RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 SH3PXD2BA1X283 911 aa12.41□□□□□ -0.42
SMARCE1-213ENST00000578044 A6NIZ1 184 aa12.41□□□□□ -0.42
SMARCE1-213ENST00000578044 MT-ND5P03915 603 aa12.41□□□□□ -0.42
SMARCE1-213ENST00000578044 F13BP05160 661 aa12.41□□□□□ -0.42
SMARCE1-213ENST00000578044 AQP2P41181 271 aa12.41□□□□□ -0.42
SMARCE1-213ENST00000578044 CRYBB2P43320 205 aa12.41□□□□□ -0.42
SMARCE1-213ENST00000578044 RAP1BP61224 184 aa12.41□□□□□ -0.42
SMARCE1-213ENST00000578044 RPL27P61353 136 aaKnown RBP12.41□□□□□ -0.42
SMARCE1-213ENST00000578044 PCBD1P61457 104 aa12.41□□□□□ -0.42
SMARCE1-213ENST00000578044 RAP1AP62834 184 aa12.41□□□□□ -0.42
SMARCE1-213ENST00000578044 RUNX1T1Q06455 604 aa12.41□□□□□ -0.42
SMARCE1-213ENST00000578044 SCGB2A2Q13296 93 aa12.41□□□□□ -0.42
SMARCE1-213ENST00000578044 CR1LQ2VPA4 569 aa12.41□□□□□ -0.42
SMARCE1-213ENST00000578044 ALG10Q5BKT4 473 aa12.41□□□□□ -0.42
SMARCE1-213ENST00000578044 LIPNQ5VXI9 398 aa12.41□□□□□ -0.42
SMARCE1-213ENST00000578044 CGB2Q6NT52 195 aa12.41□□□□□ -0.42
SMARCE1-213ENST00000578044 C8orf82Q6P1X6 216 aaPredicted RBP12.41□□□□□ -0.42
SMARCE1-213ENST00000578044 SLC25A47Q6Q0C1 308 aa12.41□□□□□ -0.42
SMARCE1-213ENST00000578044 HACD2Q6Y1H2 254 aa12.41□□□□□ -0.42
SMARCE1-213ENST00000578044 PFN4Q8NHR9 129 aa12.41□□□□□ -0.42
SMARCE1-213ENST00000578044 NABP1Q96AH0 204 aa12.41□□□□□ -0.42
SMARCE1-213ENST00000578044 BPIFA2Q96DR5 249 aa12.41□□□□□ -0.42
SMARCE1-213ENST00000578044 RBP7Q96R05 134 aa12.41□□□□□ -0.42
SMARCE1-213ENST00000578044 SYT3Q9BQG1 590 aa12.41□□□□□ -0.42
SMARCE1-213ENST00000578044 RNF121Q9H920 327 aa12.41□□□□□ -0.42
SMARCE1-213ENST00000578044 HINT3Q9NQE9 182 aaKnown RBP12.41□□□□□ -0.42
SMARCE1-213ENST00000578044 TMEFF2Q9UIK5 374 aaPredicted RBP12.41□□□□□ -0.42
SMARCE1-213ENST00000578044 NBEAL1Q6ZS30 2694 aa12.4□□□□□ -0.42
SMARCE1-213ENST00000578044 LRP5LA4QPB2 252 aa12.4□□□□□ -0.42
SMARCE1-213ENST00000578044 CCDC22O60826 627 aa12.4□□□□□ -0.42
SMARCE1-213ENST00000578044 HPXP02790 462 aa12.4□□□□□ -0.42
SMARCE1-213ENST00000578044 CST2P09228 141 aa12.4□□□□□ -0.42
SMARCE1-213ENST00000578044 COX5BP10606 129 aa12.4□□□□□ -0.42
SMARCE1-213ENST00000578044 ANPEPP15144 967 aa12.4□□□□□ -0.42
SMARCE1-213ENST00000578044 APLNRP35414 380 aa12.4□□□□□ -0.42
SMARCE1-213ENST00000578044 GPR6P46095 362 aaPredicted RBP12.4□□□□□ -0.42
SMARCE1-213ENST00000578044 PRKCDQ05655 676 aa12.4□□□□□ -0.42
SMARCE1-213ENST00000578044 TRAM2Q15035 370 aa12.4□□□□□ -0.42
SMARCE1-213ENST00000578044 SLC15A3Q8IY34 581 aa12.4□□□□□ -0.42
SMARCE1-213ENST00000578044 ALDH16A1Q8IZ83 802 aa12.4□□□□□ -0.42
SMARCE1-213ENST00000578044 ARIH2OSQ8N7S6 290 aa12.4□□□□□ -0.42
SMARCE1-213ENST00000578044 LRRC75AQ8NAA5 344 aa12.4□□□□□ -0.42
SMARCE1-213ENST00000578044 SNX33Q8WV41 574 aa12.4□□□□□ -0.42
SMARCE1-213ENST00000578044 ZFAND2BQ8WV99 257 aa12.4□□□□□ -0.42
SMARCE1-213ENST00000578044 GEMIN6Q8WXD5 167 aaKnown RBP12.4□□□□□ -0.42
SMARCE1-213ENST00000578044 ACOT11Q8WXI4 607 aaPredicted RBP12.4□□□□□ -0.42
SMARCE1-213ENST00000578044 POM121L2Q96KW2 1035 aa12.4□□□□□ -0.42
SMARCE1-213ENST00000578044 SOX7Q9BT81 388 aa12.4□□□□□ -0.42
SMARCE1-213ENST00000578044 CYSLTR2Q9NS75 346 aa12.4□□□□□ -0.42
SMARCE1-213ENST00000578044 DUSP13Q9UII6 198 aa12.4□□□□□ -0.42
SMARCE1-213ENST00000578044 LOC100653049A0A140TA62 436 aa12.39□□□□□ -0.43
SMARCE1-213ENST00000578044 A0A1W2PPW3 197 aa12.39□□□□□ -0.43
SMARCE1-213ENST00000578044 KRT34O76011 436 aa12.39□□□□□ -0.43
SMARCE1-213ENST00000578044 IFNW1P05000 195 aa12.39□□□□□ -0.43
SMARCE1-213ENST00000578044 PATE4P0C8F1 98 aa12.39□□□□□ -0.43
SMARCE1-213ENST00000578044 STOMP27105 288 aa12.39□□□□□ -0.43
SMARCE1-213ENST00000578044 GUCA1AP43080 201 aaPredicted RBP12.39□□□□□ -0.43
SMARCE1-213ENST00000578044 ALDH3B1P43353 468 aa12.39□□□□□ -0.43
SMARCE1-213ENST00000578044 OR1E2P47887 323 aa12.39□□□□□ -0.43
SMARCE1-213ENST00000578044 NKPD1Q17RQ9 610 aa12.39□□□□□ -0.43
SMARCE1-213ENST00000578044 ZNF718Q3SXZ3 478 aa12.39□□□□□ -0.43
SMARCE1-213ENST00000578044 PABPC1L2AQ5JQF8 200 aa12.39□□□□□ -0.43
SMARCE1-213ENST00000578044 MBNL2Q5VZF2 373 aaKnown RBP12.39□□□□□ -0.43
SMARCE1-213ENST00000578044 TMEM154Q6P9G4 183 aa12.39□□□□□ -0.43
SMARCE1-213ENST00000578044 TMPRSS11FQ6ZWK6 438 aa12.39□□□□□ -0.43
SMARCE1-213ENST00000578044 GLCCI1Q86VQ1 547 aa12.39□□□□□ -0.43
SMARCE1-213ENST00000578044 LRP11Q86VZ4 500 aa12.39□□□□□ -0.43
SMARCE1-213ENST00000578044 PAQR4Q8N4S7 273 aaPredicted RBP12.39□□□□□ -0.43
SMARCE1-213ENST00000578044 SYT14Q8NB59 555 aa12.39□□□□□ -0.43
SMARCE1-213ENST00000578044 CPEB3Q8NE35 698 aaKnown RBP12.39□□□□□ -0.43
SMARCE1-213ENST00000578044 HDAC2Q92769 488 aaKnown RBP12.39□□□□□ -0.43
SMARCE1-213ENST00000578044 SNX18Q96RF0 628 aa12.39□□□□□ -0.43
SMARCE1-213ENST00000578044 DIRC2Q96SL1 478 aa12.39□□□□□ -0.43
SMARCE1-213ENST00000578044 TPK1Q9H3S4 243 aa12.39□□□□□ -0.43
SMARCE1-213ENST00000578044 CCNB1IP1Q9NPC3 277 aa12.39□□□□□ -0.43
SMARCE1-213ENST00000578044 MED4Q9NPJ6 270 aa12.39□□□□□ -0.43
SMARCE1-213ENST00000578044 MAN2C1Q9NTJ4 1040 aa12.39□□□□□ -0.43
SMARCE1-213ENST00000578044 TAAR3PQ9P1P4 343 aa12.39□□□□□ -0.43
SMARCE1-213ENST00000578044 MYEF2Q9P2K5 600 aaKnown RBP12.39□□□□□ -0.43
SMARCE1-213ENST00000578044 EIF3KQ9UBQ5 218 aaKnown RBP12.39□□□□□ -0.43
SMARCE1-213ENST00000578044 TIMM10BQ9Y5J6 103 aa12.39□□□□□ -0.43
SMARCE1-213ENST00000578044 TANC2Q9HCD6 1990 aa12.38□□□□□ -0.43
SMARCE1-213ENST00000578044 TRAV20A0A0B4J274 112 aa12.38□□□□□ -0.43
SMARCE1-213ENST00000578044 J3QW42 95 aa12.38□□□□□ -0.43
SMARCE1-213ENST00000578044 PRSS23O95084 383 aa12.38□□□□□ -0.43
SMARCE1-213ENST00000578044 SAGP10523 405 aaPredicted RBP12.38□□□□□ -0.43
SMARCE1-213ENST00000578044 TNFRSF1BP20333 461 aa12.38□□□□□ -0.43
SMARCE1-213ENST00000578044 COL8A2P25067 703 aa12.38□□□□□ -0.43
SMARCE1-213ENST00000578044 IL2RGP31785 369 aa12.38□□□□□ -0.43
SMARCE1-213ENST00000578044 SEC24CP53992 1094 aa12.38□□□□□ -0.43
SMARCE1-213ENST00000578044 HSF2Q03933 536 aa12.38□□□□□ -0.43
SMARCE1-213ENST00000578044 FHL1Q13642 323 aa12.38□□□□□ -0.43
SMARCE1-213ENST00000578044 LAPTM4AQ15012 233 aa12.38□□□□□ -0.43
SMARCE1-213ENST00000578044 KRTAP24-1Q3LI83 254 aa12.38□□□□□ -0.43
SMARCE1-213ENST00000578044 LRRC23Q53EV4 343 aaPredicted RBP12.38□□□□□ -0.43
SMARCE1-213ENST00000578044 CBLL1Q75N03 491 aa12.38□□□□□ -0.43
SMARCE1-213ENST00000578044 MOSPD2Q8NHP6 518 aa12.38□□□□□ -0.43
SMARCE1-213ENST00000578044 FNDC11Q9BVV2 318 aa12.38□□□□□ -0.43
SMARCE1-213ENST00000578044 REPIN1Q9BWE0 567 aaKnown RBP12.38□□□□□ -0.43
SMARCE1-213ENST00000578044 NDEL1Q9GZM8 345 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms