RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 TMEM59Q9BXS4 323 aa16.32■□□□□ 0.2
ATPAF1-214ENST00000576409 TET1Q8NFU7 2136 aa16.32■□□□□ 0.2
ATPAF1-214ENST00000576409 DBHP09172 617 aa16.32■□□□□ 0.2
ATPAF1-214ENST00000576409 PDZK1IP1Q13113 114 aa16.32■□□□□ 0.2
ATPAF1-214ENST00000576409 ZNF674Q2M3X9 581 aa16.32■□□□□ 0.2
ATPAF1-214ENST00000576409 PRAMEF20Q5VT98 475 aa16.32■□□□□ 0.2
ATPAF1-214ENST00000576409 PRSS42Q7Z5A4 293 aa16.32■□□□□ 0.2
ATPAF1-214ENST00000576409 C16orf52Q8NHV5 167 aa16.32■□□□□ 0.2
ATPAF1-214ENST00000576409 PTP4A1Q93096 173 aa16.32■□□□□ 0.2
ATPAF1-214ENST00000576409 SGCZQ96LD1 299 aa16.32■□□□□ 0.2
ATPAF1-214ENST00000576409 GDE1Q9NZC3 331 aa16.32■□□□□ 0.2
ATPAF1-214ENST00000576409 MOKQ9UQ07 419 aa16.32■□□□□ 0.2
ATPAF1-214ENST00000576409 EFCAB7A8K855 629 aa16.32■□□□□ 0.2
ATPAF1-214ENST00000576409 RABIFP47224 123 aa16.32■□□□□ 0.2
ATPAF1-214ENST00000576409 SNTB1Q13884 538 aaKnown RBP16.32■□□□□ 0.2
ATPAF1-214ENST00000576409 TMEM81Q6P7N7 255 aa16.32■□□□□ 0.2
ATPAF1-214ENST00000576409 C9orf62Q8N4C0 152 aa16.32■□□□□ 0.2
ATPAF1-214ENST00000576409 OR2G2Q8NGZ5 317 aa16.32■□□□□ 0.2
ATPAF1-214ENST00000576409 SORCS2Q96PQ0 1159 aa16.32■□□□□ 0.2
ATPAF1-214ENST00000576409 KCND3Q9UK17 655 aa16.32■□□□□ 0.2
ATPAF1-214ENST00000576409 SLC22A23A1A5C7 686 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 PMS2P2O95744 297 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 CD80P33681 288 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 DUSP2Q05923 314 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 SLC2A12Q8TD20 617 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 GPR119Q8TDV5 335 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 PPP1R1CQ8WVI7 109 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 MR1Q95460 341 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 NKX6-2Q9C056 277 aaPredicted RBP16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 OR51B6Q9H340 312 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 MRPS2Q9Y399 296 aaKnown RBP16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 PPIL1Q9Y3C6 166 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 SLC22A7Q9Y694 548 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 SULT1B1O43704 296 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 ATG12O94817 140 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 BIDP55957 195 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 ACKR1Q16570 336 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 OR14K1Q8NGZ2 314 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 TAS2R5Q9NYW4 299 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 ZNF223Q9UK11 482 aaPredicted RBP16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 KCNS2Q9ULS6 477 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 TMED7-TICAM2A0A0A6YYA0 188 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 A0A1B0GUH1 482 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 OR6C68A6NDL8 312 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 K7EPK0 472 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 CTSVO60911 334 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 KLK3P07288 261 aaPredicted RBP16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 OR4E1P0C645 316 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 SLC6A8P48029 635 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 IAH1Q2TAA2 248 aaPredicted RBP16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 RNF165Q6ZSG1 346 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 FAM71E2Q8N5Q1 922 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 SUMF1Q8NBK3 374 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 TCEAL3Q969E4 200 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 CXorf58Q96LI9 332 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 ASB16Q96NS5 453 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 ARPC5LQ9BPX5 153 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 TCEAL2Q9H3H9 227 aaPredicted RBP16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 SLCO1C1Q9NYB5 712 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 TMED7Q9Y3B3 224 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 PCDHGA1Q9Y5H4 931 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 URGCP-MRPS24S4R325 110 aa16.31■□□□□ 0.2
ATPAF1-214ENST00000576409 CENPVL1A0A0U1RR11 272 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 FAM221BA6H8Z2 402 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 SULT2B1O00204 365 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 ADRB1P08588 477 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 ZNF93P35789 620 aaPredicted RBP16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 LGALSLQ3ZCW2 172 aaPredicted RBP16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 CLLU1Q5K131 121 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 C19orf47Q8N9M1 422 aaKnown RBP16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 MRGPRX3Q96LB0 322 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 LINC00052Q96N35 136 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 SLC6A18Q96N87 628 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 SLC25A21Q9BQT8 299 aaPredicted RBP16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 PPP1R3EQ9H7J1 279 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 KIR2DS5A0A0G2JLQ3 304 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 A0A0G2JNG1 304 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 OR6C65A6NJZ3 312 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 KIR2DS3K7RE56 304 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 TO15178 435 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 CLINT1Q14677 625 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 KIR2DS5Q14953 304 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 DNTTIP1Q9H147 329 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 GMEB2Q9UKD1 530 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 CSAG2Q9Y5P2 127 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 ETV7Q9Y603 341 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 AKAP6Q13023 2319 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 TMEM176BQ3YBM2 270 aaPredicted RBP16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 C9orf135Q5VTT2 229 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 OR52W1Q6IF63 320 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 SCGB1C1Q8TD33 95 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 MED29Q9NX70 200 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 OR52A1Q9UKL2 312 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 SIPA1L1O43166 1804 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 NXPH3O95157 252 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 WDPCPO95876 746 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 ADPRHP54922 357 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 BDH1Q02338 343 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 PARM1Q6UWI2 310 aa16.3■□□□□ 0.2
ATPAF1-214ENST00000576409 SYS1Q8N2H4 156 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms