RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	AKR7L	Q8NHP1	331 aa		12.89	□□□□□ -0.35
SREBF1-222	ENST00000583732	MOSPD2	Q8NHP6	518 aa		12.89	□□□□□ -0.35
SREBF1-222	ENST00000583732	TMEM255B	Q8WV15	326 aa		12.89	□□□□□ -0.35
SREBF1-222	ENST00000583732	ZFAND2B	Q8WV99	257 aa		12.89	□□□□□ -0.35
SREBF1-222	ENST00000583732	IPCEF1	Q8WWN9	437 aa	Predicted RBP	12.89	□□□□□ -0.35
SREBF1-222	ENST00000583732	NSMAF	Q92636	917 aa		12.89	□□□□□ -0.35
SREBF1-222	ENST00000583732	GCDH	Q92947	438 aa	Predicted RBP	12.89	□□□□□ -0.35
SREBF1-222	ENST00000583732	SGTB	Q96EQ0	304 aa		12.89	□□□□□ -0.35
SREBF1-222	ENST00000583732	TMPRSS13	Q9BYE2	586 aa		12.89	□□□□□ -0.35
SREBF1-222	ENST00000583732	KCNN2	Q9H2S1	579 aa		12.89	□□□□□ -0.35
SREBF1-222	ENST00000583732	KAT8	Q9H7Z6	458 aa	Known RBP	12.89	□□□□□ -0.35
SREBF1-222	ENST00000583732	NANOG	Q9H9S0	305 aa		12.89	□□□□□ -0.35
SREBF1-222	ENST00000583732	INIP	Q9NRY2	104 aa		12.89	□□□□□ -0.35
SREBF1-222	ENST00000583732	C20orf141	Q9NUB4	165 aa		12.89	□□□□□ -0.35
SREBF1-222	ENST00000583732	SH3GLB1	Q9Y371	365 aa		12.89	□□□□□ -0.35
SREBF1-222	ENST00000583732	TANC2	Q9HCD6	1990 aa		12.89	□□□□□ -0.35
SREBF1-222	ENST00000583732	IGKV1D-43	A0A0B4J1Z2	117 aa		12.88	□□□□□ -0.35
SREBF1-222	ENST00000583732		A0A0G2JMP0	313 aa		12.88	□□□□□ -0.35
SREBF1-222	ENST00000583732		A0A0X1KG70	313 aa		12.88	□□□□□ -0.35
SREBF1-222	ENST00000583732	ISPD	A4D126	451 aa		12.88	□□□□□ -0.35
SREBF1-222	ENST00000583732	TRIM77	I1YAP6	450 aa		12.88	□□□□□ -0.35
SREBF1-222	ENST00000583732	DEAF1	O75398	565 aa	Predicted RBP	12.88	□□□□□ -0.35
SREBF1-222	ENST00000583732	IGHV2-5	P01817	119 aa		12.88	□□□□□ -0.35
SREBF1-222	ENST00000583732	MT-ND1	P03886	318 aa		12.88	□□□□□ -0.35
SREBF1-222	ENST00000583732	ANPEP	P15144	967 aa		12.88	□□□□□ -0.35
SREBF1-222	ENST00000583732	ZNF32	P17041	273 aa		12.88	□□□□□ -0.35
SREBF1-222	ENST00000583732	MPV17	P39210	176 aa		12.88	□□□□□ -0.35
SREBF1-222	ENST00000583732	WNT5A	P41221	380 aa		12.88	□□□□□ -0.35
SREBF1-222	ENST00000583732	DAP3	P51398	398 aa	Known RBP	12.88	□□□□□ -0.35
SREBF1-222	ENST00000583732	ZNF81	P51508	661 aa		12.88	□□□□□ -0.35
SREBF1-222	ENST00000583732	CRYBA2	P53672	197 aa		12.88	□□□□□ -0.35
SREBF1-222	ENST00000583732	HILS1	P60008	231 aa		12.88	□□□□□ -0.35
SREBF1-222	ENST00000583732	CD47	Q08722	323 aa		12.88	□□□□□ -0.35
SREBF1-222	ENST00000583732	TOP3A	Q13472	1001 aa	Predicted RBP	12.88	□□□□□ -0.35
SREBF1-222	ENST00000583732	SGCA	Q16586	387 aa		12.88	□□□□□ -0.35
SREBF1-222	ENST00000583732	VMAC	Q2NL98	169 aa		12.88	□□□□□ -0.35
SREBF1-222	ENST00000583732	HFE	Q30201	348 aa		12.88	□□□□□ -0.35
SREBF1-222	ENST00000583732	TTMP	Q5BVD1	217 aa		12.88	□□□□□ -0.35
SREBF1-222	ENST00000583732	THEM4	Q5T1C6	240 aa		12.88	□□□□□ -0.35
SREBF1-222	ENST00000583732	INTS11	Q5TA45	600 aa	Known RBP	12.88	□□□□□ -0.35
SREBF1-222	ENST00000583732	ZNF101	Q8IZC7	436 aa		12.88	□□□□□ -0.35
SREBF1-222	ENST00000583732	C3orf56	Q8N813	242 aa		12.88	□□□□□ -0.35
SREBF1-222	ENST00000583732	OR4M2	Q8NGB6	313 aa		12.88	□□□□□ -0.35
SREBF1-222	ENST00000583732	HDAC2	Q92769	488 aa	Known RBP	12.88	□□□□□ -0.35
SREBF1-222	ENST00000583732	SLC6A7	Q99884	636 aa		12.88	□□□□□ -0.35
SREBF1-222	ENST00000583732	MRPL13	Q9BYD1	178 aa	Known RBP	12.88	□□□□□ -0.35
SREBF1-222	ENST00000583732	PCDHAC1	Q9H158	963 aa		12.88	□□□□□ -0.35
SREBF1-222	ENST00000583732	NKIRAS2	Q9NYR9	191 aa		12.88	□□□□□ -0.35
SREBF1-222	ENST00000583732	C5orf49	A4QMS7	147 aa		12.87	□□□□□ -0.35
SREBF1-222	ENST00000583732	PIP5K1C	O60331	668 aa		12.87	□□□□□ -0.35
SREBF1-222	ENST00000583732	IGHV1-46	P01743	117 aa		12.87	□□□□□ -0.35
SREBF1-222	ENST00000583732	IGHV3-13	P01766	116 aa		12.87	□□□□□ -0.35
SREBF1-222	ENST00000583732	VIM	P08670	466 aa	Known RBP	12.87	□□□□□ -0.35
SREBF1-222	ENST00000583732	STOM	P27105	288 aa		12.87	□□□□□ -0.35
SREBF1-222	ENST00000583732	GCH1	P30793	250 aa		12.87	□□□□□ -0.35
SREBF1-222	ENST00000583732	ERVK-25	P63136	954 aa		12.87	□□□□□ -0.35
SREBF1-222	ENST00000583732	ZNF718	Q3SXZ3	478 aa		12.87	□□□□□ -0.35
SREBF1-222	ENST00000583732	MMEL1	Q495T6	779 aa		12.87	□□□□□ -0.35
SREBF1-222	ENST00000583732	NRN1L	Q496H8	165 aa		12.87	□□□□□ -0.35
SREBF1-222	ENST00000583732	TMEM255A	Q5JRV8	349 aa		12.87	□□□□□ -0.35
SREBF1-222	ENST00000583732	C10orf128	Q5T292	105 aa		12.87	□□□□□ -0.35
SREBF1-222	ENST00000583732	DCAF12L2	Q5VW00	463 aa		12.87	□□□□□ -0.35
SREBF1-222	ENST00000583732	HDDC2	Q7Z4H3	204 aa		12.87	□□□□□ -0.35
SREBF1-222	ENST00000583732	C1QL2	Q7Z5L3	287 aa		12.87	□□□□□ -0.35
SREBF1-222	ENST00000583732	SLC25A40	Q8TBP6	338 aa		12.87	□□□□□ -0.35
SREBF1-222	ENST00000583732	RASSF5	Q8WWW0	418 aa		12.87	□□□□□ -0.35
SREBF1-222	ENST00000583732	CCL17	Q92583	94 aa		12.87	□□□□□ -0.35
SREBF1-222	ENST00000583732	RAB1C	Q92928	201 aa		12.87	□□□□□ -0.35
SREBF1-222	ENST00000583732	NABP1	Q96AH0	204 aa		12.87	□□□□□ -0.35
SREBF1-222	ENST00000583732	ELMOD3	Q96FG2	381 aa		12.87	□□□□□ -0.35
SREBF1-222	ENST00000583732	TIMD4	Q96H15	378 aa		12.87	□□□□□ -0.35
SREBF1-222	ENST00000583732	ATP6V1G3	Q96LB4	118 aa		12.87	□□□□□ -0.35
SREBF1-222	ENST00000583732	GAL3ST1	Q99999	423 aa		12.87	□□□□□ -0.35
SREBF1-222	ENST00000583732	NPHS2	Q9NP85	383 aa		12.87	□□□□□ -0.35
SREBF1-222	ENST00000583732	UBAP1	Q9NZ09	502 aa		12.87	□□□□□ -0.35
SREBF1-222	ENST00000583732	UGT2A1	Q9Y4X1	527 aa		12.87	□□□□□ -0.35
SREBF1-222	ENST00000583732	ZSCAN5B	A6NJL1	495 aa		12.86	□□□□□ -0.35
SREBF1-222	ENST00000583732	SPRY1	O43609	319 aa	Predicted RBP	12.86	□□□□□ -0.35
SREBF1-222	ENST00000583732	MGRN1	O60291	552 aa		12.86	□□□□□ -0.35
SREBF1-222	ENST00000583732	GDI2	P50395	445 aa	Known RBP	12.86	□□□□□ -0.35
SREBF1-222	ENST00000583732	GZMM	P51124	257 aa		12.86	□□□□□ -0.35
SREBF1-222	ENST00000583732	LCN2	P80188	198 aa		12.86	□□□□□ -0.35
SREBF1-222	ENST00000583732	MRPS34	P82930	218 aa	Known RBP	12.86	□□□□□ -0.35
SREBF1-222	ENST00000583732	PIN1	Q13526	163 aa	Predicted RBP	12.86	□□□□□ -0.35
SREBF1-222	ENST00000583732	MOG	Q16653	247 aa		12.86	□□□□□ -0.35
SREBF1-222	ENST00000583732	RABL3	Q5HYI8	236 aa		12.86	□□□□□ -0.35
SREBF1-222	ENST00000583732	ARMC4	Q5T2S8	1044 aa		12.86	□□□□□ -0.35
SREBF1-222	ENST00000583732	RFPL4B	Q6ZWI9	263 aa		12.86	□□□□□ -0.35
SREBF1-222	ENST00000583732	BPIFB2	Q8N4F0	458 aa		12.86	□□□□□ -0.35
SREBF1-222	ENST00000583732	TEX29	Q8N6K0	151 aa		12.86	□□□□□ -0.35
SREBF1-222	ENST00000583732	ABHD4	Q8TB40	342 aa		12.86	□□□□□ -0.35
SREBF1-222	ENST00000583732	FAM216A	Q8WUB2	273 aa		12.86	□□□□□ -0.35
SREBF1-222	ENST00000583732	TMEM239	Q8WW34	195 aa		12.86	□□□□□ -0.35
SREBF1-222	ENST00000583732	GEMIN6	Q8WXD5	167 aa	Known RBP	12.86	□□□□□ -0.35
SREBF1-222	ENST00000583732	C22orf15	Q8WYQ4	148 aa		12.86	□□□□□ -0.35
SREBF1-222	ENST00000583732	POM121L2	Q96KW2	1035 aa		12.86	□□□□□ -0.35
SREBF1-222	ENST00000583732	SEPHS2	Q99611	448 aa		12.86	□□□□□ -0.35
SREBF1-222	ENST00000583732	RBM4	Q9BWF3	364 aa	Known RBP	12.86	□□□□□ -0.35
SREBF1-222	ENST00000583732	SUCNR1	Q9BXA5	334 aa		12.86	□□□□□ -0.35
SREBF1-222	ENST00000583732	OR2J1	Q9GZK6	312 aa		12.86	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms