RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 MED4Q9NPJ6 270 aa18.26■□□□□ 0.51
CSNK1D-216ENST00000581108 ZNF346Q9UL40 294 aaKnown RBP18.26■□□□□ 0.51
CSNK1D-216ENST00000581108 IQCMA0A1B0GVH7 501 aa18.25■□□□□ 0.51
CSNK1D-216ENST00000581108 A0A1W2PPW3 197 aa18.25■□□□□ 0.51
CSNK1D-216ENST00000581108 SLC22A23A1A5C7 686 aa18.25■□□□□ 0.51
CSNK1D-216ENST00000581108 HTR3EA5X5Y0 456 aa18.25■□□□□ 0.51
CSNK1D-216ENST00000581108 PTHP01270 115 aa18.25■□□□□ 0.51
CSNK1D-216ENST00000581108 APEX1P27695 318 aaKnown RBP18.25■□□□□ 0.51
CSNK1D-216ENST00000581108 CHN2P52757 468 aa18.25■□□□□ 0.51
CSNK1D-216ENST00000581108 CTXN1P60606 82 aa18.25■□□□□ 0.51
CSNK1D-216ENST00000581108 RPL27P61353 136 aaKnown RBP18.25■□□□□ 0.51
CSNK1D-216ENST00000581108 ERVS71-1P61550 626 aa18.25■□□□□ 0.51
CSNK1D-216ENST00000581108 CD47Q08722 323 aa18.25■□□□□ 0.51
CSNK1D-216ENST00000581108 TRAM2Q15035 370 aa18.25■□□□□ 0.51
CSNK1D-216ENST00000581108 SGCAQ16586 387 aa18.25■□□□□ 0.51
CSNK1D-216ENST00000581108 TBC1D28Q2M2D7 210 aa18.25■□□□□ 0.51
CSNK1D-216ENST00000581108 ALKBH6Q3KRA9 238 aa18.25■□□□□ 0.51
CSNK1D-216ENST00000581108 PABPC1L2AQ5JQF8 200 aa18.25■□□□□ 0.51
CSNK1D-216ENST00000581108 FAM120AOSQ5T036 256 aa18.25■□□□□ 0.51
CSNK1D-216ENST00000581108 SLC25A47Q6Q0C1 308 aa18.25■□□□□ 0.51
CSNK1D-216ENST00000581108 OFCC1Q8IZS5 231 aa18.25■□□□□ 0.51
CSNK1D-216ENST00000581108 CPEB3Q8NE35 698 aaKnown RBP18.25■□□□□ 0.51
CSNK1D-216ENST00000581108 OR51A7Q8NH64 312 aa18.25■□□□□ 0.51
CSNK1D-216ENST00000581108 NABP1Q96AH0 204 aa18.25■□□□□ 0.51
CSNK1D-216ENST00000581108 SMURF2Q9HAU4 748 aa18.25■□□□□ 0.51
CSNK1D-216ENST00000581108 STAB1Q9NY15 2570 aa18.24■□□□□ 0.51
CSNK1D-216ENST00000581108 TRAV27A0A087WT01 109 aa18.24■□□□□ 0.51
CSNK1D-216ENST00000581108 RNF212BA8MTL3 300 aa18.24■□□□□ 0.51
CSNK1D-216ENST00000581108 MGRN1O60291 552 aa18.24■□□□□ 0.51
CSNK1D-216ENST00000581108 SNAP29O95721 258 aa18.24■□□□□ 0.51
CSNK1D-216ENST00000581108 LCKP06239 509 aa18.24■□□□□ 0.51
CSNK1D-216ENST00000581108 SAGP10523 405 aaPredicted RBP18.24■□□□□ 0.51
CSNK1D-216ENST00000581108 GSK3BP49841 420 aa18.24■□□□□ 0.51
CSNK1D-216ENST00000581108 UCP2P55851 309 aa18.24■□□□□ 0.51
CSNK1D-216ENST00000581108 HSF2Q03933 536 aa18.24■□□□□ 0.51
CSNK1D-216ENST00000581108 PRKCDQ05655 676 aa18.24■□□□□ 0.51
CSNK1D-216ENST00000581108 FHL1Q13642 323 aa18.24■□□□□ 0.51
CSNK1D-216ENST00000581108 TAF11Q15544 211 aa18.24■□□□□ 0.51
CSNK1D-216ENST00000581108 IFI44LQ53G44 452 aa18.24■□□□□ 0.51
CSNK1D-216ENST00000581108 TBPL2Q6SJ96 375 aa18.24■□□□□ 0.51
CSNK1D-216ENST00000581108 FKBP9P1Q75LS8 142 aa18.24■□□□□ 0.51
CSNK1D-216ENST00000581108 CBLL1Q75N03 491 aa18.24■□□□□ 0.51
CSNK1D-216ENST00000581108 LRRC75AQ8NAA5 344 aa18.24■□□□□ 0.51
CSNK1D-216ENST00000581108 OR1J2Q8NGS2 313 aa18.24■□□□□ 0.51
CSNK1D-216ENST00000581108 SYNPRQ8TBG9 265 aa18.24■□□□□ 0.51
CSNK1D-216ENST00000581108 GEMIN6Q8WXD5 167 aaKnown RBP18.24■□□□□ 0.51
CSNK1D-216ENST00000581108 TSPAN32Q96QS1 320 aa18.24■□□□□ 0.51
CSNK1D-216ENST00000581108 LRMDAQ9H2I8 198 aa18.24■□□□□ 0.51
CSNK1D-216ENST00000581108 KCNN2Q9H2S1 579 aa18.24■□□□□ 0.51
CSNK1D-216ENST00000581108 TAAR3PQ9P1P4 343 aa18.24■□□□□ 0.51
CSNK1D-216ENST00000581108 EFCAB9A8MZ26 197 aa18.23■□□□□ 0.51
CSNK1D-216ENST00000581108 SERPINA1P01009 418 aa18.23■□□□□ 0.51
CSNK1D-216ENST00000581108 ZNF250P15622 560 aa18.23■□□□□ 0.51
CSNK1D-216ENST00000581108 ZNF32P17041 273 aa18.23■□□□□ 0.51
CSNK1D-216ENST00000581108 RAD52P43351 418 aa18.23■□□□□ 0.51
CSNK1D-216ENST00000581108 NKPD1Q17RQ9 610 aa18.23■□□□□ 0.51
CSNK1D-216ENST00000581108 OAFQ86UD1 273 aa18.23■□□□□ 0.51
CSNK1D-216ENST00000581108 ICA1LQ8NDH6 482 aa18.23■□□□□ 0.51
CSNK1D-216ENST00000581108 ZNF519Q8TB69 540 aa18.23■□□□□ 0.51
CSNK1D-216ENST00000581108 RDH5Q92781 318 aa18.23■□□□□ 0.51
CSNK1D-216ENST00000581108 HPS1Q92902 700 aa18.23■□□□□ 0.51
CSNK1D-216ENST00000581108 HSH2DQ96JZ2 352 aa18.23■□□□□ 0.51
CSNK1D-216ENST00000581108 RBP7Q96R05 134 aa18.23■□□□□ 0.51
CSNK1D-216ENST00000581108 CCNB1IP1Q9NPC3 277 aa18.23■□□□□ 0.51
CSNK1D-216ENST00000581108 IGLV3-9A0A075B6K5 115 aa18.22■□□□□ 0.51
CSNK1D-216ENST00000581108 A0A087WUU8 490 aa18.22■□□□□ 0.51
CSNK1D-216ENST00000581108 PHF1O43189 567 aaPredicted RBP18.22■□□□□ 0.51
CSNK1D-216ENST00000581108 NCR1O76036 304 aa18.22■□□□□ 0.51
CSNK1D-216ENST00000581108 PRSS23O95084 383 aa18.22■□□□□ 0.51
CSNK1D-216ENST00000581108 IGHMP01871 453 aa18.22■□□□□ 0.51
CSNK1D-216ENST00000581108 NCK1P16333 377 aa18.22■□□□□ 0.51
CSNK1D-216ENST00000581108 CCNOP22674 350 aa18.22■□□□□ 0.51
CSNK1D-216ENST00000581108 STOMP27105 288 aa18.22■□□□□ 0.51
CSNK1D-216ENST00000581108 APLNRP35414 380 aa18.22■□□□□ 0.51
CSNK1D-216ENST00000581108 NUDT2P50583 147 aa18.22■□□□□ 0.51
CSNK1D-216ENST00000581108 KLF3P57682 345 aaPredicted RBP18.22■□□□□ 0.51
CSNK1D-216ENST00000581108 SELENOVP59797 346 aa18.22■□□□□ 0.51
CSNK1D-216ENST00000581108 THEM4Q5T1C6 240 aa18.22■□□□□ 0.51
CSNK1D-216ENST00000581108 FAM27BQ5VT28 67 aa18.22■□□□□ 0.51
CSNK1D-216ENST00000581108 HACD2Q6Y1H2 254 aa18.22■□□□□ 0.51
CSNK1D-216ENST00000581108 ZNF730Q6ZMV8 503 aa18.22■□□□□ 0.51
CSNK1D-216ENST00000581108 TSEN54Q7Z6J9 526 aaKnown RBP18.22■□□□□ 0.51
CSNK1D-216ENST00000581108 RNF113BQ8IZP6 322 aaKnown RBP18.22■□□□□ 0.51
CSNK1D-216ENST00000581108 OR13C2Q8NGS9 318 aa18.22■□□□□ 0.51
CSNK1D-216ENST00000581108 ACOT11Q8WXI4 607 aaPredicted RBP18.22■□□□□ 0.51
CSNK1D-216ENST00000581108 C11orf40Q8WZ69 217 aa18.22■□□□□ 0.51
CSNK1D-216ENST00000581108 YIPF5Q969M3 257 aa18.22■□□□□ 0.51
CSNK1D-216ENST00000581108 ELAC2Q9BQ52 826 aaKnown RBP18.22■□□□□ 0.51
CSNK1D-216ENST00000581108 ALG12Q9BV10 488 aa18.22■□□□□ 0.51
CSNK1D-216ENST00000581108 BCL2L14Q9BZR8 327 aa18.22■□□□□ 0.51
CSNK1D-216ENST00000581108 NR2C1P13056 603 aa18.21■□□□□ 0.51
CSNK1D-216ENST00000581108 SRD5A1P18405 259 aa18.21■□□□□ 0.51
CSNK1D-216ENST00000581108 MAGEB1P43366 347 aa18.21■□□□□ 0.51
CSNK1D-216ENST00000581108 ERVK-25P63136 954 aa18.21■□□□□ 0.51
CSNK1D-216ENST00000581108 PSG4Q00888 419 aa18.21■□□□□ 0.51
CSNK1D-216ENST00000581108 CCNIQ14094 377 aa18.21■□□□□ 0.51
CSNK1D-216ENST00000581108 CR1LQ2VPA4 569 aa18.21■□□□□ 0.51
CSNK1D-216ENST00000581108 OR1J1Q8NGS3 322 aa18.21■□□□□ 0.51
CSNK1D-216ENST00000581108 AKR7LQ8NHP1 331 aa18.21■□□□□ 0.51
CSNK1D-216ENST00000581108 FAM162AQ96A26 154 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms