RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 SORCS2Q96PQ0 1159 aa8.54□□□□□ -1.04
SKA2-208ENST00000583927 RBP7Q96R05 134 aa8.54□□□□□ -1.04
SKA2-208ENST00000583927 TNFRSF13CQ96RJ3 184 aa8.54□□□□□ -1.04
SKA2-208ENST00000583927 CDRT15Q96T59 188 aa8.54□□□□□ -1.04
SKA2-208ENST00000583927 NDEL1Q9GZM8 345 aa8.54□□□□□ -1.04
SKA2-208ENST00000583927 RAB1BQ9H0U4 201 aa8.54□□□□□ -1.04
SKA2-208ENST00000583927 IL1RAPQ9NPH3 570 aa8.54□□□□□ -1.04
SKA2-208ENST00000583927 ZNF346Q9UL40 294 aaKnown RBP8.54□□□□□ -1.04
SKA2-208ENST00000583927 SIGLEC7Q9Y286 467 aa8.54□□□□□ -1.04
SKA2-208ENST00000583927 UGT2A1Q9Y4X1 527 aa8.54□□□□□ -1.04
SKA2-208ENST00000583927 IGHV4-30-2A0A087WSY4 118 aa8.53□□□□□ -1.04
SKA2-208ENST00000583927 TRAV27A0A087WT01 109 aa8.53□□□□□ -1.04
SKA2-208ENST00000583927 LOC390937A0A1W2PQ73 354 aa8.53□□□□□ -1.04
SKA2-208ENST00000583927 VWC2LB2RUY7 222 aa8.53□□□□□ -1.04
SKA2-208ENST00000583927 hCG_2039718K7EN88 272 aa8.53□□□□□ -1.04
SKA2-208ENST00000583927 ARPC2O15144 300 aa8.53□□□□□ -1.04
SKA2-208ENST00000583927 SYNGR3O43761 229 aa8.53□□□□□ -1.04
SKA2-208ENST00000583927 TLX2O43763 284 aaPredicted RBP8.53□□□□□ -1.04
SKA2-208ENST00000583927 CD5LO43866 347 aa8.53□□□□□ -1.04
SKA2-208ENST00000583927 ICMTO60725 284 aa8.53□□□□□ -1.04
SKA2-208ENST00000583927 OMPP47874 163 aa8.53□□□□□ -1.04
SKA2-208ENST00000583927 PDLIM4P50479 330 aa8.53□□□□□ -1.04
SKA2-208ENST00000583927 GALK2Q01415 458 aa8.53□□□□□ -1.04
SKA2-208ENST00000583927 CD47Q08722 323 aa8.53□□□□□ -1.04
SKA2-208ENST00000583927 RAB39AQ14964 217 aa8.53□□□□□ -1.04
SKA2-208ENST00000583927 GPR139Q6DWJ6 353 aa8.53□□□□□ -1.04
SKA2-208ENST00000583927 KRT80Q6KB66 452 aa8.53□□□□□ -1.04
SKA2-208ENST00000583927 PODNL1Q6PEZ8 512 aa8.53□□□□□ -1.04
SKA2-208ENST00000583927 TBPL2Q6SJ96 375 aa8.53□□□□□ -1.04
SKA2-208ENST00000583927 DEFB107AQ8IZN7 70 aa8.53□□□□□ -1.04
SKA2-208ENST00000583927 ZNF525Q8N782 197 aa8.53□□□□□ -1.04
SKA2-208ENST00000583927 RNF148Q8N7C7 305 aa8.53□□□□□ -1.04
SKA2-208ENST00000583927 FAM86B1Q8N7N1 296 aa8.53□□□□□ -1.04
SKA2-208ENST00000583927 RBM15BQ8NDT2 890 aaKnown RBP8.53□□□□□ -1.04
SKA2-208ENST00000583927 SLC30A7Q8NEW0 376 aa8.53□□□□□ -1.04
SKA2-208ENST00000583927 OR13C2Q8NGS9 318 aa8.53□□□□□ -1.04
SKA2-208ENST00000583927 OR51A7Q8NH64 312 aa8.53□□□□□ -1.04
SKA2-208ENST00000583927 FGFBP3Q8TAT2 258 aa8.53□□□□□ -1.04
SKA2-208ENST00000583927 NEU4Q8WWR8 484 aaPredicted RBP8.53□□□□□ -1.04
SKA2-208ENST00000583927 TSPAN32Q96QS1 320 aa8.53□□□□□ -1.04
SKA2-208ENST00000583927 SH3GL3Q99963 347 aa8.53□□□□□ -1.04
SKA2-208ENST00000583927 KCNN2Q9H2S1 579 aa8.53□□□□□ -1.04
SKA2-208ENST00000583927 MUC13Q9H3R2 512 aa8.53□□□□□ -1.04
SKA2-208ENST00000583927 KRCC1Q9NPI7 259 aaPredicted RBP8.53□□□□□ -1.04
SKA2-208ENST00000583927 NRIP3Q9NQ35 241 aa8.53□□□□□ -1.04
SKA2-208ENST00000583927 FAM53CQ9NYF3 392 aa8.53□□□□□ -1.04
SKA2-208ENST00000583927 IGLV3-9A0A075B6K5 115 aa8.52□□□□□ -1.05
SKA2-208ENST00000583927 IGKV1D-43A0A0B4J1Z2 117 aa8.52□□□□□ -1.05
SKA2-208ENST00000583927 IQCMA0A1B0GVH7 501 aa8.52□□□□□ -1.05
SKA2-208ENST00000583927 SH3PXD2BA1X283 911 aa8.52□□□□□ -1.05
SKA2-208ENST00000583927 NDUFB2O95178 105 aa8.52□□□□□ -1.05
SKA2-208ENST00000583927 SLC2A10O95528 541 aa8.52□□□□□ -1.05
SKA2-208ENST00000583927 TXNDC12O95881 172 aa8.52□□□□□ -1.05
SKA2-208ENST00000583927 ERCC1P07992 297 aaPredicted RBP8.52□□□□□ -1.05
SKA2-208ENST00000583927 IGFBP1P08833 259 aaPredicted RBP8.52□□□□□ -1.05
SKA2-208ENST00000583927 CST2P09228 141 aa8.52□□□□□ -1.05
SKA2-208ENST00000583927 PATE4P0C8F1 98 aa8.52□□□□□ -1.05
SKA2-208ENST00000583927 APEHP13798 732 aaKnown RBP8.52□□□□□ -1.05
SKA2-208ENST00000583927 ZNF250P15622 560 aa8.52□□□□□ -1.05
SKA2-208ENST00000583927 ZNF26P17031 533 aaPredicted RBP8.52□□□□□ -1.05
SKA2-208ENST00000583927 GIFP27352 417 aa8.52□□□□□ -1.05
SKA2-208ENST00000583927 SDHAP31040 664 aa8.52□□□□□ -1.05
SKA2-208ENST00000583927 RAD52P43351 418 aa8.52□□□□□ -1.05
SKA2-208ENST00000583927 GPR4P46093 362 aa8.52□□□□□ -1.05
SKA2-208ENST00000583927 HMGA2P52926 109 aa8.52□□□□□ -1.05
SKA2-208ENST00000583927 PCBD1P61457 104 aa8.52□□□□□ -1.05
SKA2-208ENST00000583927 MYBPC1Q00872 1141 aa8.52□□□□□ -1.05
SKA2-208ENST00000583927 PLP2Q04941 152 aa8.52□□□□□ -1.05
SKA2-208ENST00000583927 TBC1D28Q2M2D7 210 aa8.52□□□□□ -1.05
SKA2-208ENST00000583927 VHLLQ6RSH7 139 aa8.52□□□□□ -1.05
SKA2-208ENST00000583927 ZNF540Q8NDQ6 660 aa8.52□□□□□ -1.05
SKA2-208ENST00000583927 NSMCE2Q96MF7 247 aa8.52□□□□□ -1.05
SKA2-208ENST00000583927 MRPL37Q9BZE1 423 aaKnown RBP8.52□□□□□ -1.05
SKA2-208ENST00000583927 BCL2L14Q9BZR8 327 aa8.52□□□□□ -1.05
SKA2-208ENST00000583927 C1orf21Q9H246 121 aa8.52□□□□□ -1.05
SKA2-208ENST00000583927 LRMDAQ9H2I8 198 aa8.52□□□□□ -1.05
SKA2-208ENST00000583927 MS4A5Q9H3V2 200 aa8.52□□□□□ -1.05
SKA2-208ENST00000583927 ACTR3BQ9P1U1 418 aa8.52□□□□□ -1.05
SKA2-208ENST00000583927 GRHPRQ9UBQ7 328 aa8.52□□□□□ -1.05
SKA2-208ENST00000583927 ATRQ13535 2644 aa8.52□□□□□ -1.05
SKA2-208ENST00000583927 DOCK11Q5JSL3 2073 aa8.51□□□□□ -1.05
SKA2-208ENST00000583927 TRBV4-1A0A0J9YWV2 114 aa8.51□□□□□ -1.05
SKA2-208ENST00000583927 PRSS37A4D1T9 235 aa8.51□□□□□ -1.05
SKA2-208ENST00000583927 H3BSA7 217 aa8.51□□□□□ -1.05
SKA2-208ENST00000583927 XKRYO14609 159 aa8.51□□□□□ -1.05
SKA2-208ENST00000583927 IMPA2O14732 288 aa8.51□□□□□ -1.05
SKA2-208ENST00000583927 GPRIN2O60269 458 aa8.51□□□□□ -1.05
SKA2-208ENST00000583927 KRT36O76013 467 aa8.51□□□□□ -1.05
SKA2-208ENST00000583927 GADD45GO95257 159 aa8.51□□□□□ -1.05
SKA2-208ENST00000583927 TP53P04637 393 aaPredicted RBP8.51□□□□□ -1.05
SKA2-208ENST00000583927 COX5BP10606 129 aa8.51□□□□□ -1.05
SKA2-208ENST00000583927 TCN1P20061 433 aaPredicted RBP8.51□□□□□ -1.05
SKA2-208ENST00000583927 CALB2P22676 271 aa8.51□□□□□ -1.05
SKA2-208ENST00000583927 GUCA1AP43080 201 aaPredicted RBP8.51□□□□□ -1.05
SKA2-208ENST00000583927 MAGEA2P43356 314 aa8.51□□□□□ -1.05
SKA2-208ENST00000583927 UCP2P55851 309 aa8.51□□□□□ -1.05
SKA2-208ENST00000583927 FXYD6P3P58550 94 aa8.51□□□□□ -1.05
SKA2-208ENST00000583927 FMODQ06828 376 aa8.51□□□□□ -1.05
SKA2-208ENST00000583927 TOP3AQ13472 1001 aaPredicted RBP8.51□□□□□ -1.05
SKA2-208ENST00000583927 SEC23BQ15437 767 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms