RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 CDH20Q9HBT6 801 aa10.45□□□□□ -0.74
TOP3A-215ENST00000583328 PLEK2Q9NYT0 353 aa10.45□□□□□ -0.74
TOP3A-215ENST00000583328 ABCD2Q9UBJ2 740 aa10.45□□□□□ -0.74
TOP3A-215ENST00000583328 ANGPT4Q9Y264 503 aa10.45□□□□□ -0.74
TOP3A-215ENST00000583328 IFT52Q9Y366 437 aa10.45□□□□□ -0.74
TOP3A-215ENST00000583328 CHST2Q9Y4C5 530 aa10.45□□□□□ -0.74
TOP3A-215ENST00000583328 IGLV3-9A0A075B6K5 115 aa10.44□□□□□ -0.74
TOP3A-215ENST00000583328 TRAV36DV7A0A075B6V5 113 aa10.44□□□□□ -0.74
TOP3A-215ENST00000583328 FAM220BPB1ANY3 271 aa10.44□□□□□ -0.74
TOP3A-215ENST00000583328 NME4O00746 187 aa10.44□□□□□ -0.74
TOP3A-215ENST00000583328 FZD7O75084 574 aa10.44□□□□□ -0.74
TOP3A-215ENST00000583328 HPRP00739 348 aa10.44□□□□□ -0.74
TOP3A-215ENST00000583328 MT-ND5P03915 603 aa10.44□□□□□ -0.74
TOP3A-215ENST00000583328 RNASE1P07998 156 aaKnown RBP10.44□□□□□ -0.74
TOP3A-215ENST00000583328 CCL2P13500 99 aa10.44□□□□□ -0.74
TOP3A-215ENST00000583328 ETS2P15036 469 aa10.44□□□□□ -0.74
TOP3A-215ENST00000583328 PCGF2P35227 344 aa10.44□□□□□ -0.74
TOP3A-215ENST00000583328 SLC7A2P52569 658 aa10.44□□□□□ -0.74
TOP3A-215ENST00000583328 ERVS71-1P61550 626 aa10.44□□□□□ -0.74
TOP3A-215ENST00000583328 CBX1P83916 185 aa10.44□□□□□ -0.74
TOP3A-215ENST00000583328 GLO1Q04760 184 aa10.44□□□□□ -0.74
TOP3A-215ENST00000583328 OCLNQ16625 522 aa10.44□□□□□ -0.74
TOP3A-215ENST00000583328 VMACQ2NL98 169 aa10.44□□□□□ -0.74
TOP3A-215ENST00000583328 INTS11Q5TA45 600 aaKnown RBP10.44□□□□□ -0.74
TOP3A-215ENST00000583328 LEG1Q6P5S2 330 aa10.44□□□□□ -0.74
TOP3A-215ENST00000583328 C16orf89Q6UX73 402 aa10.44□□□□□ -0.74
TOP3A-215ENST00000583328 PIWIL3Q7Z3Z3 882 aaKnown RBP10.44□□□□□ -0.74
TOP3A-215ENST00000583328 KRT73Q86Y46 540 aa10.44□□□□□ -0.74
TOP3A-215ENST00000583328 SKA3Q8IX90 412 aa10.44□□□□□ -0.74
TOP3A-215ENST00000583328 PGAM4Q8N0Y7 254 aa10.44□□□□□ -0.74
TOP3A-215ENST00000583328 ADPRHL1Q8NDY3 354 aa10.44□□□□□ -0.74
TOP3A-215ENST00000583328 SLC30A7Q8NEW0 376 aa10.44□□□□□ -0.74
TOP3A-215ENST00000583328 OR2T12Q8NG77 320 aa10.44□□□□□ -0.74
TOP3A-215ENST00000583328 FGFBP3Q8TAT2 258 aa10.44□□□□□ -0.74
TOP3A-215ENST00000583328 ZNF519Q8TB69 540 aa10.44□□□□□ -0.74
TOP3A-215ENST00000583328 ZNF583Q96ND8 569 aa10.44□□□□□ -0.74
TOP3A-215ENST00000583328 ASPNQ9BXN1 380 aa10.44□□□□□ -0.74
TOP3A-215ENST00000583328 RNF121Q9H920 327 aa10.44□□□□□ -0.74
TOP3A-215ENST00000583328 C12orf10Q9HB07 376 aa10.44□□□□□ -0.74
TOP3A-215ENST00000583328 SPAG4Q9NPE6 437 aa10.44□□□□□ -0.74
TOP3A-215ENST00000583328 CMTM6Q9NX76 183 aa10.44□□□□□ -0.74
TOP3A-215ENST00000583328 AUP1Q9Y679 476 aa10.44□□□□□ -0.74
TOP3A-215ENST00000583328 PPIAL4EA0A075B759 164 aa10.43□□□□□ -0.74
TOP3A-215ENST00000583328 A0A087WUJ7 227 aa10.43□□□□□ -0.74
TOP3A-215ENST00000583328 PPIAL4CA0A0B4J2A2 164 aa10.43□□□□□ -0.74
TOP3A-215ENST00000583328 B2RBV5 119 aa10.43□□□□□ -0.74
TOP3A-215ENST00000583328 PPIAL4DF5H284 164 aa10.43□□□□□ -0.74
TOP3A-215ENST00000583328 SPRY3O43610 288 aa10.43□□□□□ -0.74
TOP3A-215ENST00000583328 ENTPD5O75356 428 aa10.43□□□□□ -0.74
TOP3A-215ENST00000583328 SERPINI2O75830 405 aa10.43□□□□□ -0.74
TOP3A-215ENST00000583328 UBOX5O94941 541 aa10.43□□□□□ -0.74
TOP3A-215ENST00000583328 OR8G3PP0DMU2 310 aa10.43□□□□□ -0.74
TOP3A-215ENST00000583328 PPIAL4FP0DN26 164 aa10.43□□□□□ -0.74
TOP3A-215ENST00000583328 T-ENOLP0DO92 83 aa10.43□□□□□ -0.74
TOP3A-215ENST00000583328 MAKP20794 623 aa10.43□□□□□ -0.74
TOP3A-215ENST00000583328 MDKP21741 143 aaPredicted RBP10.43□□□□□ -0.74
TOP3A-215ENST00000583328 GCH1P30793 250 aa10.43□□□□□ -0.74
TOP3A-215ENST00000583328 CSNK1A1P48729 337 aa10.43□□□□□ -0.74
TOP3A-215ENST00000583328 ZNF81P51508 661 aa10.43□□□□□ -0.74
TOP3A-215ENST00000583328 PCBP3P57721 371 aaKnown RBP10.43□□□□□ -0.74
TOP3A-215ENST00000583328 LIPEQ05469 1076 aa10.43□□□□□ -0.74
TOP3A-215ENST00000583328 SLC3A1Q07837 685 aa10.43□□□□□ -0.74
TOP3A-215ENST00000583328 PMS2P3Q13401 168 aa10.43□□□□□ -0.74
TOP3A-215ENST00000583328 TUSC1Q2TAM9 212 aa10.43□□□□□ -0.74
TOP3A-215ENST00000583328 C6orf89Q6UWU4 347 aa10.43□□□□□ -0.74
TOP3A-215ENST00000583328 PAQR4Q8N4S7 273 aaPredicted RBP10.43□□□□□ -0.74
TOP3A-215ENST00000583328 DEFB108BQ8NET1 73 aa10.43□□□□□ -0.74
TOP3A-215ENST00000583328 GTF3AQ92664 365 aaKnown RBP10.43□□□□□ -0.74
TOP3A-215ENST00000583328 ZNF48Q96MX3 618 aaPredicted RBP10.43□□□□□ -0.74
TOP3A-215ENST00000583328 ZNF607Q96SK3 696 aa10.43□□□□□ -0.74
TOP3A-215ENST00000583328 SPATA5L1Q9BVQ7 753 aa10.43□□□□□ -0.74
TOP3A-215ENST00000583328 MS4A7Q9GZW8 240 aaPredicted RBP10.43□□□□□ -0.74
TOP3A-215ENST00000583328 LRMDAQ9H2I8 198 aa10.43□□□□□ -0.74
TOP3A-215ENST00000583328 MMP26Q9NRE1 261 aa10.43□□□□□ -0.74
TOP3A-215ENST00000583328 IGKV1D-42A0A075B6H8 117 aa10.42□□□□□ -0.74
TOP3A-215ENST00000583328 A0A1B0GWA3 101 aa10.42□□□□□ -0.74
TOP3A-215ENST00000583328 SERPINB7O75635 380 aa10.42□□□□□ -0.74
TOP3A-215ENST00000583328 OMGP23515 440 aa10.42□□□□□ -0.74
TOP3A-215ENST00000583328 AHCYP23526 432 aa10.42□□□□□ -0.74
TOP3A-215ENST00000583328 AQP1P29972 269 aa10.42□□□□□ -0.74
TOP3A-215ENST00000583328 GSK3BP49841 420 aa10.42□□□□□ -0.74
TOP3A-215ENST00000583328 UCP2P55851 309 aa10.42□□□□□ -0.74
TOP3A-215ENST00000583328 PUDPQ08623 228 aa10.42□□□□□ -0.74
TOP3A-215ENST00000583328 ZNF154Q13106 437 aa10.42□□□□□ -0.74
TOP3A-215ENST00000583328 SLC9A3R2Q15599 337 aa10.42□□□□□ -0.74
TOP3A-215ENST00000583328 TBC1D28Q2M2D7 210 aa10.42□□□□□ -0.74
TOP3A-215ENST00000583328 KLF17Q5JT82 389 aaPredicted RBP10.42□□□□□ -0.74
TOP3A-215ENST00000583328 FAM209AQ5JX71 171 aa10.42□□□□□ -0.74
TOP3A-215ENST00000583328 TMEM53Q6P2H8 277 aa10.42□□□□□ -0.74
TOP3A-215ENST00000583328 PATL1Q86TB9 770 aaKnown RBP10.42□□□□□ -0.74
TOP3A-215ENST00000583328 MICU2Q8IYU8 434 aa10.42□□□□□ -0.74
TOP3A-215ENST00000583328 DEFB107AQ8IZN7 70 aa10.42□□□□□ -0.74
TOP3A-215ENST00000583328 SLC22A24Q8N4F4 322 aa10.42□□□□□ -0.74
TOP3A-215ENST00000583328 RBM15BQ8NDT2 890 aaKnown RBP10.42□□□□□ -0.74
TOP3A-215ENST00000583328 OR1J2Q8NGS2 313 aa10.42□□□□□ -0.74
TOP3A-215ENST00000583328 TMIGD2Q96BF3 282 aa10.42□□□□□ -0.74
TOP3A-215ENST00000583328 SLC41A3Q96GZ6 507 aa10.42□□□□□ -0.74
TOP3A-215ENST00000583328 SH3GL3Q99963 347 aa10.42□□□□□ -0.74
TOP3A-215ENST00000583328 BCL2L14Q9BZR8 327 aa10.42□□□□□ -0.74
TOP3A-215ENST00000583328 C1orf21Q9H246 121 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms