP12.83□□□□□ -0.36
ATG4D-207ENST00000587256 MAGEA2P43356 314 aa12.83□□□□□ -0.36
ATG4D-207ENST00000587256 MS4A2Q01362 244 aa12.83□□□□□ -0.36
ATG4D-207ENST00000587256 HSF2Q03933 536 aa12.83□□□□□ -0.36
ATG4D-207ENST00000587256 PLP2Q04941 152 aa12.83□□□□□ -0.36
ATG4D-207ENST00000587256 RAB35Q15286 201 aa12.83□□□□□ -0.36
ATG4D-207ENST00000587256 ADIPOQQ15848 244 aa12.83□□□□□ -0.36
ATG4D-207ENST00000587256 SGCAQ16586 387 aa12.83□□□□□ -0.36
ATG4D-207ENST00000587256 GPR139Q6DWJ6 353 aa12.83□□□□□ -0.36
ATG4D-207ENST00000587256 SLC25A47Q6Q0C1 308 aa12.83□□□□□ -0.36
ATG4D-207ENST00000587256 SMARCD3Q6STE5 483 aa12.83□□□□□ -0.36
ATG4D-207ENST00000587256 THSD4Q6ZMP0 1018 aa12.83□□□□□ -0.36
ATG4D-207ENST00000587256 POP5Q969H6 163 aaKnown RBP12.83□□□□□ -0.36
ATG4D-207ENST00000587256 RASD2Q96D21 266 aa12.83□□□□□ -0.36
ATG4D-207ENST00000587256 ZNF75AQ96N20 296 aa12.83□□□□□ -0.36
ATG4D-207ENST00000587256 GPX7Q96SL4 187 aaPredicted RBP12.83□□□□□ -0.36
ATG4D-207ENST00000587256 GPA33Q99795 319 aa12.83□□□□□ -0.36
ATG4D-207ENST00000587256 C1orf198Q9H425 327 aa12.83□□□□□ -0.36
ATG4D-207ENST00000587256 ZNF442Q9H7R0 627 aa12.83□□□□□ -0.36
ATG4D-207ENST00000587256 SIAEQ9HAT2 523 aa12.83□□□□□ -0.36
ATG4D-207ENST00000587256 VPS13CQ709C8 3753 aa12.82□□□□□ -0.36
ATG4D-207ENST00000587256 IQCMA0A1B0GVH7 501 aa12.82□□□□□ -0.36
ATG4D-207ENST00000587256 B9A039 149 aa12.82□□□□□ -0.36
ATG4D-207ENST00000587256 TNFRSF11BO00300 401 aa12.82□□□□□ -0.36
ATG4D-207ENST00000587256 SOCS2O14508 198 aa12.82□□□□□ -0.36
ATG4D-207ENST00000587256 SSX4O60224 188 aa12.82□□□□□ -0.36
ATG4D-207ENST00000587256 MGRN1O60291 552 aa12.82□□□□□ -0.36
ATG4D-207ENST00000587256 PTP4A3O75365 173 aa12.82□□□□□ -0.36
ATG4D-207ENST00000587256 PPP1R3DO95685 299 aa12.82□□□□□ -0.36
ATG4D-207ENST00000587256 SERPINA5P05154 406 aa12.82□□□□□ -0.36
ATG4D-207ENST00000587256 INHBBP09529 407 aa12.82□□□□□ -0.36
ATG4D-207ENST00000587256 NR4A1P22736 598 aa12.82□□□□□ -0.36
ATG4D-207ENST00000587256 SDHAP31040 664 aa12.82□□□□□ -0.36
ATG4D-207ENST00000587256 SLC6A6P31641 620 aa12.82□□□□□ -0.36
ATG4D-207ENST00000587256 RPS6KA3P51812 740 aa12.82□□□□□ -0.36
ATG4D-207ENST00000587256 RPS23P62266 143 aaKnown RBP12.82□□□□□ -0.36
ATG4D-207ENST00000587256 DPY19L2P2Q6ZN68 376 aa12.82□□□□□ -0.36
ATG4D-207ENST00000587256 FAM122BQ7Z309 247 aa12.82□□□□□ -0.36
ATG4D-207ENST00000587256 ZER1Q7Z7L7 766 aa12.82□□□□□ -0.36
ATG4D-207ENST00000587256 ADCK1Q86TW2 530 aa12.82□□□□□ -0.36
ATG4D-207ENST00000587256 ZNF584Q8IVC4 421 aa12.82□□□□□ -0.36
ATG4D-207ENST00000587256 SLC30A7Q8NEW0 376 aa12.82□□□□□ -0.36
ATG4D-207ENST00000587256 NABP1Q96AH0 204 aa12.82□□□□□ -0.36
ATG4D-207ENST00000587256 COX4I2Q96KJ9 171 aa12.82□□□□□ -0.36
ATG4D-207ENST00000587256 OR52D1Q9H346 318 aa12.82□□□□□ -0.36
ATG4D-207ENST00000587256 CDH20Q9HBT6 801 aa12.82□□□□□ -0.36
ATG4D-207ENST00000587256 NRIP3Q9NQ35 241 aa12.82□□□□□ -0.36
ATG4D-207ENST00000587256 SLC7A8Q9UHI5 535 aa12.82□□□□□ -0.36
ATG4D-207ENST00000587256 IER3IP1Q9Y5U9 82 aa12.82□□□□□ -0.36
ATG4D-207ENST00000587256 LYVE1Q9Y5Y7 322 aa12.82□□□□□ -0.36
ATG4D-207ENST00000587256 ZNF469Q96JG9 3925 aaPredicted RBP12.81□□□□□ -0.36
ATG4D-207ENST00000587256 SLC22A23A1A5C7 686 aa12.81□□□□□ -0.36
ATG4D-207ENST00000587256 PRSS37A4D1T9 235 aa12.81□□□□□ -0.36
ATG4D-207ENST00000587256 GPRIN2O60269 458 aa12.81□□□□□ -0.36
ATG4D-207ENST00000587256 PTHP01270 115 aa12.81□□□□□ -0.36
ATG4D-207ENST00000587256 ZNF35P13682 527 aa12.81□□□□□ -0.36
ATG4D-207ENST00000587256 ZNF32P17041 273 aa12.81□□□□□ -0.36
ATG4D-207ENST00000587256 MSR1P21757 451 aa12.81□□□□□ -0.36
ATG4D-207ENST00000587256 FXYD6P3P58550 94 aa12.81□□□□□ -0.36
ATG4D-207ENST00000587256 EFNB3Q15768 340 aa12.81□□□□□ -0.36
ATG4D-207ENST00000587256 SWI5Q1ZZU3 235 aa12.81□□□□□ -0.36
ATG4D-207ENST00000587256 TBC1D28Q2M2D7 210 aa12.81□□□□□ -0.36
ATG4D-207ENST00000587256 PGBD2Q6P3X8 592 aa12.81□□□□□ -0.36
ATG4D-207ENST00000587256 BIVMQ86UB2 503 aa12.81□□□□□ -0.36
ATG4D-207ENST00000587256 SVOPLQ8N434 492 aa12.81□□□□□ -0.36
ATG4D-207ENST00000587256 LINC00471Q8N535 108 aa12.81□□□□□ -0.36
ATG4D-207ENST00000587256 OR9Q2Q8NGE9 314 aa12.81□□□□□ -0.36
ATG4D-207ENST00000587256 GNPDA2Q8TDQ7 276 aa12.81□□□□□ -0.36
ATG4D-207ENST00000587256 IFT27Q9BW83 186 aa12.81□□□□□ -0.36
ATG4D-207ENST00000587256 SYT4Q9H2B2 425 aa12.81□□□□□ -0.36
ATG4D-207ENST00000587256 PLK3Q9H4B4 646 aa12.81□□□□□ -0.36
ATG4D-207ENST00000587256 RERGLQ9H628 205 aa12.81□□□□□ -0.36
ATG4D-207ENST00000587256 REEP1Q9H902 201 aa12.81□□□□□ -0.36
ATG4D-207ENST00000587256 DYNLRB1Q9NP97 96 aa12.81□□□□□ -0.36
ATG4D-207ENST00000587256 FKBP7Q9Y680 259 aa12.81□□□□□ -0.36
ATG4D-207ENST00000587256 AHCYL1O43865 530 aa12.8□□□□□ -0.36
ATG4D-207ENST00000587256 CCNB2O95067 398 aa12.8□□□□□ -0.36
ATG4D-207ENST00000587256 MMP7P09237 267 aaPredicted RBP12.8□□□□□ -0.36
ATG4D-207ENST00000587256 RAP2AP10114 183 aa12.8□□□□□ -0.36
ATG4D-207ENST00000587256 LAP3P28838 519 aa12.8□□□□□ -0.36
ATG4D-207ENST00000587256 APLNRP35414 380 aa12.8□□□□□ -0.36
ATG4D-207ENST00000587256 TRAP1Q12931 704 aaKnown RBP12.8□□□□□ -0.36
ATG4D-207ENST00000587256 TSPAN31Q12999 210 aa12.8□□□□□ -0.36
ATG4D-207ENST00000587256 TNK1Q13470 666 aa12.8□□□□□ -0.36
ATG4D-207ENST00000587256 FLOT2Q14254 428 aa12.8□□□□□ -0.36
ATG4D-207ENST00000587256 PABPC1L2AQ5JQF8 200 aa12.8□□□□□ -0.36
ATG4D-207ENST00000587256 FAM27BQ5VT28 67 aa12.8□□□□□ -0.36
ATG4D-207ENST00000587256 C1orf94Q6P1W5 598 aa12.8□□□□□ -0.36
ATG4D-207ENST00000587256 CLEC2AQ6UVW9 174 aa12.8□□□□□ -0.36
ATG4D-207ENST00000587256 JAZF1Q86VZ6 243 aa12.8□□□□□ -0.36
ATG4D-207ENST00000587256 CIARTQ8N365 385 aaPredicted RBP12.8□□□□□ -0.36
ATG4D-207ENST00000587256 OR52L1Q8NGH7 329 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms