RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 ZC3HAV1LQ96H79 300 aaKnown RBP12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 WFIKKN1Q96NZ8 548 aa12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 SLC29A1Q99808 456 aa12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 NUAK2Q9H093 628 aa12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 RACGAP1Q9H0H5 632 aa12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 TOR3AQ9H497 397 aa12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 SIAEQ9HAT2 523 aa12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 SRA1Q9HD15 236 aaKnown RBP12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 IMPAD1Q9NX62 359 aa12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 NKX1-2Q9UD57 310 aaPredicted RBP12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 KCNN3Q9UGI6 736 aa12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 TENM4Q6N022 2769 aa12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 LRRK2Q5S007 2527 aa12.78□□□□□ -0.36
SCAMP4-209ENST00000585335 ARPC4-TTLL3A0A0A6YYG9 625 aa12.78□□□□□ -0.36
SCAMP4-209ENST00000585335 OR6C68A6NDL8 312 aa12.78□□□□□ -0.36
SCAMP4-209ENST00000585335 UBL3O95164 117 aa12.78□□□□□ -0.36
SCAMP4-209ENST00000585335 EPXP11678 715 aa12.78□□□□□ -0.36
SCAMP4-209ENST00000585335 CTLA4P16410 223 aa12.78□□□□□ -0.36
SCAMP4-209ENST00000585335 MSR1P21757 451 aa12.78□□□□□ -0.36
SCAMP4-209ENST00000585335 LAP3P28838 519 aa12.78□□□□□ -0.36
SCAMP4-209ENST00000585335 SNTB1Q13884 538 aaKnown RBP12.78□□□□□ -0.36
SCAMP4-209ENST00000585335 TAB1Q15750 504 aa12.78□□□□□ -0.36
SCAMP4-209ENST00000585335 ZIK1Q3SY52 487 aaPredicted RBP12.78□□□□□ -0.36
SCAMP4-209ENST00000585335 SLC36A2Q495M3 483 aa12.78□□□□□ -0.36
SCAMP4-209ENST00000585335 C12orf73Q69YU5 71 aa12.78□□□□□ -0.36
SCAMP4-209ENST00000585335 ZBTB46Q86UZ6 589 aa12.78□□□□□ -0.36
SCAMP4-209ENST00000585335 WFDC8Q8IUA0 241 aa12.78□□□□□ -0.36
SCAMP4-209ENST00000585335 NELFAQ9H3P2 528 aa12.78□□□□□ -0.36
SCAMP4-209ENST00000585335 FN3KQ9H479 309 aa12.78□□□□□ -0.36
SCAMP4-209ENST00000585335 CRIM1Q9NZV1 1036 aa12.78□□□□□ -0.36
SCAMP4-209ENST00000585335 FBXL3Q9UKT7 428 aa12.78□□□□□ -0.36
SCAMP4-209ENST00000585335 B9D1Q9UPM9 204 aa12.78□□□□□ -0.36
SCAMP4-209ENST00000585335 COA3Q9Y2R0 106 aaPredicted RBP12.78□□□□□ -0.36
SCAMP4-209ENST00000585335 UGT2A1Q9Y4X1 527 aa12.78□□□□□ -0.36
SCAMP4-209ENST00000585335 GCN1Q92616 2671 aaKnown RBP12.77□□□□□ -0.36
SCAMP4-209ENST00000585335 IGKV1D-43A0A0B4J1Z2 117 aa12.77□□□□□ -0.37
SCAMP4-209ENST00000585335 C12orf71A8MTZ7 269 aa12.77□□□□□ -0.37
SCAMP4-209ENST00000585335 GOSR1O95249 250 aa12.77□□□□□ -0.37
SCAMP4-209ENST00000585335 SNAP29O95721 258 aa12.77□□□□□ -0.37
SCAMP4-209ENST00000585335 RAB36O95755 333 aa12.77□□□□□ -0.37
SCAMP4-209ENST00000585335 HLA-DQA2P01906 255 aa12.77□□□□□ -0.37
SCAMP4-209ENST00000585335 CD79AP11912 226 aa12.77□□□□□ -0.37
SCAMP4-209ENST00000585335 CDAP32320 146 aa12.77□□□□□ -0.37
SCAMP4-209ENST00000585335 PCBD1P61457 104 aa12.77□□□□□ -0.37
SCAMP4-209ENST00000585335 TMEM53Q6P2H8 277 aa12.77□□□□□ -0.37
SCAMP4-209ENST00000585335 FOXL2NBQ6ZUU3 175 aa12.77□□□□□ -0.37
SCAMP4-209ENST00000585335 CXXC5Q7LFL8 322 aaKnown RBP12.77□□□□□ -0.37
SCAMP4-209ENST00000585335 SLC16A14Q7RTX9 510 aa12.77□□□□□ -0.37
SCAMP4-209ENST00000585335 OR6V1Q8N148 313 aa12.77□□□□□ -0.37
SCAMP4-209ENST00000585335 DEPDC4Q8N2C3 294 aa12.77□□□□□ -0.37
SCAMP4-209ENST00000585335 ACBD4Q8NC06 268 aa12.77□□□□□ -0.37
SCAMP4-209ENST00000585335 OR10H5Q8NGA6 315 aa12.77□□□□□ -0.37
SCAMP4-209ENST00000585335 OR9Q1Q8NGQ5 310 aa12.77□□□□□ -0.37
SCAMP4-209ENST00000585335 GRIP2Q9C0E4 1043 aa12.77□□□□□ -0.37
SCAMP4-209ENST00000585335 CCNB1IP1Q9NPC3 277 aa12.77□□□□□ -0.37
SCAMP4-209ENST00000585335 POLE4Q9NR33 117 aa12.77□□□□□ -0.37
SCAMP4-209ENST00000585335 H2AFY2Q9P0M6 372 aaPredicted RBP12.77□□□□□ -0.37
SCAMP4-209ENST00000585335 POLR1DQ9Y2S0 133 aa12.77□□□□□ -0.37
SCAMP4-209ENST00000585335 GMPPBQ9Y5P6 360 aa12.77□□□□□ -0.37
SCAMP4-209ENST00000585335 SLC25A15Q9Y619 301 aa12.77□□□□□ -0.37
SCAMP4-209ENST00000585335 ALPK2Q86TB3 2170 aa12.77□□□□□ -0.37
SCAMP4-209ENST00000585335 IGLV1-36A0A0B4J1U3 117 aa12.76□□□□□ -0.37
SCAMP4-209ENST00000585335 CST2P09228 141 aa12.76□□□□□ -0.37
SCAMP4-209ENST00000585335 SPI1P17947 270 aa12.76□□□□□ -0.37
SCAMP4-209ENST00000585335 EPHA2P29317 976 aa12.76□□□□□ -0.37
SCAMP4-209ENST00000585335 GGT2P36268 569 aa12.76□□□□□ -0.37
SCAMP4-209ENST00000585335 ARR3P36575 388 aa12.76□□□□□ -0.37
SCAMP4-209ENST00000585335 POLR2IP36954 125 aaKnown RBP12.76□□□□□ -0.37
SCAMP4-209ENST00000585335 GSG1Q2KHT4 349 aa12.76□□□□□ -0.37
SCAMP4-209ENST00000585335 ZNF362Q5T0B9 420 aaPredicted RBP12.76□□□□□ -0.37
SCAMP4-209ENST00000585335 LCN1P1Q5VSP4 162 aa12.76□□□□□ -0.37
SCAMP4-209ENST00000585335 FAM27BQ5VT28 67 aa12.76□□□□□ -0.37
SCAMP4-209ENST00000585335 FBXW10Q5XX13 1052 aa12.76□□□□□ -0.37
SCAMP4-209ENST00000585335 PLBD1Q6P4A8 553 aa12.76□□□□□ -0.37
SCAMP4-209ENST00000585335 LRRC18Q8N456 261 aa12.76□□□□□ -0.37
SCAMP4-209ENST00000585335 WDR31Q8NA23 367 aa12.76□□□□□ -0.37
SCAMP4-209ENST00000585335 OR6K6Q8NGW6 343 aa12.76□□□□□ -0.37
SCAMP4-209ENST00000585335 FAM81AQ8TBF8 368 aa12.76□□□□□ -0.37
SCAMP4-209ENST00000585335 TMEM163Q8TC26 289 aa12.76□□□□□ -0.37
SCAMP4-209ENST00000585335 HRASLS5Q96KN8 279 aa12.76□□□□□ -0.37
SCAMP4-209ENST00000585335 TSSK2Q96PF2 358 aa12.76□□□□□ -0.37
SCAMP4-209ENST00000585335 MBOAT4Q96T53 435 aa12.76□□□□□ -0.37
SCAMP4-209ENST00000585335 WACQ9BTA9 647 aa12.76□□□□□ -0.37
SCAMP4-209ENST00000585335 NMNAT2Q9BZQ4 307 aa12.76□□□□□ -0.37
SCAMP4-209ENST00000585335 RNF121Q9H920 327 aa12.76□□□□□ -0.37
SCAMP4-209ENST00000585335 MOKQ9UQ07 419 aa12.76□□□□□ -0.37
SCAMP4-209ENST00000585335 A0A1W2PR80 420 aa12.75□□□□□ -0.37
SCAMP4-209ENST00000585335 FAM183AA6NL82 134 aa12.75□□□□□ -0.37
SCAMP4-209ENST00000585335 PRODHO43272 600 aa12.75□□□□□ -0.37
SCAMP4-209ENST00000585335 TLX2O43763 284 aaPredicted RBP12.75□□□□□ -0.37
SCAMP4-209ENST00000585335 HLA-HP01893 362 aa12.75□□□□□ -0.37
SCAMP4-209ENST00000585335 ZNF823P16415 610 aa12.75□□□□□ -0.37
SCAMP4-209ENST00000585335 CRYGSP22914 178 aa12.75□□□□□ -0.37
SCAMP4-209ENST00000585335 FMO3P31513 532 aa12.75□□□□□ -0.37
SCAMP4-209ENST00000585335 PYCR1P32322 319 aa12.75□□□□□ -0.37
SCAMP4-209ENST00000585335 PTDSS1P48651 473 aaKnown RBP12.75□□□□□ -0.37
SCAMP4-209ENST00000585335 NR1H2P55055 460 aa12.75□□□□□ -0.37
SCAMP4-209ENST00000585335 RPS7P62081 194 aaKnown RBP12.75□□□□□ -0.37
SCAMP4-209ENST00000585335 LSM6P62312 80 aaKnown RBP12.75□□□□□ -0.37
SCAMP4-209ENST00000585335 HSF2Q03933 536 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms