RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 MRPL38Q96DV4 380 aaKnown RBP12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 PNO1Q9NRX1 252 aaKnown RBP12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 LANCL2Q9NS86 450 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 MMP17Q9ULZ9 603 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 KCNMB2Q9Y691 235 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 F5H5P2 479 aa12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 ICOSLGO75144 302 aa12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 RP2O75695 350 aa12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 CXCR1P25024 350 aa12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 CALCRP30988 508 aa12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 C1QL3Q5VWW1 255 aa12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 SLC35D2Q76EJ3 337 aa12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 PRSS42Q7Z5A4 293 aa12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 ASB17Q8WXJ9 295 aa12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 KCNK15Q9H427 330 aa12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 MRTO4Q9UKD2 239 aaKnown RBP12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 B9D1Q9UPM9 204 aa12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 CACNA1CQ13936 2221 aa12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 TRAV36DV7A0A075B6V5 113 aa12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 C11orf98E9PRG8 122 aa12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 HCRTR2O43614 444 aa12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 HLA-DQA2P01906 255 aa12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 CD3DP04234 171 aa12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 PROS1P07225 676 aa12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 FBXO45P0C2W1 286 aa12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 ZNF35P13682 527 aa12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 ZP3P21754 424 aa12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 FASLGP48023 281 aa12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 UBE2MP61081 183 aaKnown RBP12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 TAGLNQ01995 201 aaKnown RBP12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 DLX2Q07687 328 aaPredicted RBP12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 TOMM20Q15388 145 aa12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 MPPED2Q15777 294 aa12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 TOMM34Q15785 309 aaPredicted RBP12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 OR7E24Q6IFN5 339 aa12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 KRT77Q7Z794 578 aa12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 NAXDQ8IW45 347 aa12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 RNF128Q8TEB7 428 aa12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 SCARB1Q8WTV0 552 aa12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 METTL21AQ8WXB1 218 aa12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 ADIPOR1Q96A54 375 aa12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 OR8D2Q9GZM6 311 aa12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 APMAPQ9HDC9 416 aa12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 COQ3Q9NZJ6 369 aa12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 SLC22A13Q9Y226 551 aa12.81□□□□□ -0.36
CDK5RAP3-237ENST00000585163 PRSS37A4D1T9 235 aa12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 MEIS3P1A6NDR6 274 aa12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 GOSR2O14653 212 aa12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 GMFGO60234 142 aa12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 WNT11O96014 354 aa12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 PNPP00491 289 aa12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 IGKV3-11P04433 115 aa12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 ATXN8OSP0DMR3 200 aa12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 GABRA1P14867 456 aa12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 PPP3CBP16298 524 aa12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 ROM1Q03395 351 aa12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 DCAF12L2Q5VW00 463 aa12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 OTPQ5XKR4 325 aa12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 PRR22Q8IZ63 422 aa12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 FAM160A2Q8N612 972 aaPredicted RBP12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 GPX8Q8TED1 209 aa12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 C1QTNF6Q9BXI9 259 aa12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 ARL6Q9H0F7 186 aa12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 ALX4Q9H161 411 aaPredicted RBP12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 EPHA6Q9UF33 1036 aa12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 SLCO1B1Q9Y6L6 691 aa12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 TMEM272A0A1B0GTI8 110 aa12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 FITM1A5D6W6 292 aa12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 A8MUA0 341 aa12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 MELTFP08582 738 aa12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 SGCBQ16585 318 aa12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 SLC18B1Q6NT16 456 aa12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 STEAP1BQ6NZ63 245 aa12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 POMZP3Q6PJE2 187 aa12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 ALKAL2Q6UX46 152 aa12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 MAMDC2Q7Z304 686 aaPredicted RBP12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 OR1J4Q8NGS1 313 aa12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 TNFAIP8L1Q8WVP5 186 aa12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 DNAJA3Q96EY1 480 aa12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 CXorf58Q96LI9 332 aa12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 NKX2-4Q9H2Z4 354 aa12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 MRPL22Q9NWU5 206 aaKnown RBP12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 MED11Q9P086 117 aa12.8□□□□□ -0.36
CDK5RAP3-237ENST00000585163 FXYD6-FXYD2A0A087WZ82 144 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 TSPAN9O75954 239 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 MT-ATP6P00846 226 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 MAP2K6P52564 334 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 ACTBP60709 375 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 RPL27P61353 136 aaKnown RBP12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 ACTG1P63261 375 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 SHHQ15465 462 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 ACKR1Q16570 336 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 ARHGAP40Q5TG30 622 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 TMEM225Q6GV28 225 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 TSSK4Q6SA08 328 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 CHRDL2Q6WN34 429 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 PLPP7Q8NBV4 271 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 ZNF519Q8TB69 540 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 ASB13Q8WXK3 278 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms