RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 FGF1P05230 155 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 S100A9P06702 114 aaKnown RBP1.71□□□□□ -2.14
COPS3-213ENST00000577210 CLTAP09496 248 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 DUX4L2P0CJ85 424 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 DUX4L3P0CJ86 424 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 DUX4L5P0CJ88 424 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 DUX4L6P0CJ89 424 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 DUX4L7P0CJ90 424 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 STAG3L2P0CL84 134 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 CRISP2P16562 243 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 TCN1P20061 433 aaPredicted RBP1.71□□□□□ -2.14
COPS3-213ENST00000577210 PTNP21246 168 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 MSR1P21757 451 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 BMI1P35226 326 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 NUDT1P36639 197 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 PAX5Q02548 391 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 ACVR1Q04771 509 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 REG3AQ06141 175 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 TMED1Q13445 227 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 HERPUD1Q15011 391 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 DUX4L9Q6RFH8 374 aaPredicted RBP1.71□□□□□ -2.14
COPS3-213ENST00000577210 C6orf89Q6UWU4 347 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 C6orf120Q7Z4R8 191 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 CMC1Q7Z7K0 106 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 ZNF557Q8N988 423 aaPredicted RBP1.71□□□□□ -2.14
COPS3-213ENST00000577210 TTC29Q8NA56 475 aaPredicted RBP1.71□□□□□ -2.14
COPS3-213ENST00000577210 C20orf203Q8NBC4 194 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 SUMF2Q8NBJ7 301 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 OR9G4Q8NGQ1 327 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 DTX3LQ8TDB6 740 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 SDR42E1Q8WUS8 393 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 FAM151AQ8WW52 585 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 PIBF1Q8WXW3 757 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 EEF1AKMT3Q96AZ1 226 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 CERS2Q96G23 380 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 SH3GL1Q99961 368 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 UCK2Q9BZX2 261 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 ACTR3CQ9C0K3 210 aaPredicted RBP1.71□□□□□ -2.14
COPS3-213ENST00000577210 SLC7A5P2Q9GIP4 190 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 NAA50Q9GZZ1 169 aaKnown RBP1.71□□□□□ -2.14
COPS3-213ENST00000577210 C20orf85Q9H1P6 137 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 PIGUQ9H490 435 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 CLMPQ9H6B4 373 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 SIAEQ9HAT2 523 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 DYRK4Q9NR20 520 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 PLSCR3Q9NRY6 295 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 GPATCH2LQ9NWQ4 482 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 QPCTLQ9NXS2 382 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 MYEF2Q9P2K5 600 aaKnown RBP1.71□□□□□ -2.14
COPS3-213ENST00000577210 PEF1Q9UBV8 284 aaKnown RBP1.71□□□□□ -2.14
COPS3-213ENST00000577210 DUX4Q9UBX2 424 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 MTRF1LQ9UGC7 380 aaKnown RBP1.71□□□□□ -2.14
COPS3-213ENST00000577210 GOLT1BQ9Y3E0 138 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 CACNG2Q9Y698 323 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 COMMD3-BMI1R4GMX3 469 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 PDS5BQ9NTI5 1447 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 ADAMTS9Q9P2N4 1935 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 CFAP65Q6ZU64 1925 aaKnown RBP1.7□□□□□ -2.14
COPS3-213ENST00000577210 KCNE1BA0A087WTH5 132 aa1.7□□□□□ -2.14
COPS3-213ENST00000577210 IGKV1D-13A0A0B4J2D9 117 aa1.7□□□□□ -2.14
COPS3-213ENST00000577210 KBTBD11-OT1A0A1B0GTJ5 212 aa1.7□□□□□ -2.14
COPS3-213ENST00000577210 CIB4A0PJX0 185 aa1.7□□□□□ -2.14
COPS3-213ENST00000577210 TMEM120BA0PK00 339 aa1.7□□□□□ -2.14
COPS3-213ENST00000577210 PRSS37A4D1T9 235 aa1.7□□□□□ -2.14
COPS3-213ENST00000577210 ERVV-1B6SEH8 477 aa1.7□□□□□ -2.14
COPS3-213ENST00000577210 C12orf77C9JDV5 145 aa1.7□□□□□ -2.14
COPS3-213ENST00000577210 H3BNH8 94 aa1.7□□□□□ -2.14
COPS3-213ENST00000577210 ZNF701M0R085 212 aaPredicted RBP1.7□□□□□ -2.14
COPS3-213ENST00000577210 XKRYO14609 159 aa1.7□□□□□ -2.14
COPS3-213ENST00000577210 NVLO15381 856 aaKnown RBP1.7□□□□□ -2.14
COPS3-213ENST00000577210 MAGEB4O15481 346 aaPredicted RBP1.7□□□□□ -2.14
COPS3-213ENST00000577210 CLDN11O75508 207 aa1.7□□□□□ -2.14
COPS3-213ENST00000577210 EEDO75530 441 aaKnown RBP1.7□□□□□ -2.14
COPS3-213ENST00000577210 EIF3GO75821 320 aaKnown RBP eCLIP1.7□□□□□ -2.14
COPS3-213ENST00000577210 INSP01308 110 aa1.7□□□□□ -2.14
COPS3-213ENST00000577210 KRT16P08779 473 aa1.7□□□□□ -2.14
COPS3-213ENST00000577210 IGKV1-13P0DP09 117 aa1.7□□□□□ -2.14
COPS3-213ENST00000577210 CALM1P0DP23 149 aa1.7□□□□□ -2.14
COPS3-213ENST00000577210 CALM2P0DP24 149 aa1.7□□□□□ -2.14
COPS3-213ENST00000577210 CALM3P0DP25 149 aa1.7□□□□□ -2.14
COPS3-213ENST00000577210 FOLR1P15328 257 aa1.7□□□□□ -2.14
COPS3-213ENST00000577210 PRKACAP17612 351 aa1.7□□□□□ -2.14
COPS3-213ENST00000577210 U2AF2P26368 475 aaKnown RBP eCLIP1.7□□□□□ -2.14
COPS3-213ENST00000577210 GPR1P46091 355 aa1.7□□□□□ -2.14
COPS3-213ENST00000577210 GPR6P46095 362 aaPredicted RBP1.7□□□□□ -2.14
COPS3-213ENST00000577210 YAP1P46937 504 aaKnown RBP1.7□□□□□ -2.14
COPS3-213ENST00000577210 NPBWR2P48146 333 aa1.7□□□□□ -2.14
COPS3-213ENST00000577210 TFPI2P48307 235 aa1.7□□□□□ -2.14
COPS3-213ENST00000577210 UGT2B15P54855 530 aa1.7□□□□□ -2.14
COPS3-213ENST00000577210 PSMD4P55036 377 aaKnown RBP1.7□□□□□ -2.14
COPS3-213ENST00000577210 STXBP1P61764 594 aaKnown RBP1.7□□□□□ -2.14
COPS3-213ENST00000577210 NUTF2P61970 127 aaKnown RBP1.7□□□□□ -2.14
COPS3-213ENST00000577210 RPS15AP62244 130 aaKnown RBP1.7□□□□□ -2.14
COPS3-213ENST00000577210 RAD51Q06609 339 aa1.7□□□□□ -2.14
COPS3-213ENST00000577210 ZNF763Q0D2J5 394 aa1.7□□□□□ -2.14
COPS3-213ENST00000577210 TWF1Q12792 350 aa1.7□□□□□ -2.14
COPS3-213ENST00000577210 MAB21L1Q13394 359 aa1.7□□□□□ -2.14
COPS3-213ENST00000577210 AQP6Q13520 282 aa1.7□□□□□ -2.14
COPS3-213ENST00000577210 FZD2Q14332 565 aa1.7□□□□□ -2.14
COPS3-213ENST00000577210 GGTLC2Q14390 218 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms