RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 CYS1Q717R9 158 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 MTERF4Q7Z6M4 381 aaKnown RBP5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 PATL1Q86TB9 770 aaKnown RBP5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 ZBED8Q8IZ13 594 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 OR4F15Q8NGB8 312 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 OR1K1Q8NGR3 316 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 GRK7Q8WTQ7 553 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 RDH5Q92781 318 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 EGLN2Q96KS0 407 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 COG8Q96MW5 612 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 SHCBP1LQ9BZQ2 653 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 ELOVL6Q9H5J4 265 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 C3orf14Q9HBI5 128 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 SLC52A3Q9NQ40 469 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 GIN1Q9NXP7 522 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 EMC3Q9P0I2 261 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 ARPC4-TTLL3A0A0A6YYG9 625 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 A0A0G2JMP0 313 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 A0A0X1KG70 313 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 TTC36A6NLP5 189 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 TRIM49D1C9J1S8 452 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 PRR23D1E9PI22 279 aaPredicted RBP5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 TRAPPC2LH3BP13 241 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 J3QLI3 93 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 GPR171O14626 319 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 PIN1P1O15428 100 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 SYNGR3O43761 229 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 BCAS1O75363 584 aaPredicted RBP5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 SEC31AO94979 1220 aaKnown RBP5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 LGI1O95970 557 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 RPS17P08708 135 aaKnown RBP5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 IFI6P09912 130 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 PRR23D2P0DMB1 279 aaPredicted RBP5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 SELEP16581 610 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 LCN1P31025 176 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 PCGF2P35227 344 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 HSD17B3P37058 310 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 ARL1P40616 181 aaPredicted RBP5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 MAD2L1BPQ15013 274 aaPredicted RBP5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 SYT14P1Q58G82 188 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 VAX1Q5SQQ9 334 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 ANKRD26P1Q6NSI1 321 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 C3orf33Q6P1S2 294 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 C16orf87Q6PH81 154 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 CASP12Q6UXS9 341 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 IKBIPQ70UQ0 350 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 CDRT4Q8N9R6 151 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 DEFB108BQ8NET1 73 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 OR4M2Q8NGB6 313 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 OR5W2Q8NH69 310 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 RFWD2Q8NHY2 731 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 ACTRT1Q8TDG2 376 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 CIDECQ96AQ7 238 aaPredicted RBP5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 AURKBQ96GD4 344 aaPredicted RBP5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 ZNF75AQ96N20 296 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 ZNF385AQ96PM9 386 aaKnown RBP5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 THUMPD3Q9BV44 507 aaKnown RBP5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 CCDC106Q9BWC9 280 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 OR11A1Q9GZK7 315 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 NPFFR1Q9GZQ6 430 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 HHATLQ9HCP6 504 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 MMP26Q9NRE1 261 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 GIMAP4Q9NUV9 329 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 GRID1Q9ULK0 1009 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 SNX6Q9UNH7 406 aa5.32□□□□□ -1.56
PPP4R1-216ENST00000580283 MDFIC2A0A1B0GVS7 189 aa5.31□□□□□ -1.56
PPP4R1-216ENST00000580283 OR6C65A6NJZ3 312 aa5.31□□□□□ -1.56
PPP4R1-216ENST00000580283 M0QZ24 198 aa5.31□□□□□ -1.56
PPP4R1-216ENST00000580283 PGRMC1O00264 195 aaKnown RBP5.31□□□□□ -1.56
PPP4R1-216ENST00000580283 SLC25A17O43808 307 aa5.31□□□□□ -1.56
PPP4R1-216ENST00000580283 EIF4E2O60573 245 aaKnown RBP5.31□□□□□ -1.56
PPP4R1-216ENST00000580283 SERPINI2O75830 405 aa5.31□□□□□ -1.56
PPP4R1-216ENST00000580283 PMS2P2O95744 297 aa5.31□□□□□ -1.56
PPP4R1-216ENST00000580283 ERCC1P07992 297 aaPredicted RBP5.31□□□□□ -1.56
PPP4R1-216ENST00000580283 FCGR1AP12314 374 aa5.31□□□□□ -1.56
PPP4R1-216ENST00000580283 HSD3B1P14060 373 aa5.31□□□□□ -1.56
PPP4R1-216ENST00000580283 ANPEPP15144 967 aa5.31□□□□□ -1.56
PPP4R1-216ENST00000580283 HPGDP15428 266 aa5.31□□□□□ -1.56
PPP4R1-216ENST00000580283 FRKP42685 505 aaPredicted RBP5.31□□□□□ -1.56
PPP4R1-216ENST00000580283 ALDH3B1P43353 468 aa5.31□□□□□ -1.56
PPP4R1-216ENST00000580283 MAGEB1P43366 347 aa5.31□□□□□ -1.56
PPP4R1-216ENST00000580283 EVX1P49640 407 aa5.31□□□□□ -1.56
PPP4R1-216ENST00000580283 CSNK2A1P68400 391 aaPredicted RBP5.31□□□□□ -1.56
PPP4R1-216ENST00000580283 LCN2P80188 198 aa5.31□□□□□ -1.56
PPP4R1-216ENST00000580283 GUCY2DQ02846 1103 aa5.31□□□□□ -1.56
PPP4R1-216ENST00000580283 TGFBR3Q03167 851 aa5.31□□□□□ -1.56
PPP4R1-216ENST00000580283 MERTKQ12866 999 aa5.31□□□□□ -1.56
PPP4R1-216ENST00000580283 ILF2Q12905 390 aaKnown RBP5.31□□□□□ -1.56
PPP4R1-216ENST00000580283 HSPB3Q12988 150 aa5.31□□□□□ -1.56
PPP4R1-216ENST00000580283 SKP2Q13309 424 aa5.31□□□□□ -1.56
PPP4R1-216ENST00000580283 IZUMO4Q1ZYL8 232 aa5.31□□□□□ -1.56
PPP4R1-216ENST00000580283 FAM83EQ2M2I3 478 aa5.31□□□□□ -1.56
PPP4R1-216ENST00000580283 ZNF311Q5JNZ3 666 aa5.31□□□□□ -1.56
PPP4R1-216ENST00000580283 OLFML2AQ68BL7 652 aa5.31□□□□□ -1.56
PPP4R1-216ENST00000580283 KRT80Q6KB66 452 aa5.31□□□□□ -1.56
PPP4R1-216ENST00000580283 CCBE1Q6UXH8 406 aaPredicted RBP5.31□□□□□ -1.56
PPP4R1-216ENST00000580283 C18orf65Q6ZTR6 163 aa5.31□□□□□ -1.56
PPP4R1-216ENST00000580283 C3orf62Q6ZUJ4 267 aa5.31□□□□□ -1.56
PPP4R1-216ENST00000580283 CREB3L2Q70SY1 520 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms