RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 CHAF1BQ13112 559 aa13.49□□□□□ -0.25
CDK5RAP3-236ENST00000584991 RTP5Q14D33 572 aa13.49□□□□□ -0.25
CDK5RAP3-236ENST00000584991 ZNF684Q5T5D7 378 aa13.49□□□□□ -0.25
CDK5RAP3-236ENST00000584991 ZBTB37Q5TC79 503 aa13.49□□□□□ -0.25
CDK5RAP3-236ENST00000584991 OR10G3Q8NGC4 313 aa13.49□□□□□ -0.25
CDK5RAP3-236ENST00000584991 ZNF431Q8TF32 576 aaPredicted RBP13.49□□□□□ -0.25
CDK5RAP3-236ENST00000584991 C17orf50Q8WW18 174 aa13.49□□□□□ -0.25
CDK5RAP3-236ENST00000584991 HSD17B8Q92506 261 aa13.49□□□□□ -0.25
CDK5RAP3-236ENST00000584991 NSMAFQ92636 917 aa13.49□□□□□ -0.25
CDK5RAP3-236ENST00000584991 PHF21AQ96BD5 680 aa13.49□□□□□ -0.25
CDK5RAP3-236ENST00000584991 SPACA9Q96E40 222 aaPredicted RBP13.49□□□□□ -0.25
CDK5RAP3-236ENST00000584991 MED30Q96HR3 178 aa13.49□□□□□ -0.25
CDK5RAP3-236ENST00000584991 SLITRK2Q9H156 845 aa13.49□□□□□ -0.25
CDK5RAP3-236ENST00000584991 ETV7Q9Y603 341 aa13.49□□□□□ -0.25
CDK5RAP3-236ENST00000584991 TRAV6A0A075B6T7 132 aa13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 MEIKINA0A087WXM9 373 aa13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 C2orf72A6NCS6 295 aa13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 ADAM10O14672 748 aa13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 TXNDC12O95881 172 aa13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 RAF1P04049 648 aa13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 SNRPBP14678 240 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 SSR4P51571 173 aa13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 SLC16A9Q7RTY1 509 aa13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 VASH2Q86V25 355 aa13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 OR11H7Q8NGC8 314 aa13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 DUSP19Q8WTR2 217 aa13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 C3orf49Q96BT1 292 aa13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 S100A16Q96FQ6 103 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 ZFP3Q96NJ6 502 aa13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 KLHDC3Q9BQ90 382 aa13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 ZFP64Q9NPA5 681 aa13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 NANSQ9NR45 359 aa13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 SCP2D1Q9UJQ7 156 aa13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 NPTNQ9Y639 398 aa13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 EIF4E2O60573 245 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 PEX14O75381 377 aa13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 CD3GP09693 182 aa13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 ITPKBP27987 946 aa13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 SRP9P49458 86 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 CCR9P51686 369 aa13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 DGCR2P98153 550 aa13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 LINC01590Q5TEZ4 76 aa13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 B3GNTL1Q67FW5 361 aaPredicted RBP13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 OPN5Q6U736 354 aa13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 OR13C5Q8NGS8 318 aa13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 THOC3Q96J01 351 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 IP6K3Q96PC2 410 aa13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 OR14A2Q96R54 314 aa13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 KLRF1Q9NZS2 232 aa13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 KLHL9Q9P2J3 617 aa13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 ELF5Q9UKW6 265 aaPredicted RBP13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 AK6Q9Y3D8 172 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 V9GY05 133 aa13.48□□□□□ -0.25
CDK5RAP3-236ENST00000584991 FREM2Q5SZK8 3169 aa13.47□□□□□ -0.25
CDK5RAP3-236ENST00000584991 OR6C68A6NDL8 312 aa13.47□□□□□ -0.25
CDK5RAP3-236ENST00000584991 ERVH48-1M5A8F1 160 aa13.47□□□□□ -0.25
CDK5RAP3-236ENST00000584991 AKR7A2O43488 359 aa13.47□□□□□ -0.25
CDK5RAP3-236ENST00000584991 NOS1APO75052 506 aaPredicted RBP13.47□□□□□ -0.25
CDK5RAP3-236ENST00000584991 TPOP07202 933 aa13.47□□□□□ -0.25
CDK5RAP3-236ENST00000584991 CD14P08571 375 aa13.47□□□□□ -0.25
CDK5RAP3-236ENST00000584991 PER3P56645 1201 aa13.47□□□□□ -0.25
CDK5RAP3-236ENST00000584991 SRSF6Q13247 344 aaKnown RBP13.47□□□□□ -0.25
CDK5RAP3-236ENST00000584991 OR5M10Q6IEU7 315 aa13.47□□□□□ -0.25
CDK5RAP3-236ENST00000584991 H3F3CQ6NXT2 135 aa13.47□□□□□ -0.25
CDK5RAP3-236ENST00000584991 LRRN1Q6UXK5 716 aa13.47□□□□□ -0.25
CDK5RAP3-236ENST00000584991 FAM220AQ7Z4H9 259 aa13.47□□□□□ -0.25
CDK5RAP3-236ENST00000584991 CMTM4Q8IZR5 234 aa13.47□□□□□ -0.25
CDK5RAP3-236ENST00000584991 ARMC10Q8N2F6 343 aa13.47□□□□□ -0.25
CDK5RAP3-236ENST00000584991 TMEM156Q8N614 296 aa13.47□□□□□ -0.25
CDK5RAP3-236ENST00000584991 ZNF563Q8TA94 476 aa13.47□□□□□ -0.25
CDK5RAP3-236ENST00000584991 LGALS14Q8TCE9 139 aa13.47□□□□□ -0.25
CDK5RAP3-236ENST00000584991 RNF138Q8WVD3 245 aa13.47□□□□□ -0.25
CDK5RAP3-236ENST00000584991 ZNF524Q96C55 264 aa13.47□□□□□ -0.25
CDK5RAP3-236ENST00000584991 NMNAT3Q96T66 252 aa13.47□□□□□ -0.25
CDK5RAP3-236ENST00000584991 ALG12Q9BV10 488 aa13.47□□□□□ -0.25
CDK5RAP3-236ENST00000584991 METTL7AQ9H8H3 244 aa13.47□□□□□ -0.25
CDK5RAP3-236ENST00000584991 ZNF222Q9UK12 451 aa13.47□□□□□ -0.25
CDK5RAP3-236ENST00000584991 FBXL3Q9UKT7 428 aa13.47□□□□□ -0.25
CDK5RAP3-236ENST00000584991 MGAT4AQ9UM21 535 aa13.47□□□□□ -0.25
CDK5RAP3-236ENST00000584991 ELOA3DA6NLF2 546 aaPredicted RBP13.46□□□□□ -0.25
CDK5RAP3-236ENST00000584991 PHYHO14832 338 aa13.46□□□□□ -0.25
CDK5RAP3-236ENST00000584991 NUDT14O95848 222 aa13.46□□□□□ -0.25
CDK5RAP3-236ENST00000584991 PSMB1P20618 241 aaKnown RBP13.46□□□□□ -0.25
CDK5RAP3-236ENST00000584991 C4BPBP20851 252 aa13.46□□□□□ -0.25
CDK5RAP3-236ENST00000584991 DPP4P27487 766 aa13.46□□□□□ -0.25
CDK5RAP3-236ENST00000584991 GDNFP39905 211 aa13.46□□□□□ -0.25
CDK5RAP3-236ENST00000584991 NAA10P41227 235 aaPredicted RBP13.46□□□□□ -0.25
CDK5RAP3-236ENST00000584991 OR3A3P47888 321 aa13.46□□□□□ -0.25
CDK5RAP3-236ENST00000584991 SLC6A8P48029 635 aa13.46□□□□□ -0.25
CDK5RAP3-236ENST00000584991 P2RX1P51575 399 aa13.46□□□□□ -0.25
CDK5RAP3-236ENST00000584991 HCCSP53701 268 aa13.46□□□□□ -0.25
CDK5RAP3-236ENST00000584991 ELOA3BQ3SY89 546 aa13.46□□□□□ -0.25
CDK5RAP3-236ENST00000584991 Q499Y3 187 aa13.46□□□□□ -0.25
CDK5RAP3-236ENST00000584991 ESCO2Q56NI9 601 aa13.46□□□□□ -0.25
CDK5RAP3-236ENST00000584991 DCAF10Q5QP82 559 aa13.46□□□□□ -0.25
CDK5RAP3-236ENST00000584991 ATP1A1-AS1Q5TC04 95 aa13.46□□□□□ -0.25
CDK5RAP3-236ENST00000584991 METTL11BQ5VVY1 283 aa13.46□□□□□ -0.25
CDK5RAP3-236ENST00000584991 TEX261Q6UWH6 196 aa13.46□□□□□ -0.25
CDK5RAP3-236ENST00000584991 MISPQ8IVT2 679 aa13.46□□□□□ -0.25
CDK5RAP3-236ENST00000584991 OR6V1Q8N148 313 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms